RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 SKIDA1Q1XH10 827 aa9.62□□□□□ -0.87
APOB-201ENST00000233242 TBC1D32Q96NH3 1257 aa9.62□□□□□ -0.87
APOB-201ENST00000233242 EHBP1Q8NDI1 1231 aa9.62□□□□□ -0.87
APOB-201ENST00000233242 SMARCA4P51532 1647 aa9.61□□□□□ -0.87
APOB-201ENST00000233242 CEBPZQ03701 1054 aaKnown RBP9.61□□□□□ -0.87
APOB-201ENST00000233242 SPA17Q15506 151 aa9.61□□□□□ -0.87
APOB-201ENST00000233242 ABCC11Q96J66 1382 aa9.61□□□□□ -0.87
APOB-201ENST00000233242 SMARCC1Q92922 1105 aaPredicted RBP9.61□□□□□ -0.87
APOB-201ENST00000233242 FEZ1Q99689 392 aa9.61□□□□□ -0.87
APOB-201ENST00000233242 KIAA1107Q9UPP5 1409 aa9.61□□□□□ -0.87
APOB-201ENST00000233242 STX1AQ16623 288 aa9.61□□□□□ -0.87
APOB-201ENST00000233242 FAM177A1Q8N128 213 aaPredicted RBP9.61□□□□□ -0.87
APOB-201ENST00000233242 MPNDQ8N594 471 aa9.61□□□□□ -0.87
APOB-201ENST00000233242 RBM25P49756 843 aaKnown RBP9.61□□□□□ -0.87
APOB-201ENST00000233242 GTF2A1P52655 376 aaPredicted RBP9.61□□□□□ -0.87
APOB-201ENST00000233242 CCDC91Q7Z6B0 441 aa9.61□□□□□ -0.87
APOB-201ENST00000233242 RIC3Q7Z5B4 369 aa9.61□□□□□ -0.87
APOB-201ENST00000233242 ADCY5O95622 1261 aa9.61□□□□□ -0.87
APOB-201ENST00000233242 SMC1AQ14683 1233 aaKnown RBP9.61□□□□□ -0.87
APOB-201ENST00000233242 C16orf45Q96MC5 204 aaPredicted RBP9.61□□□□□ -0.87
APOB-201ENST00000233242 ALDH1L2Q3SY69 923 aa9.61□□□□□ -0.87
APOB-201ENST00000233242 ZFYVE27Q5T4F4 411 aa9.61□□□□□ -0.87
APOB-201ENST00000233242 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.61□□□□□ -0.87
APOB-201ENST00000233242 TOP1P11387 765 aaKnown RBP9.6□□□□□ -0.87
APOB-201ENST00000233242 LRPPRCP42704 1394 aaKnown RBP9.6□□□□□ -0.87
APOB-201ENST00000233242 TERF1P54274 439 aa9.6□□□□□ -0.87
APOB-201ENST00000233242 NACAP1Q9BZK3 213 aa9.6□□□□□ -0.87
APOB-201ENST00000233242 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.6□□□□□ -0.87
APOB-201ENST00000233242 TUBBP07437 444 aa9.6□□□□□ -0.87
APOB-201ENST00000233242 BMP2KLQ5H9B9 411 aa9.6□□□□□ -0.87
APOB-201ENST00000233242 DNAAF4Q8WXU2 420 aa9.6□□□□□ -0.87
APOB-201ENST00000233242 PHAXQ9H814 394 aaKnown RBP9.6□□□□□ -0.87
APOB-201ENST00000233242 GPRASP1Q5JY77 1395 aa9.6□□□□□ -0.87
APOB-201ENST00000233242 KIF20AO95235 890 aa9.6□□□□□ -0.87
APOB-201ENST00000233242 TAX1BP1Q86VP1 789 aa9.6□□□□□ -0.87
APOB-201ENST00000233242 JAKMIP1Q96N16 626 aaKnown RBP9.6□□□□□ -0.87
APOB-201ENST00000233242 MNAT1P51948 309 aa9.6□□□□□ -0.87
APOB-201ENST00000233242 URI1O94763 535 aaPredicted RBP9.6□□□□□ -0.87
APOB-201ENST00000233242 XRCC6P12956 609 aaKnown RBP eCLIP9.6□□□□□ -0.877e-9■■■■□ 23.2
APOB-201ENST00000233242 UBE2HP62256 183 aa9.6□□□□□ -0.87
APOB-201ENST00000233242 IRX3P78415 501 aaPredicted RBP9.6□□□□□ -0.87
APOB-201ENST00000233242 SPECC1LQ69YQ0 1117 aa9.6□□□□□ -0.87
APOB-201ENST00000233242 KIF4BQ2VIQ3 1234 aa9.6□□□□□ -0.87
APOB-201ENST00000233242 CTDP1Q9Y5B0 961 aaPredicted RBP9.59□□□□□ -0.87
APOB-201ENST00000233242 CEP135Q66GS9 1140 aa9.59□□□□□ -0.87
APOB-201ENST00000233242 CCDC175P0C221 793 aa9.59□□□□□ -0.87
APOB-201ENST00000233242 PRKAR2BP31323 418 aa9.59□□□□□ -0.87
APOB-201ENST00000233242 USP25Q9UHP3 1055 aa9.59□□□□□ -0.87
APOB-201ENST00000233242 HMOX1P09601 288 aa9.59□□□□□ -0.87
APOB-201ENST00000233242 CCDC57Q2TAC2 916 aa9.59□□□□□ -0.87
APOB-201ENST00000233242 BBXQ8WY36 941 aaPredicted RBP9.59□□□□□ -0.87
APOB-201ENST00000233242 NUTM2DQ5VT03 806 aaPredicted RBP9.59□□□□□ -0.87
APOB-201ENST00000233242 V9GYY5 206 aaPredicted RBP9.59□□□□□ -0.87
APOB-201ENST00000233242 MAP2K1Q02750 393 aaPredicted RBP9.59□□□□□ -0.87
APOB-201ENST00000233242 ZKSCAN5Q9Y2L8 839 aa9.59□□□□□ -0.87
APOB-201ENST00000233242 NAA15Q9BXJ9 866 aaKnown RBP9.59□□□□□ -0.87
APOB-201ENST00000233242 ERBINQ96RT1 1412 aa9.59□□□□□ -0.87
APOB-201ENST00000233242 BMP2KQ9NSY1 1161 aaPredicted RBP9.59□□□□□ -0.87
APOB-201ENST00000233242 CASTP20810 708 aaKnown RBP9.58□□□□□ -0.88
APOB-201ENST00000233242 GIGYF2Q6Y7W6 1299 aaKnown RBP9.58□□□□□ -0.88
APOB-201ENST00000233242 ARFGAP3Q9NP61 516 aa9.58□□□□□ -0.88
APOB-201ENST00000233242 GCOM1H8Y6P7 765 aaPredicted RBP9.58□□□□□ -0.88
APOB-201ENST00000233242 MYZAPP0CAP1 466 aa9.58□□□□□ -0.88
APOB-201ENST00000233242 EIF5P55010 431 aaKnown RBP9.58□□□□□ -0.88
APOB-201ENST00000233242 BAG4O95429 457 aaKnown RBP9.58□□□□□ -0.88
APOB-201ENST00000233242 LMAN1P49257 510 aa9.58□□□□□ -0.88
APOB-201ENST00000233242 VPS36Q86VN1 386 aa9.58□□□□□ -0.88
APOB-201ENST00000233242 NECTIN2Q92692 538 aa9.58□□□□□ -0.88
APOB-201ENST00000233242 RAB11FIP3O75154 756 aa9.58□□□□□ -0.88
APOB-201ENST00000233242 LRSAM1Q6UWE0 723 aa9.58□□□□□ -0.88
APOB-201ENST00000233242 LIMCH1Q9UPQ0 1083 aa9.58□□□□□ -0.88
APOB-201ENST00000233242 SNW1Q13573 536 aaKnown RBP9.58□□□□□ -0.88
APOB-201ENST00000233242 ALS2CR12Q96Q35 445 aa9.58□□□□□ -0.88
APOB-201ENST00000233242 USO1O60763 962 aaKnown RBP9.58□□□□□ -0.88
APOB-201ENST00000233242 NF2P35240 595 aa9.58□□□□□ -0.88
APOB-201ENST00000233242 ZSCAN25Q6NSZ9 544 aa9.58□□□□□ -0.88
APOB-201ENST00000233242 MAPK8IP2Q13387 824 aaPredicted RBP9.58□□□□□ -0.88
APOB-201ENST00000233242 CCDC158Q5M9N0 1113 aa9.58□□□□□ -0.88
APOB-201ENST00000233242 FCHSD2O94868 740 aa9.58□□□□□ -0.88
APOB-201ENST00000233242 ZSCAN23Q3MJ62 389 aa9.57□□□□□ -0.88
APOB-201ENST00000233242 EFCAB5A4FU69 1503 aa9.57□□□□□ -0.88
APOB-201ENST00000233242 ANKRD30BQ9BXX2 1392 aa9.57□□□□□ -0.88
APOB-201ENST00000233242 KRT18P05783 430 aaKnown RBP9.57□□□□□ -0.88
APOB-201ENST00000233242 HMGB1P09429 215 aaKnown RBP9.57□□□□□ -0.88
APOB-201ENST00000233242 ATP2B1P20020 1258 aa9.57□□□□□ -0.88
APOB-201ENST00000233242 SSFA2P28290 1259 aa9.57□□□□□ -0.88
APOB-201ENST00000233242 PAFAH1B1P43034 410 aa9.57□□□□□ -0.88
APOB-201ENST00000233242 C1orf115Q9H7X2 142 aa9.57□□□□□ -0.88
APOB-201ENST00000233242 JPH4Q96JJ6 628 aa9.57□□□□□ -0.88
APOB-201ENST00000233242 EHBP1L1Q8N3D4 1523 aa9.57□□□□□ -0.88
APOB-201ENST00000233242 FGFR1OPO95684 399 aaKnown RBP9.57□□□□□ -0.88
APOB-201ENST00000233242 U3KPZ7 1027 aaPredicted RBP9.57□□□□□ -0.88
APOB-201ENST00000233242 YEATS4O95619 227 aa9.57□□□□□ -0.88
APOB-201ENST00000233242 IGF1RP08069 1367 aa9.57□□□□□ -0.88
APOB-201ENST00000233242 GNL3LQ9NVN8 582 aaKnown RBP9.57□□□□□ -0.88
APOB-201ENST00000233242 NOLC1Q14978 699 aaKnown RBP eCLIP9.57□□□□□ -0.882e-39■■□□□ 12.7
APOB-201ENST00000233242 TSR2Q969E8 191 aaKnown RBP9.57□□□□□ -0.88
APOB-201ENST00000233242 SLC4A2P04920 1241 aa9.57□□□□□ -0.88
APOB-201ENST00000233242 OGFRQ9NZT2 677 aa9.57□□□□□ -0.88
APOB-201ENST00000233242 CETN2P41208 172 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms