RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Naip2Q9QUK4 1447 aa10.98□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Terf2O35144 541 aa10.98□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Plekhm2Q80TQ5 1018 aa10.98□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Iqca1Q9CUL5 857 aa10.98□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Rasa1E9PYG6 1038 aa10.98□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Cfap45Q9D9U9 551 aa10.98□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 DmtnQ9WV69 405 aa10.98□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Prkar2bP31324 416 aa10.98□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Map9Q3TRR0 646 aa10.98□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Q4VA45 678 aa10.98□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Ccdc39Q9D5Y1 937 aa10.98□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Cyp26c1B2RXA7 518 aa10.98□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Cct4P80315 539 aaKnown RBP10.97□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Tbc1d9Q3UYK3 1264 aa10.97□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Liat1Q810M6 228 aa10.97□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Slc26a8Q8R0C3 999 aa10.97□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Ppp1r42Q8R1Z4 357 aa10.97□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 IkQ9Z1M8 557 aaKnown RBP10.97□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Gsdma2Q32M21 443 aa10.97□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Krt84Q99M73 603 aa10.97□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Klf15Q9EPW2 415 aa10.97□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Adcy5P84309 1262 aa10.97□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Sf3b2Q3UJB0 878 aaKnown RBP10.97□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 HnrnpmQ9D0E1 729 aaKnown RBP10.97□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Bcar3Q9QZK2 820 aa10.97□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Pcf11G3X9Z4 1553 aa10.97□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Gm21698A0A087WQP8 267 aa10.96□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Gm21671G3UY31 267 aa10.96□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Ppm1eQ80TL0 749 aa10.96□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Bag4Q8CI61 457 aa10.96□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Gm7361D3Z6R1 267 aa10.96□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Pafah1b1P63005 410 aaKnown RBP10.96□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 Uri1Q3TLD5 531 aa10.96□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 4931400O07RikQ9D4M5 137 aa10.96□□□□□ -0.65
Prpf40a-201ENSMUST00000076313 PogzQ8BZH4 1409 aaKnown RBP10.96□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Adck5Q80V03 582 aa10.96□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Ncoa1P70365 1447 aa10.96□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Ssr1Q9CY50 286 aaKnown RBP10.96□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Speer4bQ9D9F7 267 aa10.96□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Lmbr1Q9JIT0 490 aa10.96□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 NexmifQ5DTT1 1515 aa10.96□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Gbp4Q61107 620 aa10.96□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 SrrtQ99MR6 875 aaKnown RBP10.96□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 NinlQ6ZQ12 1394 aa10.95□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Gm21663A0A0G2JE01 267 aa10.95□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 5031410I06RikE9Q4E0 267 aa10.95□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Gm1979E9QAN3 267 aa10.95□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Gm5862K7N5V5 267 aa10.95□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Gm10220K7N660 267 aa10.95□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Rbm27Q5SFM8 1060 aaKnown RBP10.95□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Serpina10Q8R121 448 aa10.95□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Rrs1Q9CYH6 365 aaKnown RBP10.95□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Fgd6Q69ZL1 1399 aa10.95□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Hoxa7P02830 229 aa10.95□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 AidaQ8C4Q6 305 aa10.95□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 BbxQ8VBW5 907 aa10.95□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Ccdc83Q9D4V3 305 aa10.95□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Pde1cQ64338 706 aa10.95□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Trim34bJ3QNR8 485 aa10.94□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Cavin1O54724 392 aa10.94□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Hs1bp3Q3TC93 395 aa10.94□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Ddx19aQ61655 478 aaKnown RBP10.94□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Sall3Q62255 1320 aa10.94□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 EvcP57680 1005 aa10.94□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Sos1Q62245 1319 aa10.94□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Ccdc66Q6NS45 935 aa10.94□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 ImmtQ8CAQ8 757 aaKnown RBP10.94□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 TnikP83510 1323 aa10.94□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Phlpp2Q8BXA7 1320 aa10.94□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Gm42641I6L9G2 585 aa10.93□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Ell2Q3UKU1 639 aa10.93□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 AtripQ8BMG1 785 aa10.93□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Maats1Q8BRC6 783 aa10.93□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Luzp1Q8R4U7 1068 aaKnown RBP10.93□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Kank1E9Q238 1360 aa10.93□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Fkbp5Q64378 456 aa10.93□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Ercc6lQ8BHK9 1240 aa10.93□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Gimap6Q8K349 305 aa10.93□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Stxbp4Q9WV89 557 aa10.93□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Gse1Q3U3C9 1213 aa10.93□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Q3UPC7 1272 aa10.93□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Flad1Q8R123 492 aa10.93□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Dydc1Q9D9T0 175 aa10.93□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Aplp1Q03157 653 aa10.93□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Wasf1Q8R5H6 559 aa10.93□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 EprsQ8CGC7 1512 aaKnown RBP10.93□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 A2mQ6GQT1 1474 aa10.93□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 TxlnbQ8VBT1 685 aa10.93□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Ddx58Q6Q899 926 aa10.92□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Pdcl2Q78Y63 240 aa10.92□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Ltv1Q6NSQ7 470 aaKnown RBP10.92□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Znf131Q8K3J5 619 aa10.92□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Tmc2Q8R4P4 888 aa10.92□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Plb1Q3TTY0 1478 aa10.92□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Exoc8Q6PGF7 716 aa10.92□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Cep55Q8BT07 462 aa10.92□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Gm14025A2AP89 1413 aa10.92□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Gm21680A0A0G2JGR8 267 aa10.92□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 Tbc1d32Q3URV1 1296 aa10.92□□□□□ -0.66
Prpf40a-201ENSMUST00000076313 TkfcQ8VC30 578 aa10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 38.4 ms