RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Bloc1s4Q8VED2 215 aa13.8□□□□□ -0.2
Ndc1-204ENSMUST00000139560 NexmifQ5DTT1 1515 aa13.79□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Dusp9Q7TNL7 452 aa13.79□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Wdr63B2RY71 923 aa13.79□□□□□ -0.2
Ndc1-204ENSMUST00000139560 AU019823E9PUQ3 292 aa13.79□□□□□ -0.2
Ndc1-204ENSMUST00000139560 TnikP83510 1323 aa13.79□□□□□ -0.2
Ndc1-204ENSMUST00000139560 GnpatP98192 678 aa13.79□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Tbc1d32Q3URV1 1296 aa13.79□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Erbb3Q61526 1339 aa13.79□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Ttc19Q8CC21 365 aa13.79□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Slc12a5Q91V14 1138 aa13.79□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Ccdc96Q9CR92 584 aa13.79□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Irgm2A0A140LIF8 407 aa13.78□□□□□ -0.2
Ndc1-204ENSMUST00000139560 AU022751B1B0V2 589 aa13.78□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Hvcn1Q3U2S8 269 aa13.78□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Pank2Q3U4S0 443 aa13.78□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Larp6Q8BN59 492 aa13.78□□□□□ -0.2
Ndc1-204ENSMUST00000139560 ImpactO55091 318 aa13.78□□□□□ -0.2
Ndc1-204ENSMUST00000139560 TkfcQ8VC30 578 aa13.78□□□□□ -0.2
Ndc1-204ENSMUST00000139560 CenphQ9QYM8 241 aa13.78□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Kcnj4P52189 445 aa13.78□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Gse1Q3U3C9 1213 aa13.78□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Themis2Q91YX0 663 aa13.78□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Gdpd2Q9ESM6 539 aa13.78□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Phlpp2Q8BXA7 1320 aa13.78□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Slc52a2Q9D8F3 450 aa13.78□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Med4Q9CQA5 270 aa13.77□□□□□ -0.2
Ndc1-204ENSMUST00000139560 KdrP35918 1367 aa13.77□□□□□ -0.2
Ndc1-204ENSMUST00000139560 Unc13aQ4KUS2 1712 aa13.77□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Snx13Q6PHS6 957 aa13.77□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Fam184aE9PW83 1143 aa13.77□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Ltv1Q6NSQ7 470 aaKnown RBP13.77□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Magi1Q6RHR9 1471 aa13.77□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Q3UJC8 639 aa13.76□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Gimap6Q8K349 305 aa13.76□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Slc26a8Q8R0C3 999 aa13.76□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Cct2P80314 535 aaKnown RBP13.76□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Tpm4Q6IRU2 248 aa13.76□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Washc4Q3UMB9 1173 aa13.76□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Spty2d1Q68FG3 682 aa13.76□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Slu7Q8BHJ9 585 aa13.76□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Otud6bQ8K2H2 294 aa13.76□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Cwc15Q9JHS9 229 aaKnown RBP13.76□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Slc13a4Q8BZ82 625 aa13.75□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Ccdc43Q9CR29 222 aaKnown RBP13.75□□□□□ -0.21
Ndc1-204ENSMUST00000139560 TchhA0A0B4J1F9 1599 aa13.75□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Camsap1A2AHC3 1581 aa13.75□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Anapc15-psA0A140T8L6 141 aa13.75□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Odf2A3KGV1 830 aaKnown RBP13.75□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Cep57l1Q8VDS7 400 aa13.75□□□□□ -0.21
Ndc1-204ENSMUST00000139560 March6Q6ZQ89 909 aa13.75□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Acsbg1Q99PU5 721 aa13.75□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Pms1Q8K119 917 aa13.74□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Il1rapl2Q9ERS6 686 aa13.74□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Rlbp1Q9Z275 317 aa13.74□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Bach1P97302 739 aa13.74□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Sycp1Q62209 993 aa13.74□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Sugp2Q8CH09 1067 aa13.74□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Btbd11Q6GQW0 1109 aa13.74□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Ccdc178Q8CDV0 866 aa13.74□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Cfap58B2RW38 873 aa13.74□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Ccne1Q61457 408 aa13.74□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Zrsr2Q62377 462 aaKnown RBP13.74□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Ppp1r3fQ9JIG4 799 aa13.73□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Gm10563F6WIE4 79 aa13.73□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Uri1Q3TLD5 531 aa13.73□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Ell2Q3UKU1 639 aa13.73□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Def6Q8C2K1 630 aa13.73□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Uspl1Q3ULM6 1089 aa13.73□□□□□ -0.21
Ndc1-204ENSMUST00000139560 3425401B19RikD3Z1D3 1412 aa13.73□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Zkscan7E9PVW1 718 aa13.73□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Jarid2Q62315 1234 aa13.72□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Spag5Q7TME2 1165 aa13.72□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Vps18Q8R307 973 aa13.72□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Dmrtc1Q9D9R7 182 aa13.72□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Tbc1d7Q9D0K0 293 aa13.72□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Stx6Q9JKK1 255 aa13.72□□□□□ -0.21
Ndc1-204ENSMUST00000139560 IbtkQ6ZPR6 1352 aaKnown RBP13.72□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Gm42641I6L9G2 585 aa13.72□□□□□ -0.21
Ndc1-204ENSMUST00000139560 TbcaP48428 108 aaKnown RBP13.72□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Ccdc181Q80ZU5 509 aa13.72□□□□□ -0.21
Ndc1-204ENSMUST00000139560 AtripQ8BMG1 785 aa13.72□□□□□ -0.21
Ndc1-204ENSMUST00000139560 GphnQ8BUV3 769 aaKnown RBP13.72□□□□□ -0.21
Ndc1-204ENSMUST00000139560 TnnQ80Z71 1560 aa13.71□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Larp1Q6ZQ58 1072 aaKnown RBP13.71□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Pcf11G3X9Z4 1553 aa13.71□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Eif3aP23116 1344 aaKnown RBP13.71□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Fchsd2Q3USJ8 740 aa13.71□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Slx4ipQ9D7Y9 413 aa13.71□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Cyb5rlB1AS42 316 aa13.71□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Ercc3P49135 783 aa13.71□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Ankib1Q6ZPS6 1085 aa13.71□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Ppp6r1Q7TSI3 856 aa13.71□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Fam13aQ8BGI4 693 aa13.71□□□□□ -0.21
Ndc1-204ENSMUST00000139560 Polr3dQ91WD1 398 aa13.71□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Trim55G3X8Y1 545 aa13.7□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Gzf1Q4VBD9 706 aa13.7□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Wwc1Q5SXA9 1104 aa13.7□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Grin2aP35436 1464 aa13.7□□□□□ -0.22
Ndc1-204ENSMUST00000139560 Igf1rQ60751 1373 aa13.7□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms