RNA–Protein interactions for RNA: ENST00000221576.4

C19orf53-201, Transcript of chromosome 19 open reading frame 53, humanhuman

TSL 2

Gene C19orf53, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf53-201ENST00000221576 PNPLA7Q6ZV29 1317 aa8.58□□□□□ -1.04
C19orf53-201ENST00000221576 A0A1W2PP64 1363 aa8.58□□□□□ -1.04
C19orf53-201ENST00000221576 ANKRD36BQ8N2N9 1353 aa8.58□□□□□ -1.04
C19orf53-201ENST00000221576 SMG6Q86US8 1419 aaKnown RBP8.57□□□□□ -1.04
C19orf53-201ENST00000221576 TATP17735 454 aaPredicted RBP8.57□□□□□ -1.04
C19orf53-201ENST00000221576 HOXC9P31274 260 aa8.57□□□□□ -1.04
C19orf53-201ENST00000221576 MAP3K19Q56UN5 1328 aa8.56□□□□□ -1.04
C19orf53-201ENST00000221576 PAPPAQ13219 1627 aa8.56□□□□□ -1.04
C19orf53-201ENST00000221576 MSL1Q68DK7 614 aa8.56□□□□□ -1.04
C19orf53-201ENST00000221576 FLAD1Q8NFF5 587 aa8.56□□□□□ -1.04
C19orf53-201ENST00000221576 NLGN2Q8NFZ4 835 aa8.56□□□□□ -1.04
C19orf53-201ENST00000221576 PUS7Q96PZ0 661 aaKnown RBP8.56□□□□□ -1.04
C19orf53-201ENST00000221576 CGNL1Q0VF96 1302 aa8.55□□□□□ -1.04
C19orf53-201ENST00000221576 AK7Q96M32 723 aa8.55□□□□□ -1.04
C19orf53-201ENST00000221576 GPBP1L1Q9HC44 474 aaPredicted RBP8.55□□□□□ -1.04
C19orf53-201ENST00000221576 CD163L1Q9NR16 1453 aa8.55□□□□□ -1.04
C19orf53-201ENST00000221576 FAM208AQ9UK61 1670 aaKnown RBP8.55□□□□□ -1.04
C19orf53-201ENST00000221576 TMF1P82094 1093 aa8.54□□□□□ -1.04
C19orf53-201ENST00000221576 RRS1Q15050 365 aaKnown RBP8.54□□□□□ -1.04
C19orf53-201ENST00000221576 MPRIPQ6WCQ1 1025 aa8.54□□□□□ -1.04
C19orf53-201ENST00000221576 COL23A1Q86Y22 540 aaPredicted RBP8.54□□□□□ -1.04
C19orf53-201ENST00000221576 USHBP1Q8N6Y0 703 aa8.54□□□□□ -1.04
C19orf53-201ENST00000221576 PCDH11XQ9BZA7 1347 aa8.54□□□□□ -1.04
C19orf53-201ENST00000221576 PCDH11YQ9BZA8 1340 aa8.54□□□□□ -1.04
C19orf53-201ENST00000221576 USP54Q70EL1 1684 aa8.53□□□□□ -1.04
C19orf53-201ENST00000221576 ST20-MTHFSA0A0A6YYL1 179 aa8.53□□□□□ -1.04
C19orf53-201ENST00000221576 FBLN1P23142 703 aa8.53□□□□□ -1.04
C19orf53-201ENST00000221576 ZNF526Q8TF50 670 aaPredicted RBP8.53□□□□□ -1.04
C19orf53-201ENST00000221576 SMARCC1Q92922 1105 aaPredicted RBP8.53□□□□□ -1.04
C19orf53-201ENST00000221576 GGNBP2Q9H3C7 697 aa8.53□□□□□ -1.04
C19orf53-201ENST00000221576 CD2APQ9Y5K6 639 aa8.53□□□□□ -1.04
C19orf53-201ENST00000221576 DOT1LQ8TEK3 1739 aa8.52□□□□□ -1.05
C19orf53-201ENST00000221576 RTL1A6NKG5 1358 aa8.52□□□□□ -1.05
C19orf53-201ENST00000221576 PPM1GO15355 546 aaPredicted RBP8.52□□□□□ -1.05
C19orf53-201ENST00000221576 PHF14O94880 888 aa8.52□□□□□ -1.05
C19orf53-201ENST00000221576 YBX3P16989 372 aaKnown RBP eCLIP8.52□□□□□ -1.054e-9■□□□□ 11.2
C19orf53-201ENST00000221576 CDCA8Q53HL2 280 aa8.52□□□□□ -1.05
C19orf53-201ENST00000221576 NBPF6Q5VWK0 638 aa8.52□□□□□ -1.05
C19orf53-201ENST00000221576 NBPF4Q96M43 638 aa8.52□□□□□ -1.05
C19orf53-201ENST00000221576 QSER1Q2KHR3 1735 aa8.51□□□□□ -1.05
C19orf53-201ENST00000221576 PALLDQ8WX93 1383 aa8.51□□□□□ -1.05
C19orf53-201ENST00000221576 MEGF6O75095 1541 aa8.51□□□□□ -1.05
C19orf53-201ENST00000221576 WWC3Q9ULE0 1092 aa8.51□□□□□ -1.05
C19orf53-201ENST00000221576 NSD2O96028 1365 aa8.5□□□□□ -1.05
C19orf53-201ENST00000221576 NSD3Q9BZ95 1437 aa8.5□□□□□ -1.05
C19orf53-201ENST00000221576 ATP10DQ9P241 1426 aa8.5□□□□□ -1.05
C19orf53-201ENST00000221576 SPG7Q9UQ90 795 aa8.5□□□□□ -1.05
C19orf53-201ENST00000221576 FLT4P35916 1363 aa8.49□□□□□ -1.05
C19orf53-201ENST00000221576 FYB1O15117 783 aa8.49□□□□□ -1.05
C19orf53-201ENST00000221576 HSP90AB2PQ58FF8 381 aa8.49□□□□□ -1.05
C19orf53-201ENST00000221576 IFFO2Q5TF58 517 aa8.49□□□□□ -1.05
C19orf53-201ENST00000221576 TMOD3Q9NYL9 352 aa8.49□□□□□ -1.05
C19orf53-201ENST00000221576 IGSF1Q8N6C5 1336 aa8.49□□□□□ -1.05
C19orf53-201ENST00000221576 LY75O60449 1722 aa8.49□□□□□ -1.05
C19orf53-201ENST00000221576 INSRP06213 1382 aa8.48□□□□□ -1.05
C19orf53-201ENST00000221576 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.48□□□□□ -1.05
C19orf53-201ENST00000221576 TESK2Q96S53 571 aa8.48□□□□□ -1.05
C19orf53-201ENST00000221576 POLR3GLQ9BT43 218 aa8.48□□□□□ -1.05
C19orf53-201ENST00000221576 TUBGCP6Q96RT7 1819 aa8.47□□□□□ -1.05
C19orf53-201ENST00000221576 GNPATO15228 680 aa8.47□□□□□ -1.05
C19orf53-201ENST00000221576 HSPA6P17066 643 aa8.47□□□□□ -1.05
C19orf53-201ENST00000221576 SSFA2P28290 1259 aa8.47□□□□□ -1.05
C19orf53-201ENST00000221576 ATP6V1AP38606 617 aa8.47□□□□□ -1.05
C19orf53-201ENST00000221576 RGPD2P0DJD1 1756 aa8.47□□□□□ -1.05
C19orf53-201ENST00000221576 KIF24Q5T7B8 1368 aa8.47□□□□□ -1.05
C19orf53-201ENST00000221576 C5P01031 1676 aa8.46□□□□□ -1.05
C19orf53-201ENST00000221576 SHANK3Q9BYB0 1731 aa8.46□□□□□ -1.05
C19orf53-201ENST00000221576 LOC102724428A0A0B4J2F2 783 aa8.46□□□□□ -1.06
C19orf53-201ENST00000221576 CYP27B1O15528 508 aa8.46□□□□□ -1.06
C19orf53-201ENST00000221576 SIK1P57059 783 aa8.46□□□□□ -1.06
C19orf53-201ENST00000221576 PIGBQ92521 554 aa8.46□□□□□ -1.06
C19orf53-201ENST00000221576 TRAPPC3LQ5T215 181 aa8.45□□□□□ -1.06
C19orf53-201ENST00000221576 C16orf71Q8IYS4 520 aaPredicted RBP8.45□□□□□ -1.06
C19orf53-201ENST00000221576 IFNL2Q8IZJ0 200 aa8.45□□□□□ -1.06
C19orf53-201ENST00000221576 RBM42Q9BTD8 480 aaKnown RBP8.45□□□□□ -1.06
C19orf53-201ENST00000221576 BCS1LQ9Y276 419 aa8.45□□□□□ -1.06
C19orf53-201ENST00000221576 RTCBQ9Y3I0 505 aaKnown RBP8.45□□□□□ -1.06
C19orf53-201ENST00000221576 EMILIN1Q9Y6C2 1016 aa8.45□□□□□ -1.06
C19orf53-201ENST00000221576 COL24A1Q17RW2 1714 aa8.45□□□□□ -1.06
C19orf53-201ENST00000221576 C4BP0C0L5 1744 aa8.44□□□□□ -1.06
C19orf53-201ENST00000221576 MMP10P09238 476 aa8.44□□□□□ -1.06
C19orf53-201ENST00000221576 ARHGAP27Q6ZUM4 889 aa8.44□□□□□ -1.06
C19orf53-201ENST00000221576 SMIM5Q71RC9 77 aa8.44□□□□□ -1.06
C19orf53-201ENST00000221576 LINC00116Q8NCU8 138 aa8.44□□□□□ -1.06
C19orf53-201ENST00000221576 CCDC87Q9NVE4 849 aa8.44□□□□□ -1.06
C19orf53-201ENST00000221576 HSP90AB1P08238 724 aaKnown RBP8.43□□□□□ -1.06
C19orf53-201ENST00000221576 RFC4P35249 363 aa8.43□□□□□ -1.06
C19orf53-201ENST00000221576 TNNT2P45379 298 aaPredicted RBP8.43□□□□□ -1.06
C19orf53-201ENST00000221576 NLGN1Q8N2Q7 840 aa8.43□□□□□ -1.06
C19orf53-201ENST00000221576 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.43□□□□□ -1.06
C19orf53-201ENST00000221576 ASAP1Q9ULH1 1129 aa8.43□□□□□ -1.06
C19orf53-201ENST00000221576 PARP3Q9Y6F1 533 aa8.43□□□□□ -1.06
C19orf53-201ENST00000221576 FCHSD2O94868 740 aa8.42□□□□□ -1.06
C19orf53-201ENST00000221576 APLP1P51693 650 aa8.42□□□□□ -1.06
C19orf53-201ENST00000221576 TGFB2P61812 414 aa8.42□□□□□ -1.06
C19orf53-201ENST00000221576 NKX1-1Q15270 411 aaPredicted RBP8.42□□□□□ -1.06
C19orf53-201ENST00000221576 WASHC2AQ641Q2 1341 aa8.42□□□□□ -1.06
C19orf53-201ENST00000221576 KIF20BQ96Q89 1820 aa8.42□□□□□ -1.06
C19orf53-201ENST00000221576 A0A0G2JLW4 131 aa8.41□□□□□ -1.06
C19orf53-201ENST00000221576 PHKG2P15735 406 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms