RNA–Protein interactions for RNA: ENSMUST00000055296.10

Polr1a-201, Transcript of DNA-directed RNA polymerase I subunit RPA1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Polr1a, Length 9,216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1a-201ENSMUST00000055296 Shtn1Q8K2Q9 631 aa10.21□□□□□ -0.77
Polr1a-201ENSMUST00000055296 Fbln2P37889 1221 aa10.21□□□□□ -0.77
Polr1a-201ENSMUST00000055296 KarsQ99MN1 595 aaKnown RBP10.21□□□□□ -0.77
Polr1a-201ENSMUST00000055296 LrpprcQ6PB66 1392 aaKnown RBP10.21□□□□□ -0.77
Polr1a-201ENSMUST00000055296 Fam107bQ3TGF2 131 aa10.21□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Cdkl5Q3UTQ8 938 aa10.21□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Atf3Q60765 181 aa10.21□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Tsg101Q61187 391 aa10.21□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Ccdc39Q9D5Y1 937 aa10.21□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Riok3Q9DBU3 519 aaKnown RBP10.21□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Cep162Q6ZQ06 1403 aa10.21□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Mybbp1aQ7TPV4 1344 aaKnown RBP10.21□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Ccdc172Q810N9 267 aa10.21□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Ccdc73Q8CDM4 1066 aa10.21□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Mxra7Q9CZH7 178 aa10.21□□□□□ -0.78
Polr1a-201ENSMUST00000055296 TefQ9JLC6 301 aa10.2□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Nup155Q99P88 1391 aaKnown RBP10.2□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Gas8Q60779 478 aa10.2□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Caprin2Q05A80 1031 aaKnown RBP10.2□□□□□ -0.78
Polr1a-201ENSMUST00000055296 BlvraQ9CY64 295 aa10.2□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Stxbp4Q9WV89 557 aa10.2□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Krt85Q9Z2T6 507 aa10.2□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Ripk4Q9ERK0 786 aa10.2□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Ctr9Q62018 1173 aaKnown RBP10.2□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Fam184aE9PW83 1143 aa10.19□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Cnnm1Q0GA42 951 aa10.19□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Samm50Q8BGH2 469 aa10.19□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Mrc2Q64449 1479 aa10.19□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Sh2d4bA6X942 431 aa10.19□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Spty2d1Q68FG3 682 aa10.19□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Dhx29Q6PGC1 1365 aaKnown RBP10.19□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Gjc1P28229 396 aa10.19□□□□□ -0.78
Polr1a-201ENSMUST00000055296 PdiltQ9DAN1 588 aa10.19□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Dusp27Q148W8 1138 aa10.19□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Stard8Q8K031 1019 aa10.19□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Fsd2Q8BZ52 692 aa10.19□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Epb41l2O70318 988 aaKnown RBP10.19□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Krt7Q9DCV7 457 aa10.19□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Specc1lQ2KN98 1118 aaKnown RBP10.19□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Znf697Q569E7 569 aa10.19□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Trim58Q5NCC9 485 aa10.19□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Cdc45Q9Z1X9 566 aa10.19□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Urb2E9Q7L1 1524 aaKnown RBP10.19□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Jakmip3Q5DTN8 844 aa10.18□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Pdcl2Q78Y63 240 aa10.18□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Shq1Q7TMX5 569 aa10.18□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Nek5Q7TSC3 627 aa10.18□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Anapc15-psA0A140T8L6 141 aa10.18□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Gm1979E9QAN3 267 aa10.18□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Maats1Q8BRC6 783 aa10.18□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Znf394Q9Z1D9 521 aa10.18□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Mphosph9A6H5Y1 991 aa10.18□□□□□ -0.78
Polr1a-201ENSMUST00000055296 CebpzP53569 1052 aaKnown RBP10.18□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Apbb1ipQ8R5A3 670 aa10.18□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Arhgap5P97393 1501 aa10.18□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Carmil1Q6EDY6 1374 aa10.18□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Atp2b1G5E829 1220 aa10.18□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Cfap69Q8BH53 942 aa10.18□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Egfem1Q8C088 590 aa10.18□□□□□ -0.78
Polr1a-201ENSMUST00000055296 PrkcshO08795 521 aa10.18□□□□□ -0.78
Polr1a-201ENSMUST00000055296 FerP70451 823 aa10.18□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Krt84Q99M73 603 aa10.18□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Mkrn1Q9QXP6 481 aa10.18□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Gbp2Q9Z0E6 589 aa10.17□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Trim34bJ3QNR8 485 aa10.17□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Smc1bQ920F6 1248 aa10.17□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Fermt1P59113 677 aa10.17□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Gm21671G3UY31 267 aa10.17□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Trap1aP19473 224 aa10.17□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Gbp8Q2V6D6 525 aa10.17□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Tmem87aQ8BXN9 555 aa10.17□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Zeb2Q9R0G7 1215 aa10.17□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Mnat1P51949 309 aa10.17□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Ccdc88bQ4QRL3 1481 aa10.17□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Gnai1B2RSH2 354 aa10.17□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Ddx10Q80Y44 875 aaKnown RBP10.17□□□□□ -0.78
Polr1a-201ENSMUST00000055296 RbsnQ80Y56 783 aa10.17□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Fam177a1Q8BR63 207 aa10.17□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Usp11Q99K46 921 aa10.17□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Q9D5Q8 446 aa10.17□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Gnai3Q9DC51 354 aa10.17□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Gbp1Q01514 589 aa10.16□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Zkscan2G3X952 960 aa10.16□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Rfc1P35601 1131 aa10.16□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Pank1Q8K4K6 548 aa10.16□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Psmd6Q99JI4 389 aa10.16□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Zranb3Q6NZP1 1069 aa10.16□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Stard3nlQ9DCI3 235 aa10.16□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Gm21680A0A0G2JGR8 267 aa10.15□□□□□ -0.78
Polr1a-201ENSMUST00000055296 4933428M09RikQ9D3X3 192 aa10.15□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Spa17Q62252 149 aa10.15□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Cbfa2t2O70374 594 aa10.15□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Rufy2Q8R4C2 606 aa10.15□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Wasf1Q8R5H6 559 aa10.15□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Ces1hD3Z298 562 aa10.15□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Diaph2O70566 1098 aa10.15□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Inpp5dQ9ES52 1191 aa10.15□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Mcm3P25206 812 aaKnown RBP10.15□□□□□ -0.78
Polr1a-201ENSMUST00000055296 Fam13aQ8BGI4 693 aa10.15□□□□□ -0.79
Polr1a-201ENSMUST00000055296 Ttc19Q8CC21 365 aa10.15□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 8.1 ms