RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 LTBP4Q8N2S1 1624 aa21.71■■□□□ 1.07
CHGA-201ENST00000216492 ZNF853P0CG23 659 aa21.71■■□□□ 1.07
CHGA-201ENST00000216492 PDE3AQ14432 1141 aa21.71■■□□□ 1.07
CHGA-201ENST00000216492 CHRNA2Q15822 529 aa21.7■■□□□ 1.06
CHGA-201ENST00000216492 CANXP27824 592 aaKnown RBP21.69■■□□□ 1.06
CHGA-201ENST00000216492 ERBB3P21860 1342 aa21.69■■□□□ 1.06
CHGA-201ENST00000216492 HAP1P54257 671 aaPredicted RBP21.68■■□□□ 1.06
CHGA-201ENST00000216492 KIAA0232Q92628 1395 aa21.68■■□□□ 1.06
CHGA-201ENST00000216492 MBIPQ9NS73 344 aa21.68■■□□□ 1.06
CHGA-201ENST00000216492 CPDO75976 1380 aa21.67■■□□□ 1.06
CHGA-201ENST00000216492 HTATSF1O43719 755 aaKnown RBP21.67■■□□□ 1.06
CHGA-201ENST00000216492 GNAT3A8MTJ3 354 aa21.67■■□□□ 1.06
CHGA-201ENST00000216492 DDRGK1Q96HY6 314 aa21.66■■□□□ 1.06
CHGA-201ENST00000216492 BCL2L13Q9BXK5 485 aa21.65■■□□□ 1.06
CHGA-201ENST00000216492 CSB-PGBD3P0DP91 1061 aa21.64■■□□□ 1.05
CHGA-201ENST00000216492 FRAT1Q92837 279 aaPredicted RBP21.64■■□□□ 1.05
CHGA-201ENST00000216492 PRDM11Q9NQV5 511 aa21.64■■□□□ 1.05
CHGA-201ENST00000216492 NLRP2Q9NX02 1062 aa21.64■■□□□ 1.05
CHGA-201ENST00000216492 CHL1O00533 1208 aa21.64■■□□□ 1.05
CHGA-201ENST00000216492 SKAP1Q86WV1 359 aa21.64■■□□□ 1.05
CHGA-201ENST00000216492 DLG5Q8TDM6 1919 aa21.63■■□□□ 1.05
CHGA-201ENST00000216492 FAM161AQ3B820 660 aa21.63■■□□□ 1.05
CHGA-201ENST00000216492 PLEKHO1Q53GL0 409 aaPredicted RBP21.63■■□□□ 1.05
CHGA-201ENST00000216492 AAMPQ13685 434 aa21.62■■□□□ 1.05
CHGA-201ENST00000216492 AMOTQ4VCS5 1084 aa21.62■■□□□ 1.05
CHGA-201ENST00000216492 NBR1Q14596 966 aa21.62■■□□□ 1.05
CHGA-201ENST00000216492 NCAPD2Q15021 1401 aa21.61■■□□□ 1.05
CHGA-201ENST00000216492 TOM1O60784 492 aa21.6■■□□□ 1.05
CHGA-201ENST00000216492 VAMP4O75379 141 aa21.6■■□□□ 1.05
CHGA-201ENST00000216492 AEBP2Q6ZN18 517 aaPredicted RBP21.6■■□□□ 1.05
CHGA-201ENST00000216492 IL17REQ8NFR9 667 aa21.6■■□□□ 1.05
CHGA-201ENST00000216492 SSH1Q8WYL5 1049 aa21.6■■□□□ 1.05
CHGA-201ENST00000216492 ZNF428Q96B54 188 aa21.6■■□□□ 1.05
CHGA-201ENST00000216492 SMC4Q9NTJ3 1288 aa21.6■■□□□ 1.05
CHGA-201ENST00000216492 CRB1P82279 1406 aa21.6■■□□□ 1.05
CHGA-201ENST00000216492 MAP3K5Q99683 1374 aa21.6■■□□□ 1.05
CHGA-201ENST00000216492 ELL2O00472 640 aaPredicted RBP21.6■■□□□ 1.05
CHGA-201ENST00000216492 TSPYL6Q8N831 410 aa21.6■■□□□ 1.05
CHGA-201ENST00000216492 NHSL1Q5SYE7 1610 aa21.59■■□□□ 1.05
CHGA-201ENST00000216492 CLUAP1Q96AJ1 413 aa21.59■■□□□ 1.05
CHGA-201ENST00000216492 RTL5Q5HYW3 569 aaPredicted RBP21.59■■□□□ 1.05
CHGA-201ENST00000216492 C8orf58Q8NAV2 365 aa21.59■■□□□ 1.05
CHGA-201ENST00000216492 TWISTNBQ3B726 338 aaPredicted RBP21.58■■□□□ 1.05
CHGA-201ENST00000216492 RAPGEF4Q8WZA2 1011 aa21.58■■□□□ 1.05
CHGA-201ENST00000216492 MIS18AQ9NYP9 233 aa21.58■■□□□ 1.05
CHGA-201ENST00000216492 ALDH1L2Q3SY69 923 aa21.57■■□□□ 1.04
CHGA-201ENST00000216492 AKAP4Q5JQC9 854 aa21.57■■□□□ 1.04
CHGA-201ENST00000216492 ZNF530Q6P9A1 599 aaPredicted RBP21.57■■□□□ 1.04
CHGA-201ENST00000216492 CRYBG1Q9Y4K1 1723 aa21.56■■□□□ 1.04
CHGA-201ENST00000216492 TSPYL4Q9UJ04 414 aa21.56■■□□□ 1.04
CHGA-201ENST00000216492 COL18A1P39060 1754 aa21.56■■□□□ 1.04
CHGA-201ENST00000216492 ABCC6O95255 1503 aa21.56■■□□□ 1.04
CHGA-201ENST00000216492 PANK1Q8TE04 598 aa21.56■■□□□ 1.04
CHGA-201ENST00000216492 COG6Q9Y2V7 657 aa21.56■■□□□ 1.04
CHGA-201ENST00000216492 ROBO1Q9Y6N7 1651 aa21.55■■□□□ 1.04
CHGA-201ENST00000216492 RGPD2P0DJD1 1756 aa21.55■■□□□ 1.04
CHGA-201ENST00000216492 RGS3P49796 1198 aa21.55■■□□□ 1.04
CHGA-201ENST00000216492 PIP4K2BP78356 416 aa21.55■■□□□ 1.04
CHGA-201ENST00000216492 C1orf141Q5JVX7 400 aa21.55■■□□□ 1.04
CHGA-201ENST00000216492 RGPD5Q99666 1765 aa21.55■■□□□ 1.04
CHGA-201ENST00000216492 TAF7Q15545 349 aaPredicted RBP21.54■■□□□ 1.04
CHGA-201ENST00000216492 C8orf34Q49A92 452 aa21.54■■□□□ 1.04
CHGA-201ENST00000216492 ZKSCAN2Q63HK3 967 aa21.54■■□□□ 1.04
CHGA-201ENST00000216492 TATP17735 454 aaPredicted RBP21.54■■□□□ 1.04
CHGA-201ENST00000216492 LGR6Q9HBX8 967 aa21.54■■□□□ 1.04
CHGA-201ENST00000216492 NOB1Q9ULX3 412 aaKnown RBP21.53■■□□□ 1.04
CHGA-201ENST00000216492 TOM1L2Q6ZVM7 507 aa21.52■■□□□ 1.04
CHGA-201ENST00000216492 WDR17Q8IZU2 1322 aa21.52■■□□□ 1.04
CHGA-201ENST00000216492 EVA1CP58658 441 aa21.52■■□□□ 1.04
CHGA-201ENST00000216492 KRT24Q2M2I5 525 aa21.52■■□□□ 1.04
CHGA-201ENST00000216492 IGHDP01880 384 aa21.51■■□□□ 1.03
CHGA-201ENST00000216492 BRPF1P55201 1214 aaPredicted RBP21.51■■□□□ 1.03
CHGA-201ENST00000216492 MPRIPQ6WCQ1 1025 aa21.51■■□□□ 1.03
CHGA-201ENST00000216492 BABAM1Q9NWV8 329 aa21.51■■□□□ 1.03
CHGA-201ENST00000216492 CEMIPQ8WUJ3 1361 aa21.51■■□□□ 1.03
CHGA-201ENST00000216492 IPO8O15397 1037 aaKnown RBP21.51■■□□□ 1.03
CHGA-201ENST00000216492 CAMTA1Q9Y6Y1 1673 aa21.51■■□□□ 1.03
CHGA-201ENST00000216492 AHDC1Q5TGY3 1603 aaPredicted RBP21.5■■□□□ 1.03
CHGA-201ENST00000216492 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.5■■□□□ 1.03
CHGA-201ENST00000216492 SPG7Q9UQ90 795 aa21.5■■□□□ 1.03
CHGA-201ENST00000216492 TNNQ9UQP3 1299 aa21.5■■□□□ 1.03
CHGA-201ENST00000216492 KIF16BQ96L93 1317 aa21.5■■□□□ 1.03
CHGA-201ENST00000216492 UBAP1LF5GYI3 381 aa21.49■■□□□ 1.03
CHGA-201ENST00000216492 ATF7IPQ6VMQ6 1270 aa21.49■■□□□ 1.03
CHGA-201ENST00000216492 STRN4Q9NRL3 753 aa21.49■■□□□ 1.03
CHGA-201ENST00000216492 RLBP1P12271 317 aa21.49■■□□□ 1.03
CHGA-201ENST00000216492 DZIP1LQ8IYY4 767 aaKnown RBP21.49■■□□□ 1.03
CHGA-201ENST00000216492 MRPL50Q8N5N7 158 aaKnown RBP21.49■■□□□ 1.03
CHGA-201ENST00000216492 DAXXQ9UER7 740 aaPredicted RBP21.49■■□□□ 1.03
CHGA-201ENST00000216492 LMO7Q8WWI1 1683 aa21.48■■□□□ 1.03
CHGA-201ENST00000216492 RNMTO43148 476 aaKnown RBP21.48■■□□□ 1.03
CHGA-201ENST00000216492 DEKP35659 375 aaKnown RBP21.48■■□□□ 1.03
CHGA-201ENST00000216492 TRIM27P14373 513 aa21.48■■□□□ 1.03
CHGA-201ENST00000216492 TEFQ10587 303 aa21.48■■□□□ 1.03
CHGA-201ENST00000216492 FTSJ3Q8IY81 847 aaKnown RBP21.48■■□□□ 1.03
CHGA-201ENST00000216492 COL5A2P05997 1499 aaPredicted RBP21.47■■□□□ 1.03
CHGA-201ENST00000216492 LARP1Q6PKG0 1096 aaKnown RBP21.46■■□□□ 1.03
CHGA-201ENST00000216492 CARD10Q9BWT7 1032 aa21.46■■□□□ 1.03
CHGA-201ENST00000216492 BTG4Q9NY30 223 aa21.46■■□□□ 1.03
CHGA-201ENST00000216492 USP35Q9P2H5 1018 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms