RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 Me1P06801 572 aa12.51□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Stk11ipQ3TAA7 1072 aa12.51□□□□□ -0.41
Nipbl-201ENSMUST00000052965 March6Q6ZQ89 909 aa12.51□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Jakmip1Q8BVL9 626 aa12.51□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Ssr1Q9CY50 286 aaKnown RBP12.51□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Mmel1Q9JLI3 765 aa12.51□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Zfp644E9QA22 1323 aa12.51□□□□□ -0.41
Nipbl-201ENSMUST00000052965 DroshaQ5HZJ0 1373 aaKnown RBP12.51□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Ms4a1P19437 291 aa12.51□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Ppfibp2O35711 882 aa12.51□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Ccdc93Q7TQK5 629 aa12.51□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Zeb2Q9R0G7 1215 aa12.51□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Sept6Q9R1T4 434 aa12.51□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Plcd3Q8K2J0 785 aa12.5□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Rasa1E9PYG6 1038 aa12.5□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Nutm1Q8BHP2 1126 aa12.5□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Zfp397Q7TNK4 527 aa12.5□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Strn4P58404 760 aa12.5□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Cfap53Q9D439 514 aa12.5□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Ccdc114Q3UX62 658 aa12.5□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Bms1Q6PGF5 1284 aaKnown RBP12.5□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Ercc6lQ8BHK9 1240 aa12.5□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Ttll5Q8CHB8 1328 aa12.5□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Map7d1A2AJI0 846 aa12.49□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Ggt6Q6PDE7 497 aa12.49□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Q8C5K5 320 aa12.49□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Frmpd1A2AKB4 1549 aa12.49□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Plekhd1B2RPU2 505 aa12.49□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Gm21671G3UY31 267 aa12.49□□□□□ -0.41
Nipbl-201ENSMUST00000052965 TxlnaQ6PAM1 554 aaKnown RBP12.49□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Wdr62Q3U3T8 1523 aa12.49□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Ccdc186Q8C9S4 917 aa12.48□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Zkscan5Q9Z1D8 819 aa12.48□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Tubb5P99024 444 aaKnown RBP12.48□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Babam1Q3UI43 333 aa12.48□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Cdkl5Q3UTQ8 938 aa12.48□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Vps53Q8CCB4 832 aa12.48□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Larp1Q6ZQ58 1072 aaKnown RBP12.48□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Fam135aQ6NS59 1506 aa12.48□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Nectin2P32507 530 aa12.48□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Map2k1P31938 393 aa12.48□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Prpf4bQ61136 1007 aaKnown RBP12.48□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Shtn1Q8K2Q9 631 aa12.48□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Neurod6P48986 337 aa12.48□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Nphp1Q9QY53 687 aa12.48□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Fbxo3Q9DC63 480 aa12.48□□□□□ -0.41
Nipbl-201ENSMUST00000052965 BicraF8VPZ9 1578 aa12.47□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Dpf1Q9QX66 387 aa12.47□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Spata24Q6P926 205 aa12.47□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Rhot2Q8JZN7 620 aa12.47□□□□□ -0.41
Nipbl-201ENSMUST00000052965 UvssaQ9D479 717 aa12.47□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Zmym3Q9JLM4 1370 aa12.47□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Eif5P59325 429 aaKnown RBP12.47□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Serpina10Q8R121 448 aa12.47□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Tbc1d8Q9Z1A9 1134 aa12.47□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Gm1043A0A140LJC2 1431 aa12.47□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Slc13a4Q8BZ82 625 aa12.47□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Stk3Q9JI10 497 aa12.47□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Gm1979E9QAN3 267 aa12.47□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Tspyl3Q3UYP3 334 aa12.47□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Gnl3lQ6PGG6 577 aaKnown RBP12.47□□□□□ -0.41
Nipbl-201ENSMUST00000052965 CrcpO35427 148 aa12.46□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Ehbp1Q69ZW3 1231 aa12.46□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Rapgef6Q5NCJ1 1609 aa12.46□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Fyb1O35601 819 aa12.46□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Lrrcc1Q69ZB0 1026 aa12.46□□□□□ -0.41
Nipbl-201ENSMUST00000052965 SarnpQ9D1J3 210 aaKnown RBP12.46□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Fchsd2Q3USJ8 740 aa12.46□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Skor1Q8BX46 964 aa12.46□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Fam76aQ922G2 307 aa12.46□□□□□ -0.41
Nipbl-201ENSMUST00000052965 Atp2b2Q9R0K7 1198 aa12.46□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Ccdc121E9Q6D3 323 aa12.46□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Cfdp1O88271 295 aaKnown RBP12.46□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Golga5Q9QYE6 729 aa12.46□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Gm7361D3Z6R1 267 aa12.46□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Fam163aQ8CAA5 168 aa12.46□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Cdc45Q9Z1X9 566 aa12.46□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Ccdc152E9PX14 254 aa12.45□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Dhx9O70133 1380 aaKnown RBP12.45□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Cdca8Q8BHX3 289 aa12.45□□□□□ -0.42
Nipbl-201ENSMUST00000052965 GmnnO88513 206 aa12.45□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Secisbp2lQ6A098 1086 aaKnown RBP12.45□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Mrc2Q64449 1479 aa12.45□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Stxbp4Q9WV89 557 aa12.45□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Tango6Q8C3S2 1079 aa12.45□□□□□ -0.42
Nipbl-201ENSMUST00000052965 PtprkP35822 1457 aa12.45□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Gzf1Q4VBD9 706 aa12.45□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Adck5Q80V03 582 aa12.45□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Brd3Q8K2F0 726 aaKnown RBP12.45□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Synpo2Q91YE8 1087 aaKnown RBP12.45□□□□□ -0.42
Nipbl-201ENSMUST00000052965 IbtkQ6ZPR6 1352 aaKnown RBP12.44□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Ano10Q8BH79 659 aa12.44□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Rufy2Q8R4C2 606 aa12.44□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Smco2Q9DA21 347 aa12.44□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Mcm3P25206 812 aaKnown RBP12.44□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Cpa2Q504N0 417 aa12.44□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Chd1lQ9CXF7 900 aa12.44□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Rprd2Q6NXI6 1469 aaKnown RBP12.44□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Gtf2f1Q3THK3 508 aaKnown RBP12.44□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Naa15Q80UM3 865 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 40.1 ms