RNA–Protein interactions for RNA: ENSMUST00000045312.5

Smc1a-201, Transcript of Structural maintenance of chromosomes protein 1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc1a, Length 4,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1a-201ENSMUST00000045312 Eif3aP23116 1344 aaKnown RBP8.33□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Nol10Q5RJG1 687 aaKnown RBP8.33□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Tmx1Q8VBT0 278 aa8.33□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Ccdc47Q9D024 483 aaKnown RBP8.33□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Shroom2A2ALU4 1481 aa8.33□□□□□ -1.08
Smc1a-201ENSMUST00000045312 BC005561E9Q5E2 1589 aa8.33□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Ccdc171E9Q1U1 1324 aa8.33□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Ttc21bQ0HA38 1315 aa8.33□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Wdr33Q8K4P0 1330 aaKnown RBP8.33□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Evc2Q8K1G2 1220 aa8.33□□□□□ -1.08
Smc1a-201ENSMUST00000045312 HmmrQ00547 794 aaKnown RBP8.32□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Pof1bQ8K4L4 587 aa8.32□□□□□ -1.08
Smc1a-201ENSMUST00000045312 ScaperF8VQ70 1398 aaKnown RBP8.32□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Phlpp2Q8BXA7 1320 aa8.32□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Gm21190A0A0G2JGJ6 266 aa8.32□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Nbr1P97432 988 aa8.32□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Tmx3Q8BXZ1 456 aa8.32□□□□□ -1.08
Smc1a-201ENSMUST00000045312 DonsonQ9QXP4 560 aa8.32□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Snw1Q9CSN1 536 aaKnown RBP8.32□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Ctr9Q62018 1173 aaKnown RBP8.32□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Rprd2Q6NXI6 1469 aaKnown RBP8.31□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Bloc1s4Q8VED2 215 aa8.31□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Nup160Q9Z0W3 1402 aaKnown RBP8.31□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Mindy4Q3UQI9 744 aa8.31□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Tbc1d9Q3UYK3 1264 aa8.31□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Trerf1Q8BXJ2 1205 aa8.31□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Fyb1O35601 819 aa8.31□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Gbp4Q61107 620 aa8.31□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Tshz2Q68FE9 1030 aa8.31□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Necab1Q8BG18 352 aa8.31□□□□□ -1.08
Smc1a-201ENSMUST00000045312 AI481877A2ALV5 1481 aa8.31□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Polr3aB2RXC6 1390 aa8.3□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Hspa4Q61316 841 aa8.3□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Ccdc93Q7TQK5 629 aa8.3□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Ccdc178Q8CDV0 866 aa8.3□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Phldb2Q8K1N2 1249 aa8.3□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Irx4Q9QY61 515 aa8.3□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Erich3F6QRE9 1637 aa8.3□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Gadd45bP22339 160 aa8.3□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Gtf2f1Q3THK3 508 aaKnown RBP8.3□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Snx13Q6PHS6 957 aa8.3□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Ythdc2B2RR83 1445 aaKnown RBP8.3□□□□□ -1.08
Smc1a-201ENSMUST00000045312 3425401B19RikD3Z1D3 1412 aa8.3□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Cfap73J3QPZ5 306 aa8.3□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Neurod6P48986 337 aa8.3□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Fnbp4Q6ZQ03 1031 aa8.3□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Ccdc73Q8CDM4 1066 aa8.3□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Rbm33Q9CXK9 1231 aaKnown RBP8.3□□□□□ -1.08
Smc1a-201ENSMUST00000045312 PhaxQ9JJT9 385 aaKnown RBP8.3□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Tbc1d8Q9Z1A9 1134 aa8.3□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Cavin4A2AMM0 362 aa8.29□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Hdgfl1Q2VPR5 283 aa8.29□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Zfp397Q7TNK4 527 aa8.29□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Atxn3Q9CVD2 355 aa8.29□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Nphp1Q9QY53 687 aa8.29□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Pik3c2gO70167 1506 aa8.29□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Peg3Q3URU2 1571 aa8.29□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Cfdp1O88271 295 aaKnown RBP8.29□□□□□ -1.08
Smc1a-201ENSMUST00000045312 ClasrpQ8CFC7 668 aa8.29□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Vps37cQ8R105 352 aa8.29□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Cep57l1Q8VDS7 400 aa8.29□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Sv2bQ8BG39 683 aa8.29□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Ercc6lQ8BHK9 1240 aa8.29□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Pbrm1Q8BSQ9 1634 aaKnown RBP8.29□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Irf5P56477 497 aa8.29□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Gsdma3Q5Y4Y6 464 aa8.29□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Brd2Q7JJ13 798 aaKnown RBP8.29□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Ppp6r1Q7TSI3 856 aa8.29□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Gm18336A0A140LIU8 765 aa8.28□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Gm10471E9Q1C7 252 aa8.28□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Nf2P46662 596 aa8.28□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Usp25P57080 1055 aa8.28□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Bbof1Q3V079 533 aa8.28□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Ankrd24Q80VM7 985 aa8.28□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Ncbp3Q8BZR9 615 aaKnown RBP8.28□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Naip5Q9R016 1403 aa8.28□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Dnai2A2AC93 623 aa8.28□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Mnat1P51949 309 aa8.28□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Smarcc1P97496 1104 aa8.28□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Mapkbp1Q6NS57 1503 aa8.28□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Gas2l3Q3UWW6 683 aa8.28□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Smarca5Q91ZW3 1051 aaKnown RBP8.28□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Magi3Q9EQJ9 1476 aa8.28□□□□□ -1.08
Smc1a-201ENSMUST00000045312 KdrP35918 1367 aa8.27□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Ktn1Q61595 1327 aaKnown RBP8.27□□□□□ -1.08
Smc1a-201ENSMUST00000045312 EvcP57680 1005 aa8.27□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Ube2hP62257 183 aa8.27□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Pafah1b1P63005 410 aaKnown RBP8.27□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Wwc1Q5SXA9 1104 aa8.27□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Prpf4bQ61136 1007 aaKnown RBP8.27□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Ccdc39Q9D5Y1 937 aa8.27□□□□□ -1.08
Smc1a-201ENSMUST00000045312 Gm10093D3YYI8 482 aa8.27□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Hdac1O09106 482 aaKnown RBP8.27□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Gng11P61953 73 aa8.27□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Als2cr12Q8BVM7 383 aa8.27□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Kdm4aQ8BW72 1064 aa8.27□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Slc13a4Q8BZ82 625 aa8.27□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Abcd1P48410 736 aa8.27□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Igsf3Q6ZQA6 1194 aa8.27□□□□□ -1.09
Smc1a-201ENSMUST00000045312 LarsQ8BMJ2 1178 aa8.27□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms