RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 ASXL1Q8IXJ9 1541 aa16.44■□□□□ 0.22
NFKB1-201ENST00000226574 FAM177BA6PVY3 158 aa16.43■□□□□ 0.22
NFKB1-201ENST00000226574 TTC22Q5TAA0 569 aa16.43■□□□□ 0.22
NFKB1-201ENST00000226574 TMX3Q96JJ7 454 aa16.43■□□□□ 0.22
NFKB1-201ENST00000226574 HSP90AB2PQ58FF8 381 aa16.43■□□□□ 0.22
NFKB1-201ENST00000226574 VAMP4O75379 141 aa16.42■□□□□ 0.22
NFKB1-201ENST00000226574 CCDC192P0DO97 292 aa16.42■□□□□ 0.22
NFKB1-201ENST00000226574 PDRG1Q9NUG6 133 aa16.42■□□□□ 0.22
NFKB1-201ENST00000226574 MAPK8IP2Q13387 824 aaPredicted RBP16.42■□□□□ 0.22
NFKB1-201ENST00000226574 TAF7Q15545 349 aaPredicted RBP16.42■□□□□ 0.22
NFKB1-201ENST00000226574 FAM177A1Q8N128 213 aaPredicted RBP16.42■□□□□ 0.22
NFKB1-201ENST00000226574 MAP7D2Q96T17 732 aa16.42■□□□□ 0.22
NFKB1-201ENST00000226574 KRT85P78386 507 aa16.41■□□□□ 0.22
NFKB1-201ENST00000226574 BOLA2Q9H3K6 86 aa16.41■□□□□ 0.22
NFKB1-201ENST00000226574 FAM135AQ9P2D6 1515 aa16.41■□□□□ 0.22
NFKB1-201ENST00000226574 GIMAP6Q6P9H5 292 aa16.41■□□□□ 0.22
NFKB1-201ENST00000226574 UBE2Q2Q8WVN8 375 aa16.41■□□□□ 0.22
NFKB1-201ENST00000226574 CCDC8Q9H0W5 538 aaPredicted RBP16.41■□□□□ 0.22
NFKB1-201ENST00000226574 TTC12Q9H892 705 aaPredicted RBP16.41■□□□□ 0.22
NFKB1-201ENST00000226574 SMC2O95347 1197 aa16.4■□□□□ 0.22
NFKB1-201ENST00000226574 ZNF530Q6P9A1 599 aaPredicted RBP16.4■□□□□ 0.22
NFKB1-201ENST00000226574 CCDC85AQ96PX6 553 aaPredicted RBP16.4■□□□□ 0.22
NFKB1-201ENST00000226574 HMGN5P82970 282 aaKnown RBP16.4■□□□□ 0.22
NFKB1-201ENST00000226574 BLOC1S2Q6QNY1 142 aa16.4■□□□□ 0.22
NFKB1-201ENST00000226574 ZHX1Q9UKY1 873 aaPredicted RBP16.4■□□□□ 0.22
NFKB1-201ENST00000226574 KINO60870 393 aaKnown RBP16.4■□□□□ 0.22
NFKB1-201ENST00000226574 SYNE3Q6ZMZ3 975 aa16.4■□□□□ 0.22
NFKB1-201ENST00000226574 POLKQ9UBT6 870 aa16.4■□□□□ 0.22
NFKB1-201ENST00000226574 RAB3GAP1Q15042 981 aa16.4■□□□□ 0.22
NFKB1-201ENST00000226574 TTLL5Q6EMB2 1281 aa16.4■□□□□ 0.22
NFKB1-201ENST00000226574 PSMA5P28066 241 aa16.39■□□□□ 0.21
NFKB1-201ENST00000226574 ME1P48163 572 aa16.39■□□□□ 0.21
NFKB1-201ENST00000226574 PDILTQ8N807 584 aa16.39■□□□□ 0.21
NFKB1-201ENST00000226574 KIF14Q15058 1648 aa16.39■□□□□ 0.21
NFKB1-201ENST00000226574 A2MP01023 1474 aa16.39■□□□□ 0.21
NFKB1-201ENST00000226574 MRPL50Q8N5N7 158 aaKnown RBP16.39■□□□□ 0.21
NFKB1-201ENST00000226574 SPATA32Q96LK8 384 aa16.39■□□□□ 0.21
NFKB1-201ENST00000226574 RPGRIP1LQ68CZ1 1315 aa16.39■□□□□ 0.21
NFKB1-201ENST00000226574 GUCY1B3Q02153 619 aa16.39■□□□□ 0.21
NFKB1-201ENST00000226574 JARID2Q92833 1246 aaPredicted RBP16.39■□□□□ 0.21
NFKB1-201ENST00000226574 ABCC11Q96J66 1382 aa16.38■□□□□ 0.21
NFKB1-201ENST00000226574 PDCP20941 246 aa16.38■□□□□ 0.21
NFKB1-201ENST00000226574 FLIIQ13045 1269 aa16.38■□□□□ 0.21
NFKB1-201ENST00000226574 NECAB1Q8N987 351 aa16.38■□□□□ 0.21
NFKB1-201ENST00000226574 RAPGEF4Q8WZA2 1011 aa16.38■□□□□ 0.21
NFKB1-201ENST00000226574 ZNF692Q9BU19 519 aaPredicted RBP16.38■□□□□ 0.21
NFKB1-201ENST00000226574 POLR3AO14802 1390 aaPredicted RBP16.38■□□□□ 0.21
NFKB1-201ENST00000226574 SPDYE4A6NLX3 237 aa16.38■□□□□ 0.21
NFKB1-201ENST00000226574 FOXO3O43524 673 aa16.38■□□□□ 0.21
NFKB1-201ENST00000226574 ESCO1Q5FWF5 840 aa16.38■□□□□ 0.21
NFKB1-201ENST00000226574 NFXL1Q6ZNB6 911 aa16.38■□□□□ 0.21
NFKB1-201ENST00000226574 PLEKHM2Q8IWE5 1019 aa16.38■□□□□ 0.21
NFKB1-201ENST00000226574 NUP62CLQ9H1M0 184 aa16.38■□□□□ 0.21
NFKB1-201ENST00000226574 ADCY5O95622 1261 aa16.37■□□□□ 0.21
NFKB1-201ENST00000226574 GAS2L3Q86XJ1 694 aa16.37■□□□□ 0.21
NFKB1-201ENST00000226574 SYTL4Q96C24 671 aaPredicted RBP16.37■□□□□ 0.21
NFKB1-201ENST00000226574 TRIM35Q9UPQ4 493 aa16.37■□□□□ 0.21
NFKB1-201ENST00000226574 TRAPPC8Q9Y2L5 1435 aa16.37■□□□□ 0.21
NFKB1-201ENST00000226574 COL17A1Q9UMD9 1497 aaPredicted RBP16.37■□□□□ 0.21
NFKB1-201ENST00000226574 ZBTB7BO15156 539 aaPredicted RBP16.37■□□□□ 0.21
NFKB1-201ENST00000226574 PDE1AP54750 535 aa16.37■□□□□ 0.21
NFKB1-201ENST00000226574 PDE4CQ08493 712 aa16.36■□□□□ 0.21
NFKB1-201ENST00000226574 C16orf45Q96MC5 204 aaPredicted RBP16.36■□□□□ 0.21
NFKB1-201ENST00000226574 IGSF3O75054 1194 aa16.36■□□□□ 0.21
NFKB1-201ENST00000226574 RAB11FIP3O75154 756 aa16.36■□□□□ 0.21
NFKB1-201ENST00000226574 CPA1P15085 419 aa16.36■□□□□ 0.21
NFKB1-201ENST00000226574 RALYLQ86SE5 291 aaKnown RBP16.36■□□□□ 0.21
NFKB1-201ENST00000226574 TRDNQ13061 729 aa16.36■□□□□ 0.21
NFKB1-201ENST00000226574 PKP1Q13835 747 aa16.35■□□□□ 0.21
NFKB1-201ENST00000226574 SKIDA1Q1XH10 827 aa16.35■□□□□ 0.21
NFKB1-201ENST00000226574 CPLX2Q6PUV4 134 aaKnown RBP16.35■□□□□ 0.21
NFKB1-201ENST00000226574 MNS1Q8NEH6 495 aa16.35■□□□□ 0.21
NFKB1-201ENST00000226574 SNX21Q969T3 373 aa16.35■□□□□ 0.21
NFKB1-201ENST00000226574 SYCP2Q9BX26 1530 aa16.35■□□□□ 0.21
NFKB1-201ENST00000226574 PDCL3Q9H2J4 239 aa16.35■□□□□ 0.21
NFKB1-201ENST00000226574 CNPY2Q9Y2B0 182 aa16.35■□□□□ 0.21
NFKB1-201ENST00000226574 RBSNQ9H1K0 784 aa16.35■□□□□ 0.21
NFKB1-201ENST00000226574 UHRF1BP1Q6BDS2 1440 aa16.35■□□□□ 0.21
NFKB1-201ENST00000226574 LETM1O95202 739 aaPredicted RBP16.35■□□□□ 0.21
NFKB1-201ENST00000226574 PPP1R42Q7Z4L9 355 aa16.35■□□□□ 0.21
NFKB1-201ENST00000226574 CCDC112Q8NEF3 446 aa16.35■□□□□ 0.21
NFKB1-201ENST00000226574 CHMP4CQ96CF2 233 aa16.35■□□□□ 0.21
NFKB1-201ENST00000226574 MTERF4Q7Z6M4 381 aaKnown RBP16.34■□□□□ 0.21
NFKB1-201ENST00000226574 TRMT1Q9NXH9 659 aaKnown RBP16.34■□□□□ 0.21
NFKB1-201ENST00000226574 LAMC3Q9Y6N6 1575 aa16.34■□□□□ 0.21
NFKB1-201ENST00000226574 MPRIPQ6WCQ1 1025 aa16.34■□□□□ 0.21
NFKB1-201ENST00000226574 ANKRD44Q8N8A2 993 aa16.34■□□□□ 0.21
NFKB1-201ENST00000226574 PIK3C2GO75747 1445 aa16.34■□□□□ 0.21
NFKB1-201ENST00000226574 WASLO00401 505 aaPredicted RBP16.33■□□□□ 0.21
NFKB1-201ENST00000226574 TRIM29Q14134 588 aa16.33■□□□□ 0.21
NFKB1-201ENST00000226574 STK38Q15208 465 aa16.33■□□□□ 0.21
NFKB1-201ENST00000226574 KIF1BPQ96EK5 621 aa16.33■□□□□ 0.21
NFKB1-201ENST00000226574 GNAT3A8MTJ3 354 aa16.33■□□□□ 0.2
NFKB1-201ENST00000226574 USP48Q86UV5 1035 aa16.33■□□□□ 0.2
NFKB1-201ENST00000226574 PDCL2Q8N4E4 241 aa16.33■□□□□ 0.2
NFKB1-201ENST00000226574 CD2BP2O95400 341 aaKnown RBP16.33■□□□□ 0.2
NFKB1-201ENST00000226574 MAP3K11Q16584 847 aa16.33■□□□□ 0.2
NFKB1-201ENST00000226574 MTMR7Q9Y216 660 aa16.33■□□□□ 0.2
NFKB1-201ENST00000226574 PI4KAP2A4QPH2 592 aa16.32■□□□□ 0.2
NFKB1-201ENST00000226574 BTBD11A6QL63 1104 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms