RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 PDGFDQ9GZP0 370 aaPredicted RBP14.02□□□□□ -0.17
CDCA3-201ENST00000229265 ZNF521Q96K83 1311 aa14.01□□□□□ -0.17
CDCA3-201ENST00000229265 CCDC27Q2M243 656 aa14.01□□□□□ -0.17
CDCA3-201ENST00000229265 TRMT2AQ8IZ69 625 aaKnown RBP14.01□□□□□ -0.17
CDCA3-201ENST00000229265 CARD10Q9BWT7 1032 aa14.01□□□□□ -0.17
CDCA3-201ENST00000229265 ABCC6O95255 1503 aa14□□□□□ -0.17
CDCA3-201ENST00000229265 MTHFSP49914 203 aa14□□□□□ -0.17
CDCA3-201ENST00000229265 ANKRD24Q8TF21 1146 aa14□□□□□ -0.17
CDCA3-201ENST00000229265 RUNDC1Q96C34 613 aa14□□□□□ -0.17
CDCA3-201ENST00000229265 LTV1Q96GA3 475 aaPredicted RBP14□□□□□ -0.17
CDCA3-201ENST00000229265 MEGF6O75095 1541 aa14□□□□□ -0.17
CDCA3-201ENST00000229265 R3HDM1Q15032 1099 aaKnown RBP13.99□□□□□ -0.17
CDCA3-201ENST00000229265 KCNH5Q8NCM2 988 aa13.99□□□□□ -0.17
CDCA3-201ENST00000229265 ANO8Q9HCE9 1232 aaPredicted RBP13.99□□□□□ -0.17
CDCA3-201ENST00000229265 RCAN3Q9UKA8 241 aa13.99□□□□□ -0.17
CDCA3-201ENST00000229265 THRAP3Q9Y2W1 955 aaKnown RBP13.99□□□□□ -0.17
CDCA3-201ENST00000229265 APBA3O96018 575 aa13.98□□□□□ -0.17
CDCA3-201ENST00000229265 HOXC9P31274 260 aa13.98□□□□□ -0.17
CDCA3-201ENST00000229265 FAM196AQ6ZSG2 479 aa13.98□□□□□ -0.17
CDCA3-201ENST00000229265 WDR63Q8IWG1 891 aa13.98□□□□□ -0.17
CDCA3-201ENST00000229265 USHBP1Q8N6Y0 703 aa13.98□□□□□ -0.17
CDCA3-201ENST00000229265 TNS2Q63HR2 1409 aa13.98□□□□□ -0.17
CDCA3-201ENST00000229265 E9PSI1 815 aa13.97□□□□□ -0.17
CDCA3-201ENST00000229265 IP6K1Q92551 441 aa13.97□□□□□ -0.17
CDCA3-201ENST00000229265 ANKRD26Q9UPS8 1709 aa13.97□□□□□ -0.17
CDCA3-201ENST00000229265 NHSQ6T4R5 1651 aa13.97□□□□□ -0.17
CDCA3-201ENST00000229265 CSB-PGBD3P0DP91 1061 aa13.96□□□□□ -0.17
CDCA3-201ENST00000229265 SLFN5Q08AF3 891 aa13.96□□□□□ -0.17
CDCA3-201ENST00000229265 DDB1Q16531 1140 aa13.96□□□□□ -0.17
CDCA3-201ENST00000229265 NLRP2Q9NX02 1062 aa13.96□□□□□ -0.17
CDCA3-201ENST00000229265 EMILIN1Q9Y6C2 1016 aa13.96□□□□□ -0.17
CDCA3-201ENST00000229265 BTAF1O14981 1849 aa13.96□□□□□ -0.17
CDCA3-201ENST00000229265 LRP5O75197 1615 aa13.95□□□□□ -0.18
CDCA3-201ENST00000229265 BAG6P46379 1132 aa13.95□□□□□ -0.18
CDCA3-201ENST00000229265 HSP90AB2PQ58FF8 381 aa13.95□□□□□ -0.18
CDCA3-201ENST00000229265 NBPF6Q5VWK0 638 aa13.95□□□□□ -0.18
CDCA3-201ENST00000229265 ACSBG1Q96GR2 724 aa13.95□□□□□ -0.18
CDCA3-201ENST00000229265 NBPF4Q96M43 638 aa13.95□□□□□ -0.18
CDCA3-201ENST00000229265 OVOS2A0A0G2JMS6 1433 aa13.95□□□□□ -0.18
CDCA3-201ENST00000229265 MAP2P11137 1827 aaKnown RBP13.94□□□□□ -0.18
CDCA3-201ENST00000229265 CASZ1Q86V15 1759 aa13.94□□□□□ -0.18
CDCA3-201ENST00000229265 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.94□□□□□ -0.18
CDCA3-201ENST00000229265 DOT1LQ8TEK3 1739 aa13.94□□□□□ -0.18
CDCA3-201ENST00000229265 TOGARAM1Q9Y4F4 1720 aa13.94□□□□□ -0.18
CDCA3-201ENST00000229265 APAF1O14727 1248 aa13.93□□□□□ -0.18
CDCA3-201ENST00000229265 FCHSD2O94868 740 aa13.93□□□□□ -0.18
CDCA3-201ENST00000229265 DUSP27Q5VZP5 1158 aa13.93□□□□□ -0.18
CDCA3-201ENST00000229265 RGPD3A6NKT7 1758 aaPredicted RBP13.93□□□□□ -0.18
CDCA3-201ENST00000229265 RGPD4Q7Z3J3 1758 aa13.93□□□□□ -0.18
CDCA3-201ENST00000229265 PAPPAQ13219 1627 aa13.93□□□□□ -0.18
CDCA3-201ENST00000229265 KCNQ4P56696 695 aa13.92□□□□□ -0.18
CDCA3-201ENST00000229265 SF3B2Q13435 895 aaKnown RBP13.92□□□□□ -0.18
CDCA3-201ENST00000229265 BCL9O00512 1426 aa13.91□□□□□ -0.18
CDCA3-201ENST00000229265 CT47B1P0C2W7 299 aaPredicted RBP13.91□□□□□ -0.18
CDCA3-201ENST00000229265 RRP1P56182 461 aaKnown RBP13.91□□□□□ -0.18
CDCA3-201ENST00000229265 COG3Q96JB2 828 aa13.91□□□□□ -0.18
CDCA3-201ENST00000229265 TUBGCP6Q96RT7 1819 aa13.91□□□□□ -0.18
CDCA3-201ENST00000229265 DIAPH1O60610 1272 aaKnown RBP13.9□□□□□ -0.18
CDCA3-201ENST00000229265 WWC1Q8IX03 1113 aa13.9□□□□□ -0.18
CDCA3-201ENST00000229265 CDCA7LQ96GN5 454 aa13.9□□□□□ -0.18
CDCA3-201ENST00000229265 IL2RBP14784 551 aa13.89□□□□□ -0.19
CDCA3-201ENST00000229265 AAMPQ13685 434 aa13.89□□□□□ -0.19
CDCA3-201ENST00000229265 LRRC4BQ9NT99 713 aa13.89□□□□□ -0.19
CDCA3-201ENST00000229265 BCL11BQ9C0K0 894 aaPredicted RBP13.88□□□□□ -0.19
CDCA3-201ENST00000229265 NCAPD2Q15021 1401 aa13.88□□□□□ -0.19
CDCA3-201ENST00000229265 IL16Q14005 1332 aa13.88□□□□□ -0.19
CDCA3-201ENST00000229265 EXOC5O00471 708 aa13.87□□□□□ -0.19
CDCA3-201ENST00000229265 NEFMP07197 916 aa13.87□□□□□ -0.19
CDCA3-201ENST00000229265 U2AF1L5P0DN76 240 aaPredicted RBP13.87□□□□□ -0.19
CDCA3-201ENST00000229265 AMPHP49418 695 aa13.87□□□□□ -0.19
CDCA3-201ENST00000229265 U2AF1Q01081 240 aaKnown RBP eCLIP13.87□□□□□ -0.19
CDCA3-201ENST00000229265 POLKQ9UBT6 870 aa13.87□□□□□ -0.19
CDCA3-201ENST00000229265 SALL2Q9Y467 1007 aaPredicted RBP13.87□□□□□ -0.19
CDCA3-201ENST00000229265 KAT6BQ8WYB5 2073 aa13.87□□□□□ -0.19
CDCA3-201ENST00000229265 TNNT2P45379 298 aaPredicted RBP13.86□□□□□ -0.19
CDCA3-201ENST00000229265 ZNF827Q17R98 1081 aa13.86□□□□□ -0.19
CDCA3-201ENST00000229265 DDX54Q8TDD1 881 aaKnown RBP13.86□□□□□ -0.19
CDCA3-201ENST00000229265 PLEKHF1Q96S99 279 aa13.86□□□□□ -0.19
CDCA3-201ENST00000229265 PKD1L3Q7Z443 1732 aa13.86□□□□□ -0.19
CDCA3-201ENST00000229265 MYH16Q9H6N6 1097 aa13.85□□□□□ -0.19
CDCA3-201ENST00000229265 ITGB4P16144 1822 aa13.85□□□□□ -0.19
CDCA3-201ENST00000229265 RTL1A6NKG5 1358 aa13.84□□□□□ -0.19
CDCA3-201ENST00000229265 LY75O60449 1722 aa13.84□□□□□ -0.19
CDCA3-201ENST00000229265 PLSCR1O15162 318 aa13.84□□□□□ -0.19
CDCA3-201ENST00000229265 TXNRD1Q16881 649 aa13.84□□□□□ -0.19
CDCA3-201ENST00000229265 CCDC146Q8IYE0 955 aa13.84□□□□□ -0.19
CDCA3-201ENST00000229265 CYP27B1O15528 508 aa13.83□□□□□ -0.2
CDCA3-201ENST00000229265 CALD1Q05682 793 aaKnown RBP13.83□□□□□ -0.2
CDCA3-201ENST00000229265 SMIM5Q71RC9 77 aa13.83□□□□□ -0.2
CDCA3-201ENST00000229265 AMIGO3Q86WK7 504 aa13.83□□□□□ -0.2
CDCA3-201ENST00000229265 EYA1Q99502 592 aa13.83□□□□□ -0.2
CDCA3-201ENST00000229265 PRIM1P49642 420 aaKnown RBP13.82□□□□□ -0.2
CDCA3-201ENST00000229265 PDE3AQ14432 1141 aa13.82□□□□□ -0.2
CDCA3-201ENST00000229265 ZNF428Q96B54 188 aa13.82□□□□□ -0.2
CDCA3-201ENST00000229265 CCDC136Q96JN2 1154 aa13.82□□□□□ -0.2
CDCA3-201ENST00000229265 CDCA7Q9BWT1 371 aaPredicted RBP13.82□□□□□ -0.2
CDCA3-201ENST00000229265 FLT4P35916 1363 aa13.82□□□□□ -0.2
CDCA3-201ENST00000229265 PPM1GO15355 546 aaPredicted RBP13.81□□□□□ -0.2
CDCA3-201ENST00000229265 TMPOP42166 694 aaKnown RBP13.81□□□□□ -0.2
CDCA3-201ENST00000229265 MAPK8IP3Q9UPT6 1336 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms