RNA–Protein interactions for RNA: ENSMUST00000112577.7

Pkp4-203, Transcript of Plakophilin-4, mousemouse

TSL 5 BASIC

Gene Pkp4, Length 4,222 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-203ENSMUST00000112577 Smc3Q9CW03 1217 aaKnown RBP10.53□□□□□ -0.72
Pkp4-203ENSMUST00000112577 Robo2Q7TPD3 1470 aa10.53□□□□□ -0.72
Pkp4-203ENSMUST00000112577 AU019823E9PUQ3 292 aa10.52□□□□□ -0.72
Pkp4-203ENSMUST00000112577 Nkx1-2P42580 305 aa10.52□□□□□ -0.72
Pkp4-203ENSMUST00000112577 NexnQ7TPW1 607 aa10.52□□□□□ -0.72
Pkp4-203ENSMUST00000112577 Adgrb3Q80ZF8 1522 aa10.52□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Tmem132eQ6IEE6 982 aa10.52□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Chmp4cQ9D7F7 232 aa10.52□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Znf335A2A5K6 1337 aa10.52□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Plekhd1B2RPU2 505 aa10.52□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Map3k13Q1HKZ5 959 aa10.52□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Ssh1Q76I79 1042 aa10.52□□□□□ -0.73
Pkp4-203ENSMUST00000112577 KdrP35918 1367 aa10.52□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Ythdc1E9Q5K9 736 aaKnown RBP10.51□□□□□ -0.73
Pkp4-203ENSMUST00000112577 PnnO35691 725 aaKnown RBP10.51□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Aldh1l2Q8K009 923 aa10.51□□□□□ -0.73
Pkp4-203ENSMUST00000112577 P2rx7Q9Z1M0 595 aa10.51□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Itsn2Q9Z0R6 1659 aa10.51□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Eya1P97767 591 aa10.51□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Jakmip1Q8BVL9 626 aa10.51□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Nsd3Q6P2L6 1439 aa10.51□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Knl1Q66JQ7 1612 aa10.51□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Gnl3lQ6PGG6 577 aaKnown RBP10.51□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Nap1l3Q794H2 544 aa10.51□□□□□ -0.73
Pkp4-203ENSMUST00000112577 PogkQ80TC5 607 aa10.51□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Pik3r4Q8VD65 1358 aa10.51□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Iqgap3F8VQ29 1632 aa10.51□□□□□ -0.73
Pkp4-203ENSMUST00000112577 GnpatP98192 678 aa10.5□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Aldh8a1Q8BH00 487 aa10.5□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Nol11Q8BJW5 723 aaKnown RBP10.5□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Isy1Q69ZQ2 285 aaKnown RBP10.5□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Ddrgk1Q80WW9 315 aa10.5□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Cct4P80315 539 aaKnown RBP10.5□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Fam83gQ5SWY7 812 aa10.5□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Rad17Q6NXW6 688 aa10.5□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Gripap1Q8VD04 806 aa10.5□□□□□ -0.73
Pkp4-203ENSMUST00000112577 FanclQ9CR14 375 aa10.5□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Clasp1Q80TV8 1535 aaKnown RBP10.5□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Prim1P20664 417 aa10.5□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Amotl1Q9D4H4 968 aa10.5□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Kif4P33174 1231 aa10.49□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Eif3bQ8JZQ9 803 aaKnown RBP10.49□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Stard3nlQ9DCI3 235 aa10.49□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Pdcd11Q6NS46 1862 aaKnown RBP10.49□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Terf2O35144 541 aa10.49□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Farp2Q91VS8 1065 aa10.49□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Speer4bQ9D9F7 267 aa10.49□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Psma5Q9Z2U1 241 aaKnown RBP10.49□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Gm973E9Q295 1059 aa10.49□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Rrp12Q6P5B0 1295 aaKnown RBP10.49□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Nlgn1Q99K10 843 aa10.49□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Gm21663A0A0G2JE01 267 aa10.48□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Gm7361D3Z6R1 267 aa10.48□□□□□ -0.73
Pkp4-203ENSMUST00000112577 5031410I06RikE9Q4E0 267 aa10.48□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Gm1979E9QAN3 267 aa10.48□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Gm5862K7N5V5 267 aa10.48□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Gm10220K7N660 267 aa10.48□□□□□ -0.73
Pkp4-203ENSMUST00000112577 CrebrfQ8CDG5 640 aaKnown RBP10.48□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Sf3a1Q8K4Z5 791 aaKnown RBP10.48□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Echdc1Q9D9V3 322 aa10.48□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Ppp1r3fQ9JIG4 799 aa10.48□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Scaf1Q5U4C3 1256 aaKnown RBP10.48□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Amotl2Q8K371 772 aa10.48□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Mum1Q6DID5 682 aa10.48□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Q9D9S1 216 aa10.48□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Bcar3Q9QZK2 820 aa10.48□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Cdc42bpgQ80UW5 1551 aa10.48□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Gm21680A0A0G2JGR8 267 aa10.47□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Idi1P58044 227 aa10.47□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Q4VA45 678 aa10.47□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Rhot2Q8JZN7 620 aa10.47□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Flad1Q8R123 492 aa10.47□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Top1mtQ8R4U6 593 aa10.47□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Adam1bQ8R534 806 aa10.47□□□□□ -0.73
Pkp4-203ENSMUST00000112577 ZgpatQ8VDM1 511 aa10.47□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Gm10093D3YYI8 482 aa10.47□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Hdac1O09106 482 aaKnown RBP10.47□□□□□ -0.73
Pkp4-203ENSMUST00000112577 CenppQ9CZ92 286 aa10.47□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Fam50bQ9WTJ8 334 aa10.47□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Hoxc9P09633 260 aa10.47□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Smg7Q5RJH6 1138 aaKnown RBP10.47□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Kiaa0556Q8C753 1610 aa10.47□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Dip2cE9PWR4 1557 aa10.46□□□□□ -0.73
Pkp4-203ENSMUST00000112577 Dzip1Q8BMD2 852 aa10.46□□□□□ -0.74
Pkp4-203ENSMUST00000112577 Q8BT18 775 aa10.46□□□□□ -0.74
Pkp4-203ENSMUST00000112577 Clstn1Q9EPL2 979 aa10.46□□□□□ -0.74
Pkp4-203ENSMUST00000112577 Uhrf1bp1lA2RSJ4 1457 aa10.46□□□□□ -0.74
Pkp4-203ENSMUST00000112577 Prex1Q69ZK0 1650 aa10.45□□□□□ -0.74
Pkp4-203ENSMUST00000112577 Zcchc11B2RX14 1644 aaKnown RBP10.45□□□□□ -0.74
Pkp4-203ENSMUST00000112577 Dixdc1Q80Y83 711 aa10.45□□□□□ -0.74
Pkp4-203ENSMUST00000112577 Nol12Q8BG17 217 aa10.45□□□□□ -0.74
Pkp4-203ENSMUST00000112577 Ccer1Q9CQL2 403 aa10.45□□□□□ -0.74
Pkp4-203ENSMUST00000112577 Dnajc10Q9DC23 793 aa10.45□□□□□ -0.74
Pkp4-203ENSMUST00000112577 Med14A2ABV5 1459 aaKnown RBP10.45□□□□□ -0.74
Pkp4-203ENSMUST00000112577 Ak9G3UYQ4 1894 aa10.45□□□□□ -0.74
Pkp4-203ENSMUST00000112577 Cspp1B2RX88 1205 aa10.45□□□□□ -0.74
Pkp4-203ENSMUST00000112577 Atp8b2P98199 1209 aa10.45□□□□□ -0.74
Pkp4-203ENSMUST00000112577 Ccdc155Q80VJ8 648 aa10.45□□□□□ -0.74
Pkp4-203ENSMUST00000112577 Tecpr2Q3UH45 1423 aa10.45□□□□□ -0.74
Pkp4-203ENSMUST00000112577 Sh3bgrQ9WUZ7 214 aa10.44□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms