RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 PTMAP06454 111 aaKnown RBP18.18■□□□□ 0.5
TMEM38A-201ENST00000187762 KIF3AQ9Y496 699 aa18.18■□□□□ 0.5
TMEM38A-201ENST00000187762 IL16Q14005 1332 aa18.17■□□□□ 0.5
TMEM38A-201ENST00000187762 IGSF3O75054 1194 aa18.17■□□□□ 0.5
TMEM38A-201ENST00000187762 HMOX1P09601 288 aa18.17■□□□□ 0.5
TMEM38A-201ENST00000187762 FAM69CQ0P6D2 419 aa18.17■□□□□ 0.5
TMEM38A-201ENST00000187762 HDAC1Q13547 482 aaPredicted RBP18.17■□□□□ 0.5
TMEM38A-201ENST00000187762 MLECQ14165 292 aa18.17■□□□□ 0.5
TMEM38A-201ENST00000187762 PLCD3Q8N3E9 789 aa18.17■□□□□ 0.5
TMEM38A-201ENST00000187762 RBM42Q9BTD8 480 aaKnown RBP18.17■□□□□ 0.5
TMEM38A-201ENST00000187762 POLKQ9UBT6 870 aa18.17■□□□□ 0.5
TMEM38A-201ENST00000187762 DDX19BQ9UMR2 479 aa18.17■□□□□ 0.5
TMEM38A-201ENST00000187762 BCL2L12Q9HB09 334 aa18.16■□□□□ 0.5
TMEM38A-201ENST00000187762 AK9Q5TCS8 1911 aa18.16■□□□□ 0.5
TMEM38A-201ENST00000187762 PDCL2Q8N4E4 241 aa18.16■□□□□ 0.5
TMEM38A-201ENST00000187762 GPT2Q8TD30 523 aa18.16■□□□□ 0.5
TMEM38A-201ENST00000187762 THUMPD2Q9BTF0 503 aaKnown RBP18.16■□□□□ 0.5
TMEM38A-201ENST00000187762 SETD1AO15047 1707 aaKnown RBP18.15■□□□□ 0.5
TMEM38A-201ENST00000187762 CDK11BP21127 795 aaKnown RBP18.15■□□□□ 0.5
TMEM38A-201ENST00000187762 A2ML1A8K2U0 1454 aa18.15■□□□□ 0.5
TMEM38A-201ENST00000187762 PHACTR3Q96KR7 559 aa18.15■□□□□ 0.5
TMEM38A-201ENST00000187762 RIMBP3CA6NJZ7 1639 aa18.14■□□□□ 0.5
TMEM38A-201ENST00000187762 RIMBP3BA6NNM3 1639 aa18.14■□□□□ 0.5
TMEM38A-201ENST00000187762 RIMBP3Q9UFD9 1639 aa18.14■□□□□ 0.5
TMEM38A-201ENST00000187762 ZRANB1Q9UGI0 708 aa18.14■□□□□ 0.49
TMEM38A-201ENST00000187762 EMILIN1Q9Y6C2 1016 aa18.14■□□□□ 0.49
TMEM38A-201ENST00000187762 FAM135BQ49AJ0 1406 aa18.14■□□□□ 0.49
TMEM38A-201ENST00000187762 CDC42BPGQ6DT37 1551 aa18.14■□□□□ 0.49
TMEM38A-201ENST00000187762 FCHSD2O94868 740 aa18.14■□□□□ 0.49
TMEM38A-201ENST00000187762 NUCB2P80303 420 aa18.14■□□□□ 0.49
TMEM38A-201ENST00000187762 ZNF771Q7L3S4 317 aaPredicted RBP18.14■□□□□ 0.49
TMEM38A-201ENST00000187762 PIBF1Q8WXW3 757 aa18.14■□□□□ 0.49
TMEM38A-201ENST00000187762 SYCE3A1L190 88 aa18.13■□□□□ 0.49
TMEM38A-201ENST00000187762 CYP2E1P05181 493 aaPredicted RBP18.13■□□□□ 0.49
TMEM38A-201ENST00000187762 RIMS2Q9UQ26 1411 aa18.13■□□□□ 0.49
TMEM38A-201ENST00000187762 KIF16BQ96L93 1317 aa18.13■□□□□ 0.49
TMEM38A-201ENST00000187762 PRPF40AO75400 957 aaKnown RBP18.12■□□□□ 0.49
TMEM38A-201ENST00000187762 NOLC1Q14978 699 aaKnown RBP eCLIP18.12■□□□□ 0.49
TMEM38A-201ENST00000187762 RNF214Q8ND24 703 aa18.12■□□□□ 0.49
TMEM38A-201ENST00000187762 TMEM63CQ9P1W3 806 aa18.12■□□□□ 0.49
TMEM38A-201ENST00000187762 U2AF2P26368 475 aaKnown RBP eCLIP18.12■□□□□ 0.49
TMEM38A-201ENST00000187762 ZBTB40Q9NUA8 1239 aa18.12■□□□□ 0.49
TMEM38A-201ENST00000187762 NCKAP5LQ9HCH0 1330 aa18.12■□□□□ 0.49
TMEM38A-201ENST00000187762 ATP7BP35670 1465 aa18.11■□□□□ 0.49
TMEM38A-201ENST00000187762 NME9Q86XW9 330 aa18.11■□□□□ 0.49
TMEM38A-201ENST00000187762 DLC1Q96QB1 1528 aa18.11■□□□□ 0.49
TMEM38A-201ENST00000187762 DIP2BQ9P265 1576 aa18.1■□□□□ 0.49
TMEM38A-201ENST00000187762 PAXIP1Q6ZW49 1069 aaPredicted RBP18.09■□□□□ 0.49
TMEM38A-201ENST00000187762 IRX5P78411 483 aaPredicted RBP18.09■□□□□ 0.49
TMEM38A-201ENST00000187762 PPIP5K1Q6PFW1 1433 aa18.09■□□□□ 0.49
TMEM38A-201ENST00000187762 SPATA31D1Q6ZQQ2 1576 aa18.09■□□□□ 0.49
TMEM38A-201ENST00000187762 ELL2O00472 640 aaPredicted RBP18.08■□□□□ 0.49
TMEM38A-201ENST00000187762 IPO8O15397 1037 aaKnown RBP18.08■□□□□ 0.49
TMEM38A-201ENST00000187762 PKP1Q13835 747 aa18.08■□□□□ 0.49
TMEM38A-201ENST00000187762 TSPYL6Q8N831 410 aa18.08■□□□□ 0.49
TMEM38A-201ENST00000187762 NRXN3Q9Y4C0 1643 aa18.08■□□□□ 0.49
TMEM38A-201ENST00000187762 NFE2L2Q16236 605 aa18.08■□□□□ 0.48
TMEM38A-201ENST00000187762 ALDH1L2Q3SY69 923 aa18.08■□□□□ 0.48
TMEM38A-201ENST00000187762 TXNDC2Q86VQ3 553 aa18.08■□□□□ 0.48
TMEM38A-201ENST00000187762 ANKRD7Q92527 254 aa18.08■□□□□ 0.48
TMEM38A-201ENST00000187762 METP08581 1390 aa18.07■□□□□ 0.48
TMEM38A-201ENST00000187762 FKBP5Q13451 457 aaPredicted RBP18.07■□□□□ 0.48
TMEM38A-201ENST00000187762 BMP2KLQ5H9B9 411 aa18.07■□□□□ 0.48
TMEM38A-201ENST00000187762 WASLO00401 505 aaPredicted RBP18.07■□□□□ 0.48
TMEM38A-201ENST00000187762 NUCB1Q02818 461 aa18.07■□□□□ 0.48
TMEM38A-201ENST00000187762 C17orf53Q8N3J3 647 aaPredicted RBP18.06■□□□□ 0.48
TMEM38A-201ENST00000187762 FEZ1Q99689 392 aa18.06■□□□□ 0.48
TMEM38A-201ENST00000187762 LNPKQ9C0E8 428 aa18.06■□□□□ 0.48
TMEM38A-201ENST00000187762 DLG5Q8TDM6 1919 aa18.06■□□□□ 0.48
TMEM38A-201ENST00000187762 RRS1Q15050 365 aaKnown RBP18.06■□□□□ 0.48
TMEM38A-201ENST00000187762 C1orf115Q9H7X2 142 aa18.06■□□□□ 0.48
TMEM38A-201ENST00000187762 NSFL1CQ9UNZ2 370 aaKnown RBP18.06■□□□□ 0.48
TMEM38A-201ENST00000187762 CPSF1Q10570 1443 aaKnown RBP18.06■□□□□ 0.48
TMEM38A-201ENST00000187762 IL13P35225 146 aa18.05■□□□□ 0.48
TMEM38A-201ENST00000187762 SPTLC3Q9NUV7 552 aa18.05■□□□□ 0.48
TMEM38A-201ENST00000187762 AGLP35573 1532 aa18.05■□□□□ 0.48
TMEM38A-201ENST00000187762 VAMP4O75379 141 aa18.05■□□□□ 0.48
TMEM38A-201ENST00000187762 MPNDQ8N594 471 aa18.05■□□□□ 0.48
TMEM38A-201ENST00000187762 CPS1P31327 1500 aa18.05■□□□□ 0.48
TMEM38A-201ENST00000187762 KCNJ4P48050 445 aa18.04■□□□□ 0.48
TMEM38A-201ENST00000187762 OGFRQ9NZT2 677 aa18.04■□□□□ 0.48
TMEM38A-201ENST00000187762 EDC4Q6P2E9 1401 aaKnown RBP18.04■□□□□ 0.48
TMEM38A-201ENST00000187762 REREQ9P2R6 1566 aa18.04■□□□□ 0.48
TMEM38A-201ENST00000187762 GABPB1Q06547 395 aaPredicted RBP18.04■□□□□ 0.48
TMEM38A-201ENST00000187762 TBC1D9Q6ZT07 1266 aa18.04■□□□□ 0.48
TMEM38A-201ENST00000187762 AEBP2Q6ZN18 517 aaPredicted RBP18.03■□□□□ 0.48
TMEM38A-201ENST00000187762 TSPY26PQ9H489 355 aa18.03■□□□□ 0.48
TMEM38A-201ENST00000187762 FAM83GA6ND36 823 aa18.03■□□□□ 0.48
TMEM38A-201ENST00000187762 MRPL50Q8N5N7 158 aaKnown RBP18.03■□□□□ 0.48
TMEM38A-201ENST00000187762 NUDT16Q96DE0 195 aaKnown RBP18.03■□□□□ 0.48
TMEM38A-201ENST00000187762 MBIPQ9NS73 344 aa18.03■□□□□ 0.48
TMEM38A-201ENST00000187762 CHD1LQ86WJ1 897 aa18.02■□□□□ 0.48
TMEM38A-201ENST00000187762 CDK12Q9NYV4 1490 aaPredicted RBP18.02■□□□□ 0.48
TMEM38A-201ENST00000187762 TTC12Q9H892 705 aaPredicted RBP18.02■□□□□ 0.48
TMEM38A-201ENST00000187762 SLC20A2Q08357 652 aa18.02■□□□□ 0.47
TMEM38A-201ENST00000187762 RIOK3O14730 519 aaKnown RBP18.01■□□□□ 0.47
TMEM38A-201ENST00000187762 ZBTB7BO15156 539 aaPredicted RBP18.01■□□□□ 0.47
TMEM38A-201ENST00000187762 DCTN1Q14203 1278 aa18.01■□□□□ 0.47
TMEM38A-201ENST00000187762 MBD3O95983 291 aa18.01■□□□□ 0.47
TMEM38A-201ENST00000187762 RABEP1Q15276 862 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms