RNA–Protein interactions for RNA: ENSMUST00000088171.10

Rtn3-204, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 4,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-204ENSMUST00000088171 Ddrgk1Q80WW9 315 aa12.4□□□□□ -0.42
Rtn3-204ENSMUST00000088171 Samm50Q8BGH2 469 aa12.4□□□□□ -0.42
Rtn3-204ENSMUST00000088171 Fsd2Q8BZ52 692 aa12.4□□□□□ -0.42
Rtn3-204ENSMUST00000088171 Slc13a4Q8BZ82 625 aa12.4□□□□□ -0.42
Rtn3-204ENSMUST00000088171 Wasf1Q8R5H6 559 aa12.4□□□□□ -0.42
Rtn3-204ENSMUST00000088171 TimelessQ9R1X4 1197 aa12.4□□□□□ -0.42
Rtn3-204ENSMUST00000088171 Nsrp1Q5NCR9 542 aa12.4□□□□□ -0.42
Rtn3-204ENSMUST00000088171 Kif4P33174 1231 aa12.4□□□□□ -0.42
Rtn3-204ENSMUST00000088171 Usp48Q3V0C5 1052 aa12.4□□□□□ -0.42
Rtn3-204ENSMUST00000088171 Nup133Q8R0G9 1155 aa12.4□□□□□ -0.42
Rtn3-204ENSMUST00000088171 SelenooQ9DBC0 667 aa12.4□□□□□ -0.42
Rtn3-204ENSMUST00000088171 CastP51125 788 aa12.4□□□□□ -0.42
Rtn3-204ENSMUST00000088171 Zranb1Q7M760 708 aa12.4□□□□□ -0.42
Rtn3-204ENSMUST00000088171 Slc14a2Q8R4T9 930 aa12.4□□□□□ -0.42
Rtn3-204ENSMUST00000088171 Lmbr1Q9JIT0 490 aa12.4□□□□□ -0.42
Rtn3-204ENSMUST00000088171 Gimap8Q75N62 688 aa12.39□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Rprd2Q6NXI6 1469 aaKnown RBP12.39□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Ncf1Q09014 390 aa12.39□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Gripap1Q8VD04 806 aa12.39□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Mipol1Q9D9F8 279 aa12.39□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Exoc6bA6H5Z3 810 aa12.39□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Cadps2Q8BYR5 1297 aa12.39□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Dhx8A2A4P0 1244 aaKnown RBP12.38□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Svs3aF2Z472 265 aa12.38□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Arhgef18Q6P9R4 1021 aa12.38□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Anp32eP97822 260 aaKnown RBP12.38□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Cabp2Q9JLK4 216 aa12.38□□□□□ -0.43
Rtn3-204ENSMUST00000088171 IbtkQ6ZPR6 1352 aaKnown RBP12.38□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Arhgef5E9Q7D5 1581 aa12.38□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Disp1Q3TDN0 1521 aa12.37□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Kcnj4P52189 445 aa12.37□□□□□ -0.43
Rtn3-204ENSMUST00000088171 VeztQ3ZK22 780 aa12.37□□□□□ -0.43
Rtn3-204ENSMUST00000088171 TmpoQ61033 693 aaKnown RBP12.37□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Kiaa1524Q8BWY9 907 aa12.37□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Ssr1Q9CY50 286 aaKnown RBP12.37□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Rrp12Q6P5B0 1295 aaKnown RBP12.37□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Tnni2P13412 182 aa12.37□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Themis2Q91YX0 663 aa12.37□□□□□ -0.43
Rtn3-204ENSMUST00000088171 DesP31001 469 aaKnown RBP12.37□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Cdc45Q9Z1X9 566 aa12.37□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Mug1P28665 1476 aa12.36□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Rfx1P48377 963 aa12.36□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Mns1Q61884 491 aa12.36□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Eif4g3Q80XI3 1579 aaKnown RBP12.36□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Cwc27Q3TKY6 469 aa12.36□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Fchsd2Q3USJ8 740 aa12.36□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Glg1Q61543 1175 aaKnown RBP12.36□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Nutm1Q8BHP2 1126 aa12.36□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Samd9lQ69Z37 1561 aa12.36□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Cdan1Q8CC12 1239 aa12.36□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Matr3Q8K310 846 aaKnown RBP12.36□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Ginm1Q91WR6 327 aa12.36□□□□□ -0.43
Rtn3-204ENSMUST00000088171 NppbP40753 121 aa12.36□□□□□ -0.43
Rtn3-204ENSMUST00000088171 4933402E13RikQ9D4D2 429 aa12.36□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Tmem87aQ8BXN9 555 aa12.35□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Epb41l2O70318 988 aaKnown RBP12.35□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Snx25Q3ZT31 840 aa12.35□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Prpf4bQ61136 1007 aaKnown RBP12.35□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Ddx58Q6Q899 926 aa12.35□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Ppp1r21Q3TDD9 780 aa12.35□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Dusp9Q7TNL7 452 aa12.35□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Adck5Q80V03 582 aa12.35□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Fermt2Q8CIB5 680 aa12.35□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Izumo3A6PWV3 263 aa12.34□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Eif5P59325 429 aaKnown RBP12.34□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Ggnbp2Q5SV77 696 aa12.34□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Nek4Q9Z1J2 792 aa12.34□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Zc3h12cQ5DTV4 884 aa12.34□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Cnksr2Q80YA9 1032 aa12.34□□□□□ -0.43
Rtn3-204ENSMUST00000088171 AnlnQ8K298 1121 aaKnown RBP12.34□□□□□ -0.43
Rtn3-204ENSMUST00000088171 TxlnbQ8VBT1 685 aa12.34□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Rrs1Q9CYH6 365 aaKnown RBP12.34□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Nphp3Q7TNH6 1325 aa12.34□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Gm7347D3YYI9 267 aa12.33□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Speer4aF8VPX6 267 aa12.33□□□□□ -0.43
Rtn3-204ENSMUST00000088171 NapbP28663 298 aa12.33□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Larp1Q6ZQ58 1072 aaKnown RBP12.33□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Fsd1Q7TPM6 496 aa12.33□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Ush1cQ9ES64 910 aa12.33□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Naip2Q9QUK4 1447 aa12.33□□□□□ -0.43
Rtn3-204ENSMUST00000088171 Dixdc1Q80Y83 711 aa12.33□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Rnf41Q8BH75 317 aa12.33□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Dydc2Q9D3X8 139 aa12.33□□□□□ -0.44
Rtn3-204ENSMUST00000088171 ParvgQ9ERD8 331 aa12.33□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Cfap74Q3UY96 1578 aa12.33□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Shroom2A2ALU4 1481 aa12.33□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Terf1P70371 421 aa12.33□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Nup160Q9Z0W3 1402 aaKnown RBP12.33□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Map3k13Q1HKZ5 959 aa12.33□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Mum1Q6DID5 682 aa12.32□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Gcc1Q9D4H2 778 aa12.32□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Mapkbp1Q6NS57 1503 aa12.32□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Ddb1Q3U1J4 1140 aaKnown RBP12.32□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Spty2d1Q68FG3 682 aa12.32□□□□□ -0.44
Rtn3-204ENSMUST00000088171 NsmfQ99NF2 532 aa12.32□□□□□ -0.44
Rtn3-204ENSMUST00000088171 InhbeO08717 350 aa12.32□□□□□ -0.44
Rtn3-204ENSMUST00000088171 SkilQ60665 675 aa12.32□□□□□ -0.44
Rtn3-204ENSMUST00000088171 AidaQ8C4Q6 305 aa12.32□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Ipo9Q91YE6 1041 aa12.32□□□□□ -0.44
Rtn3-204ENSMUST00000088171 Hs6st3Q9QYK4 470 aa12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms