RNA–Protein interactions for RNA: ENSMUST00000165443.2

Nup50-201, Transcript of Nuclear pore complex protein Nup50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup50, Length 4,741 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50-201ENSMUST00000165443 Cyp26c1B2RXA7 518 aa12.51□□□□□ -0.41
Nup50-201ENSMUST00000165443 Ccdc102aQ3TMW1 549 aa12.51□□□□□ -0.41
Nup50-201ENSMUST00000165443 Ddx19aQ61655 478 aaKnown RBP12.51□□□□□ -0.41
Nup50-201ENSMUST00000165443 Wdr33Q8K4P0 1330 aaKnown RBP12.51□□□□□ -0.41
Nup50-201ENSMUST00000165443 Ppp1r15aP17564 657 aa12.51□□□□□ -0.41
Nup50-201ENSMUST00000165443 TbcaP48428 108 aaKnown RBP12.5□□□□□ -0.41
Nup50-201ENSMUST00000165443 Map9Q3TRR0 646 aa12.5□□□□□ -0.41
Nup50-201ENSMUST00000165443 Erlin2Q8BFZ9 340 aa12.5□□□□□ -0.41
Nup50-201ENSMUST00000165443 Abcc2Q8VI47 1543 aa12.5□□□□□ -0.41
Nup50-201ENSMUST00000165443 Plekhd1B2RPU2 505 aa12.5□□□□□ -0.41
Nup50-201ENSMUST00000165443 Jakmip2D3YXK0 820 aa12.5□□□□□ -0.41
Nup50-201ENSMUST00000165443 Tspyl2Q7TQI8 677 aa12.5□□□□□ -0.41
Nup50-201ENSMUST00000165443 Wasf1Q8R5H6 559 aa12.5□□□□□ -0.41
Nup50-201ENSMUST00000165443 Ggnbp2Q5SV77 696 aa12.5□□□□□ -0.41
Nup50-201ENSMUST00000165443 Paxip1Q6NZQ4 1056 aa12.5□□□□□ -0.41
Nup50-201ENSMUST00000165443 Arhgef12Q8R4H2 1543 aaKnown RBP12.5□□□□□ -0.41
Nup50-201ENSMUST00000165443 Gps2Q921N8 327 aa12.49□□□□□ -0.41
Nup50-201ENSMUST00000165443 Map3k4O08648 1597 aa12.49□□□□□ -0.41
Nup50-201ENSMUST00000165443 Syce3B5KM66 88 aa12.49□□□□□ -0.41
Nup50-201ENSMUST00000165443 Trim34bJ3QNR8 485 aa12.49□□□□□ -0.41
Nup50-201ENSMUST00000165443 Plekhm2Q80TQ5 1018 aa12.49□□□□□ -0.41
Nup50-201ENSMUST00000165443 Mum1Q6DID5 682 aa12.48□□□□□ -0.41
Nup50-201ENSMUST00000165443 Fsd2Q8BZ52 692 aa12.48□□□□□ -0.41
Nup50-201ENSMUST00000165443 4930572O03RikQ8C5Y0 211 aa12.48□□□□□ -0.41
Nup50-201ENSMUST00000165443 Flad1Q8R123 492 aa12.48□□□□□ -0.41
Nup50-201ENSMUST00000165443 Rufy2Q8R4C2 606 aa12.48□□□□□ -0.41
Nup50-201ENSMUST00000165443 Anapc15-psA0A140T8L6 141 aa12.48□□□□□ -0.41
Nup50-201ENSMUST00000165443 Zscan20B2KFW1 1030 aa12.48□□□□□ -0.41
Nup50-201ENSMUST00000165443 Commd10Q8JZY2 202 aa12.48□□□□□ -0.41
Nup50-201ENSMUST00000165443 Kank1E9Q238 1360 aa12.48□□□□□ -0.41
Nup50-201ENSMUST00000165443 Strn4P58404 760 aa12.48□□□□□ -0.41
Nup50-201ENSMUST00000165443 Eif5P59325 429 aaKnown RBP12.48□□□□□ -0.41
Nup50-201ENSMUST00000165443 Spag5Q7TME2 1165 aa12.48□□□□□ -0.41
Nup50-201ENSMUST00000165443 Sel1lQ9Z2G6 790 aa12.48□□□□□ -0.41
Nup50-201ENSMUST00000165443 Slu7Q8BHJ9 585 aa12.47□□□□□ -0.41
Nup50-201ENSMUST00000165443 Gcc2Q8CHG3 1679 aa12.47□□□□□ -0.41
Nup50-201ENSMUST00000165443 Phlpp2Q8BXA7 1320 aa12.47□□□□□ -0.41
Nup50-201ENSMUST00000165443 Lamb3Q61087 1168 aa12.47□□□□□ -0.41
Nup50-201ENSMUST00000165443 Adck5Q80V03 582 aa12.47□□□□□ -0.41
Nup50-201ENSMUST00000165443 Samm50Q8BGH2 469 aa12.47□□□□□ -0.41
Nup50-201ENSMUST00000165443 MicalclQ9D5U9 680 aa12.47□□□□□ -0.41
Nup50-201ENSMUST00000165443 Larp1Q6ZQ58 1072 aaKnown RBP12.47□□□□□ -0.41
Nup50-201ENSMUST00000165443 Abcc1O35379 1528 aa12.47□□□□□ -0.41
Nup50-201ENSMUST00000165443 Exoc6bA6H5Z3 810 aa12.47□□□□□ -0.41
Nup50-201ENSMUST00000165443 Arhgef11Q68FM7 1552 aa12.47□□□□□ -0.41
Nup50-201ENSMUST00000165443 Prex2Q3LAC4 1598 aa12.46□□□□□ -0.41
Nup50-201ENSMUST00000165443 Abcd1P48410 736 aa12.46□□□□□ -0.41
Nup50-201ENSMUST00000165443 Pafah1b1P63005 410 aaKnown RBP12.46□□□□□ -0.41
Nup50-201ENSMUST00000165443 Slc13a4Q8BZ82 625 aa12.46□□□□□ -0.41
Nup50-201ENSMUST00000165443 Mrvi1Q9WUX5 899 aaKnown RBP12.46□□□□□ -0.41
Nup50-201ENSMUST00000165443 Ttc21bQ0HA38 1315 aa12.46□□□□□ -0.41
Nup50-201ENSMUST00000165443 Cep131Q62036 1060 aa12.46□□□□□ -0.41
Nup50-201ENSMUST00000165443 Pms1Q8K119 917 aa12.46□□□□□ -0.41
Nup50-201ENSMUST00000165443 Lrrfip1Q3UZ39 729 aaKnown RBP12.46□□□□□ -0.42
Nup50-201ENSMUST00000165443 Afap1Q80YS6 731 aa12.46□□□□□ -0.42
Nup50-201ENSMUST00000165443 Prkar2bP31324 416 aa12.45□□□□□ -0.42
Nup50-201ENSMUST00000165443 Fam13aQ8BGI4 693 aa12.45□□□□□ -0.42
Nup50-201ENSMUST00000165443 Gjb2Q00977 226 aa12.45□□□□□ -0.42
Nup50-201ENSMUST00000165443 ItpripQ3TNL8 555 aa12.45□□□□□ -0.42
Nup50-201ENSMUST00000165443 Hvcn1Q3U2S8 269 aa12.45□□□□□ -0.42
Nup50-201ENSMUST00000165443 Pdcl2Q78Y63 240 aa12.45□□□□□ -0.42
Nup50-201ENSMUST00000165443 Lrrc45Q8CIM1 670 aa12.45□□□□□ -0.42
Nup50-201ENSMUST00000165443 Rrbp1Q99PL5 1605 aaKnown RBP12.45□□□□□ -0.42
Nup50-201ENSMUST00000165443 Gm21698A0A087WQP8 267 aa12.45□□□□□ -0.42
Nup50-201ENSMUST00000165443 Gm21671G3UY31 267 aa12.45□□□□□ -0.42
Nup50-201ENSMUST00000165443 Rprd2Q6NXI6 1469 aaKnown RBP12.44□□□□□ -0.42
Nup50-201ENSMUST00000165443 Naip5Q9R016 1403 aa12.44□□□□□ -0.42
Nup50-201ENSMUST00000165443 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.44□□□□□ -0.42
Nup50-201ENSMUST00000165443 Btbd11Q6GQW0 1109 aa12.44□□□□□ -0.42
Nup50-201ENSMUST00000165443 Trim34aQ99PP6 485 aa12.44□□□□□ -0.42
Nup50-201ENSMUST00000165443 Cep89Q9CZX2 791 aa12.44□□□□□ -0.42
Nup50-201ENSMUST00000165443 Brf1Q8CFK2 676 aa12.44□□□□□ -0.42
Nup50-201ENSMUST00000165443 Ppm1fQ8CGA0 452 aa12.44□□□□□ -0.42
Nup50-201ENSMUST00000165443 Riok1Q922Q2 567 aa12.44□□□□□ -0.42
Nup50-201ENSMUST00000165443 Rcan3Q9JKK0 239 aa12.44□□□□□ -0.42
Nup50-201ENSMUST00000165443 Mapkbp1Q6NS57 1503 aa12.44□□□□□ -0.42
Nup50-201ENSMUST00000165443 Pdia4P08003 638 aaKnown RBP12.44□□□□□ -0.42
Nup50-201ENSMUST00000165443 Ift57Q8BXG3 429 aa12.44□□□□□ -0.42
Nup50-201ENSMUST00000165443 Gnl2Q99LH1 728 aaKnown RBP12.43□□□□□ -0.42
Nup50-201ENSMUST00000165443 Ccdc39Q9D5Y1 937 aa12.43□□□□□ -0.42
Nup50-201ENSMUST00000165443 Kdm5bQ80Y84 1544 aa12.43□□□□□ -0.42
Nup50-201ENSMUST00000165443 Gm7361D3Z6R1 267 aa12.43□□□□□ -0.42
Nup50-201ENSMUST00000165443 Ncbp1Q3UYV9 790 aaKnown RBP12.43□□□□□ -0.42
Nup50-201ENSMUST00000165443 Eif3bQ8JZQ9 803 aaKnown RBP12.43□□□□□ -0.42
Nup50-201ENSMUST00000165443 Ppp1r42Q8R1Z4 357 aa12.43□□□□□ -0.42
Nup50-201ENSMUST00000165443 Arhgef40Q3UPH7 1517 aa12.43□□□□□ -0.42
Nup50-201ENSMUST00000165443 Trim55G3X8Y1 545 aa12.43□□□□□ -0.42
Nup50-201ENSMUST00000165443 AidaQ8C4Q6 305 aa12.43□□□□□ -0.42
Nup50-201ENSMUST00000165443 Slc26a8Q8R0C3 999 aa12.43□□□□□ -0.42
Nup50-201ENSMUST00000165443 Rbm5Q91YE7 815 aaKnown RBP12.43□□□□□ -0.42
Nup50-201ENSMUST00000165443 Kcnh5Q920E3 988 aa12.43□□□□□ -0.42
Nup50-201ENSMUST00000165443 Trim11Q99PQ2 467 aa12.43□□□□□ -0.42
Nup50-201ENSMUST00000165443 CenphQ9QYM8 241 aa12.43□□□□□ -0.42
Nup50-201ENSMUST00000165443 Atp10dQ8K2X1 1416 aa12.42□□□□□ -0.42
Nup50-201ENSMUST00000165443 Adcy10Q8C0T9 1614 aa12.42□□□□□ -0.42
Nup50-201ENSMUST00000165443 Ythdc2B2RR83 1445 aaKnown RBP12.42□□□□□ -0.42
Nup50-201ENSMUST00000165443 Q3UPC7 1272 aa12.42□□□□□ -0.42
Nup50-201ENSMUST00000165443 Ttc19Q8CC21 365 aa12.42□□□□□ -0.42
Nup50-201ENSMUST00000165443 Map3k13Q1HKZ5 959 aa12.42□□□□□ -0.42
Nup50-201ENSMUST00000165443 Pof1bQ8K4L4 587 aa12.42□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 9.4 ms