RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 PPP2R1AP30153 589 aa22.16■■□□□ 1.14
LIM2-201ENST00000221973 SPON1Q9HCB6 807 aa22.16■■□□□ 1.14
LIM2-201ENST00000221973 MAP3K19Q56UN5 1328 aa22.15■■□□□ 1.14
LIM2-201ENST00000221973 PPM1GO15355 546 aaPredicted RBP22.15■■□□□ 1.14
LIM2-201ENST00000221973 POLKQ9UBT6 870 aa22.15■■□□□ 1.14
LIM2-201ENST00000221973 EMILIN1Q9Y6C2 1016 aa22.15■■□□□ 1.14
LIM2-201ENST00000221973 ACSBG1Q96GR2 724 aa22.14■■□□□ 1.13
LIM2-201ENST00000221973 MYBBP1AQ9BQG0 1328 aaKnown RBP22.12■■□□□ 1.13
LIM2-201ENST00000221973 AMPHP49418 695 aa22.12■■□□□ 1.13
LIM2-201ENST00000221973 MTHFSP49914 203 aa22.12■■□□□ 1.13
LIM2-201ENST00000221973 FAM208AQ9UK61 1670 aaKnown RBP22.11■■□□□ 1.13
LIM2-201ENST00000221973 HOXC9P31274 260 aa22.11■■□□□ 1.13
LIM2-201ENST00000221973 LTV1Q96GA3 475 aaPredicted RBP22.1■■□□□ 1.13
LIM2-201ENST00000221973 BTAF1O14981 1849 aa22.1■■□□□ 1.13
LIM2-201ENST00000221973 PAPPAQ13219 1627 aa22.09■■□□□ 1.13
LIM2-201ENST00000221973 SLC15A2Q16348 729 aa22.09■■□□□ 1.13
LIM2-201ENST00000221973 RGPD2P0DJD1 1756 aa22.09■■□□□ 1.13
LIM2-201ENST00000221973 UTRNP46939 3433 aa22.08■■□□□ 1.13
LIM2-201ENST00000221973 PTGER2P43116 358 aa22.07■■□□□ 1.12
LIM2-201ENST00000221973 SMG6Q86US8 1419 aaKnown RBP22.06■■□□□ 1.12
LIM2-201ENST00000221973 ZBTB7AO95365 584 aa22.06■■□□□ 1.12
LIM2-201ENST00000221973 HSP90AB2PQ58FF8 381 aa22.06■■□□□ 1.12
LIM2-201ENST00000221973 STK32BQ9NY57 414 aa22.06■■□□□ 1.12
LIM2-201ENST00000221973 PPP1R1BQ9UD71 204 aaPredicted RBP22.06■■□□□ 1.12
LIM2-201ENST00000221973 FLT4P35916 1363 aa22.06■■□□□ 1.12
LIM2-201ENST00000221973 SHANK3Q9BYB0 1731 aa22.06■■□□□ 1.12
LIM2-201ENST00000221973 RTL1A6NKG5 1358 aa22.05■■□□□ 1.12
LIM2-201ENST00000221973 MIER1Q8N108 512 aa22.05■■□□□ 1.12
LIM2-201ENST00000221973 LRRC4BQ9NT99 713 aa22.05■■□□□ 1.12
LIM2-201ENST00000221973 KIF24Q5T7B8 1368 aa22.04■■□□□ 1.12
LIM2-201ENST00000221973 DDX54Q8TDD1 881 aaKnown RBP22.04■■□□□ 1.12
LIM2-201ENST00000221973 MEGF6O75095 1541 aa22.04■■□□□ 1.12
LIM2-201ENST00000221973 CFAP53Q96M91 514 aa22.03■■□□□ 1.12
LIM2-201ENST00000221973 KAT6BQ8WYB5 2073 aa22.03■■□□□ 1.12
LIM2-201ENST00000221973 SGIP1Q9BQI5 828 aa22.02■■□□□ 1.12
LIM2-201ENST00000221973 ATF5Q9Y2D1 282 aaPredicted RBP22.02■■□□□ 1.12
LIM2-201ENST00000221973 MAP2P11137 1827 aaKnown RBP22.01■■□□□ 1.11
LIM2-201ENST00000221973 INSRP06213 1382 aa22.01■■□□□ 1.11
LIM2-201ENST00000221973 ZNF827Q17R98 1081 aa22.01■■□□□ 1.11
LIM2-201ENST00000221973 NBPF6Q5VWK0 638 aa22.01■■□□□ 1.11
LIM2-201ENST00000221973 NBPF4Q96M43 638 aa22.01■■□□□ 1.11
LIM2-201ENST00000221973 CCDC184Q52MB2 194 aa21.99■■□□□ 1.11
LIM2-201ENST00000221973 ZCRB1Q8TBF4 217 aaKnown RBP21.99■■□□□ 1.11
LIM2-201ENST00000221973 DOT1LQ8TEK3 1739 aa21.98■■□□□ 1.11
LIM2-201ENST00000221973 EIF4A2Q14240 407 aaKnown RBP21.98■■□□□ 1.11
LIM2-201ENST00000221973 MTFR1LQ9H019 292 aa21.98■■□□□ 1.11
LIM2-201ENST00000221973 DIAPH1O60610 1272 aaKnown RBP21.97■■□□□ 1.11
LIM2-201ENST00000221973 PRIM1P49642 420 aaKnown RBP21.97■■□□□ 1.11
LIM2-201ENST00000221973 USHBP1Q8N6Y0 703 aa21.97■■□□□ 1.11
LIM2-201ENST00000221973 AKT1S1Q96B36 256 aa21.97■■□□□ 1.11
LIM2-201ENST00000221973 MRS2Q9HD23 443 aa21.96■■□□□ 1.11
LIM2-201ENST00000221973 IL13P35225 146 aa21.95■■□□□ 1.1
LIM2-201ENST00000221973 COL3A1P02461 1466 aaPredicted RBP21.95■■□□□ 1.1
LIM2-201ENST00000221973 SLC27A3Q5K4L6 730 aa21.94■■□□□ 1.1
LIM2-201ENST00000221973 LY75O60449 1722 aa21.94■■□□□ 1.1
LIM2-201ENST00000221973 KCNQ4P56696 695 aa21.93■■□□□ 1.1
LIM2-201ENST00000221973 CCER2I3L3R5 266 aa21.92■■□□□ 1.1
LIM2-201ENST00000221973 U2SURPO15042 1029 aaKnown RBP21.92■■□□□ 1.1
LIM2-201ENST00000221973 YY1P25490 414 aa21.92■■□□□ 1.1
LIM2-201ENST00000221973 FHDC1Q9C0D6 1143 aaPredicted RBP21.92■■□□□ 1.1
LIM2-201ENST00000221973 QSER1Q2KHR3 1735 aa21.92■■□□□ 1.1
LIM2-201ENST00000221973 SYTL4Q96C24 671 aaPredicted RBP21.91■■□□□ 1.1
LIM2-201ENST00000221973 EYA1Q99502 592 aa21.91■■□□□ 1.1
LIM2-201ENST00000221973 SYT17Q9BSW7 474 aa21.91■■□□□ 1.1
LIM2-201ENST00000221973 NUDCQ9Y266 331 aa21.91■■□□□ 1.1
LIM2-201ENST00000221973 TUBGCP6Q96RT7 1819 aa21.91■■□□□ 1.1
LIM2-201ENST00000221973 GOLGB1Q14789 3259 aaKnown RBP21.9■■□□□ 1.1
LIM2-201ENST00000221973 PNPLA7Q6ZV29 1317 aa21.89■■□□□ 1.1
LIM2-201ENST00000221973 COL24A1Q17RW2 1714 aa21.89■■□□□ 1.09
LIM2-201ENST00000221973 NCAPD2Q15021 1401 aa21.89■■□□□ 1.09
LIM2-201ENST00000221973 RAPGEF4Q8WZA2 1011 aa21.88■■□□□ 1.09
LIM2-201ENST00000221973 U2AF1L5P0DN76 240 aaPredicted RBP21.87■■□□□ 1.09
LIM2-201ENST00000221973 U2AF1Q01081 240 aaKnown RBP eCLIP21.87■■□□□ 1.09
LIM2-201ENST00000221973 WDR43Q15061 677 aaKnown RBP eCLIP21.87■■□□□ 1.09
LIM2-201ENST00000221973 ARXQ96QS3 562 aa21.87■■□□□ 1.09
LIM2-201ENST00000221973 TATP17735 454 aaPredicted RBP21.86■■□□□ 1.09
LIM2-201ENST00000221973 MAP3K5Q99683 1374 aa21.86■■□□□ 1.09
LIM2-201ENST00000221973 IGSF1Q8N6C5 1336 aa21.85■■□□□ 1.09
LIM2-201ENST00000221973 CYP27B1O15528 508 aa21.85■■□□□ 1.09
LIM2-201ENST00000221973 HMOX1P09601 288 aa21.85■■□□□ 1.09
LIM2-201ENST00000221973 SULT6B1Q6IMI4 303 aa21.85■■□□□ 1.09
LIM2-201ENST00000221973 AEBP1Q8IUX7 1158 aa21.84■■□□□ 1.09
LIM2-201ENST00000221973 PNISRQ8TF01 805 aaKnown RBP21.84■■□□□ 1.09
LIM2-201ENST00000221973 SLC16A10Q8TF71 515 aa21.84■■□□□ 1.09
LIM2-201ENST00000221973 PKD1L3Q7Z443 1732 aa21.83■■□□□ 1.09
LIM2-201ENST00000221973 TOGARAM1Q9Y4F4 1720 aa21.83■■□□□ 1.09
LIM2-201ENST00000221973 PCDH11XQ9BZA7 1347 aa21.83■■□□□ 1.09
LIM2-201ENST00000221973 PCDH11YQ9BZA8 1340 aa21.83■■□□□ 1.09
LIM2-201ENST00000221973 DCAF8L1A6NGE4 600 aa21.83■■□□□ 1.09
LIM2-201ENST00000221973 CCNL1Q9UK58 526 aaPredicted RBP21.83■■□□□ 1.09
LIM2-201ENST00000221973 TFCP2L1Q9NZI6 479 aa21.82■■□□□ 1.08
LIM2-201ENST00000221973 FAM9BQ8IZU0 186 aa21.81■■□□□ 1.08
LIM2-201ENST00000221973 ADAMTS8Q9UP79 889 aa21.81■■□□□ 1.08
LIM2-201ENST00000221973 ITGB4P16144 1822 aa21.78■■□□□ 1.08
LIM2-201ENST00000221973 RSPH6AQ9H0K4 717 aa21.78■■□□□ 1.08
LIM2-201ENST00000221973 KDRP35968 1356 aa21.77■■□□□ 1.08
LIM2-201ENST00000221973 C5P01031 1676 aa21.77■■□□□ 1.08
LIM2-201ENST00000221973 FCHSD2O94868 740 aa21.77■■□□□ 1.08
LIM2-201ENST00000221973 NKX1-1Q15270 411 aaPredicted RBP21.77■■□□□ 1.08
LIM2-201ENST00000221973 COL23A1Q86Y22 540 aaPredicted RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms