RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Ppp1r15aP17564 657 aa12.24□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Znf692Q3U381 531 aa12.24□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Rnf214Q8BFU3 668 aaKnown RBP12.24□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Trim11Q99PQ2 467 aa12.24□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Ccdc172Q810N9 267 aa12.24□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Nup88Q8CEC0 753 aaKnown RBP12.24□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Cdk19Q8BWD8 501 aa12.24□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Stk3Q9JI10 497 aa12.24□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Arid4aF8VPQ2 1261 aaKnown RBP12.23□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Nectin2P32507 530 aa12.23□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Cdc37l1Q9CZP7 335 aa12.23□□□□□ -0.45
Scn8a-201ENSMUST00000082209 4930572O03RikQ8C5Y0 211 aa12.23□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Abcd1P48410 736 aa12.23□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Jakmip1Q8BVL9 626 aa12.23□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Rrbp1Q99PL5 1605 aaKnown RBP12.23□□□□□ -0.45
Scn8a-201ENSMUST00000082209 RalgapbQ8BQZ4 1484 aa12.23□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Top1mtQ8R4U6 593 aa12.22□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Ccdc102aQ3TMW1 549 aa12.22□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Gm45140A0A0N4SUM8 220 aa12.22□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Prpf4bQ61136 1007 aaKnown RBP12.22□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Cep89Q9CZX2 791 aa12.22□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Q9D9H8 365 aa12.22□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Larp1Q6ZQ58 1072 aaKnown RBP12.22□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Ppip5k2Q6ZQB6 1129 aa12.22□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Trim34aQ99PP6 485 aa12.22□□□□□ -0.45
Scn8a-201ENSMUST00000082209 PrxO55103 1391 aa12.22□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Pafah1b1P63005 410 aaKnown RBP12.21□□□□□ -0.45
Scn8a-201ENSMUST00000082209 ItpripQ3TNL8 555 aa12.21□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Ctage5Q8R311 779 aa12.21□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Cetn2Q9R1K9 172 aa12.21□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Gm10471E9Q1C7 252 aa12.21□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Olfml1Q8BSH2 233 aa12.21□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Zmym3Q9JLM4 1370 aa12.21□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Cnnm1Q0GA42 951 aa12.21□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Cwc27Q3TKY6 469 aa12.21□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Stxbp4Q9WV89 557 aa12.21□□□□□ -0.45
Scn8a-201ENSMUST00000082209 Eif2ak4Q9QZ05 1648 aa12.21□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Olr1Q9EQ09 363 aa12.21□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Paf1Q8K2T8 535 aa12.21□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Eif5P59325 429 aaKnown RBP12.21□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Fsd2Q8BZ52 692 aa12.21□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Gtf3c5Q8R2T8 520 aa12.21□□□□□ -0.46
Scn8a-201ENSMUST00000082209 TimelessQ9R1X4 1197 aa12.2□□□□□ -0.46
Scn8a-201ENSMUST00000082209 OvosQ3UU35 1456 aa12.2□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Btbd11Q6GQW0 1109 aa12.2□□□□□ -0.46
Scn8a-201ENSMUST00000082209 GphnQ8BUV3 769 aaKnown RBP12.2□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Hmg20bQ9Z104 317 aa12.2□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Fez2Q6TYB5 348 aa12.2□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Fsd1Q7TPM6 496 aa12.2□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Q7TT23 1179 aa12.2□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Cog6Q8R3I3 657 aa12.2□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Sel1lQ9Z2G6 790 aa12.2□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Phlpp2Q8BXA7 1320 aa12.19□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Gbp4Q61107 620 aa12.19□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Smc5Q8CG46 1101 aaKnown RBP12.19□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Kank1E9Q238 1360 aa12.19□□□□□ -0.46
Scn8a-201ENSMUST00000082209 CastP51125 788 aa12.19□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Hvcn1Q3U2S8 269 aa12.19□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Igbp1bQ9QZ29 343 aa12.19□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Mctp1E9PV86 951 aa12.19□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Nutm1Q8BHP2 1126 aa12.19□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Slc13a4Q8BZ82 625 aa12.19□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Gm1979E9QAN3 267 aa12.19□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Fam43aQ8BUP8 424 aa12.19□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Apaf1O88879 1249 aa12.19□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Map3k5O35099 1380 aa12.19□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Talpid3E9PV87 1520 aa12.19□□□□□ -0.46
Scn8a-201ENSMUST00000082209 BcanQ61361 883 aa12.18□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Paxbp1P58501 919 aa12.18□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Clul1Q3ZRW6 464 aa12.18□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Naa15Q80UM3 865 aaKnown RBP12.18□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Eif3bQ8JZQ9 803 aaKnown RBP12.18□□□□□ -0.46
Scn8a-201ENSMUST00000082209 IncenpQ9WU62 880 aa12.18□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Plxnc1Q9QZC2 1574 aa12.18□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Prr29B1ARI9 187 aa12.18□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Ssh1Q76I79 1042 aa12.18□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Gm44503E9PYU5 387 aa12.18□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Znf771Q8BJ90 317 aa12.18□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Cep55Q8BT07 462 aa12.17□□□□□ -0.46
Scn8a-201ENSMUST00000082209 ZwintQ9CQU5 252 aa12.17□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Fancd2Q80V62 1450 aa12.17□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Rnf41Q8BH75 317 aa12.17□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Lamb3Q61087 1168 aa12.17□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Ptpdc1Q6NZK8 747 aa12.17□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Fkbp5Q64378 456 aa12.17□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Hoxb7P09024 217 aa12.17□□□□□ -0.46
Scn8a-201ENSMUST00000082209 AidaQ8C4Q6 305 aa12.17□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Ripk4Q9ERK0 786 aa12.16□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Shroom2A2ALU4 1481 aa12.16□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Dhx9O70133 1380 aaKnown RBP12.16□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Zfp644E9QA22 1323 aa12.16□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Ube2hP62257 183 aa12.16□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Elp1Q7TT37 1333 aaKnown RBP12.16□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Tsg101Q61187 391 aa12.16□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Cul7Q8VE73 1689 aa12.16□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Gm21671G3UY31 267 aa12.16□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Gbp8Q2V6D6 525 aa12.16□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Zranb3Q6NZP1 1069 aa12.16□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Ampd3O08739 766 aa12.15□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Lrrfip2Q91WK0 415 aa12.15□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms