RNA–Protein interactions for RNA: ENSMUST00000168967.8

Pdlim5-204, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,755 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-204ENSMUST00000168967 Abcf1Q6P542 837 aaKnown RBP13□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Atl3Q91YH5 541 aa13□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Dph2Q9CR25 489 aa13□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Spag9Q58A65 1321 aaKnown RBP12.99□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Ppp2r3aB2RXC8 1150 aa12.99□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Rabep1O35551 862 aa12.99□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Kiaa1210E9Q0C6 1637 aa12.99□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Fnbp4Q6ZQ03 1031 aa12.99□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Abcc3B2RX12 1523 aa12.98□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 AI481877A2ALV5 1481 aa12.98□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 KdrP35918 1367 aa12.98□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Kif7B7ZNG0 1348 aa12.98□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Sart1Q9Z315 806 aaKnown RBP12.98□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Tbc1d32Q3URV1 1296 aa12.97□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Abcc6Q9R1S7 1498 aa12.97□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Ylpm1Q9R0I7 1386 aaKnown RBP12.97□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 ArxO35085 564 aa12.97□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Kcnn2P58390 839 aa12.97□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Zbtb4Q5F293 982 aa12.97□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Isy1Q69ZQ2 285 aaKnown RBP12.97□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Apbb1Q9QXJ1 710 aa12.97□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Nckap5lQ6GQX2 1323 aa12.96□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Cep152A2AUM9 1736 aaKnown RBP12.96□□□□□ -0.33
Pdlim5-204ENSMUST00000168967 Kctd12Q6WVG3 327 aa12.96□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Tspyl2Q7TQI8 677 aa12.96□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Itgbl1Q8VDV0 494 aa12.96□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Ankrd34aB2RW11 495 aa12.95□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Dsc3P55850 896 aa12.94□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Ppp1r18Q8BQ30 594 aa12.94□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Antxr1Q9CZ52 562 aa12.94□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Nos2P29477 1144 aa12.94□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 4930567H17RikQ3V0K5 233 aa12.94□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Kif1bQ60575 1816 aaKnown RBP12.93□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Duxf3A0A0N4SV92 674 aa12.93□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 A930017K11RikE0CXQ2 571 aa12.93□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Ppp4cP97470 307 aa12.93□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Cdv3Q4VAA2 281 aaKnown RBP12.93□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Dnttip2Q8R2M2 758 aaKnown RBP12.93□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Pcdhb16Q91Y03 802 aa12.93□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Kiaa1107Q80TK0 1369 aa12.93□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Nphp4P59240 1425 aa12.92□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Abca17E9PX95 1733 aa12.92□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Itga6Q61739 1091 aa12.92□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Gtf2e1Q9D0D5 440 aa12.92□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Hfm1D3Z4R1 1434 aa12.92□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Gm6268A2A3U9 297 aa12.92□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Wbp1lQ8BGW2 348 aa12.92□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Phlpp2Q8BXA7 1320 aa12.91□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 ShprhQ7TPQ3 1674 aa12.91□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Iqsec2Q5DU25 1478 aa12.91□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Pank1Q8K4K6 548 aa12.91□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Cdc42bpbQ7TT50 1713 aa12.9□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Stk11ipQ3TAA7 1072 aa12.9□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Zfp943Q6NZP4 507 aa12.9□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Tnpo1Q8BFY9 898 aaKnown RBP12.9□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Tpcn1Q9EQJ0 817 aa12.9□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Rlbp1Q9Z275 317 aa12.9□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Abca8bQ8K440 1620 aa12.9□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Talpid3E9PV87 1520 aa12.9□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Usp54Q8BL06 1588 aaKnown RBP12.9□□□□□ -0.34
Pdlim5-204ENSMUST00000168967 Arid3cA6PWV5 409 aa12.89□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Map7O88735 730 aa12.89□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Usp46P62069 366 aa12.89□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Gm20521D3Z5F7 333 aa12.89□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Myom1Q62234 1667 aaKnown RBP12.88□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 DnmbpQ6TXD4 1580 aa12.88□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Gigyf2Q6Y7W8 1291 aaKnown RBP12.88□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Ptcd1Q8C2E4 695 aaKnown RBP12.88□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Zbtb7cQ8VCZ7 619 aa12.88□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 KarsQ99MN1 595 aaKnown RBP12.88□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Znf608Q56A10 1511 aa12.88□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Mcm4P49717 862 aa12.87□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Tbc1d12Q6A039 696 aa12.87□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Fbxo11Q7TPD1 930 aaKnown RBP12.87□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Scube3Q66PY1 993 aa12.86□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Usp3Q91W36 520 aaKnown RBP12.86□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 IbtkQ6ZPR6 1352 aaKnown RBP12.86□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Rims1Q99NE5 1463 aa12.85□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Klra1P20937 262 aa12.85□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 ClmQ7TSN2 230 aa12.85□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Ccar1Q8CH18 1146 aaKnown RBP12.85□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 GsdmaQ9EST1 446 aa12.85□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 NhsB1AV60 1647 aa12.85□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Cfap65Q3V0B4 1847 aa12.85□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Zfyve16Q80U44 1528 aa12.85□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Eif2ak4Q9QZ05 1648 aa12.84□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Fam193bQ3U2K0 892 aa12.84□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Ncapd2Q8K2Z4 1392 aa12.84□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Terf2O35144 541 aa12.84□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Krtap4-1Q3UUY3 169 aa12.84□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Rrp12Q6P5B0 1295 aaKnown RBP12.84□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Usp40Q8BWR4 1235 aa12.84□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 LrgukQ9D5S7 820 aa12.84□□□□□ -0.35
Pdlim5-204ENSMUST00000168967 Uggt1Q6P5E4 1551 aa12.83□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Srpk2O54781 681 aaKnown RBP12.83□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 ErbinQ80TH2 1402 aa12.83□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Adgrl1Q80TR1 1466 aa12.83□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Igf1rQ60751 1373 aa12.82□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Igflr1Q3U4N7 345 aa12.81□□□□□ -0.36
Pdlim5-204ENSMUST00000168967 Gas2l2Q5SSG4 860 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms