RNA–Protein interactions for RNA: ENSMUST00000043359.8

Smarca5-201, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smarca5, Length 6,113 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca5-201ENSMUST00000043359 Zmym3Q9JLM4 1370 aa17.25■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Ubxn4Q8VCH8 506 aa17.25■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Tpd52l2Q9CYZ2 220 aaKnown RBP17.25■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Eif5P59325 429 aaKnown RBP17.25■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Fam13aQ8BGI4 693 aa17.24■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Zbtb21E9Q444 1094 aa17.24■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Ccnl1Q52KE7 532 aaKnown RBP17.24■□□□□ 0.35
Smarca5-201ENSMUST00000043359 SkilQ60665 675 aa17.24■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Soga3Q6NZL0 945 aa17.24■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Nolc1E9Q5C9 702 aaKnown RBP17.24■□□□□ 0.35
Smarca5-201ENSMUST00000043359 AidaQ8C4Q6 305 aa17.23■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Ppp1r21Q3TDD9 780 aa17.23■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Zc3h12cQ5DTV4 884 aa17.23■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Cacna2d4Q5RJF7 1116 aa17.23■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Tmem132eQ6IEE6 982 aa17.23■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Iqca1Q9CUL5 857 aa17.23■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Ces1aE9PYP1 563 aa17.23■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Cyp26c1B2RXA7 518 aa17.23■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Myd88P22366 296 aa17.23■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Riok1Q922Q2 567 aa17.22■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Pdcd6ipQ9WU78 869 aaKnown RBP17.22■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Mcm10Q0VBD2 885 aa17.22■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Fam170aQ66LM6 333 aa17.22■□□□□ 0.35
Smarca5-201ENSMUST00000043359 NapbP28663 298 aa17.22■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Spg7Q3ULF4 781 aa17.22■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Cul5Q9D5V5 780 aa17.22■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Rrp12Q6P5B0 1295 aaKnown RBP17.21■□□□□ 0.35
Smarca5-201ENSMUST00000043359 SnrkQ8VDU5 748 aa17.21■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Hmgb2P30681 210 aaKnown RBP17.21■□□□□ 0.35
Smarca5-201ENSMUST00000043359 TimelessQ9R1X4 1197 aa17.21■□□□□ 0.35
Smarca5-201ENSMUST00000043359 TprnA2AI08 749 aaKnown RBP17.21■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Slc7a3P70423 618 aa17.21■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Larp1Q6ZQ58 1072 aaKnown RBP17.21■□□□□ 0.35
Smarca5-201ENSMUST00000043359 Cnnm3Q32NY4 713 aa17.2■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Brf1Q8CFK2 676 aa17.2■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Stim1P70302 685 aa17.2■□□□□ 0.34
Smarca5-201ENSMUST00000043359 2310002L09RikQ9D7L5 217 aa17.2■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Pde4dQ01063 747 aa17.2■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Irgm2A0A140LIF8 407 aa17.19■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Skida1Q80YR3 822 aa17.19■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Rab3gap2Q8BMG7 1366 aa17.19■□□□□ 0.34
Smarca5-201ENSMUST00000043359 ItpripQ3TNL8 555 aa17.19■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Ddb1Q3U1J4 1140 aaKnown RBP17.19■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Ccdc34Q3UI66 367 aa17.19■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Zbtb3Q91X45 518 aa17.19■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Rabep1O35551 862 aa17.19■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Ift74Q8BKE9 600 aa17.19■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Glipr1l2Q9CQ35 332 aa17.19■□□□□ 0.34
Smarca5-201ENSMUST00000043359 ParvgQ9ERD8 331 aa17.19■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Smarca5Q91ZW3 1051 aaKnown RBP17.18■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Abcd1P48410 736 aa17.18■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Hmgn5Q9JL35 406 aa17.18■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Cc2d2aQ8CFW7 1633 aa17.17■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Sh3d21Q7TSG5 549 aa17.17■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Qtrt2B8ZXI1 415 aa17.17■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Eme2Q56A04 373 aa17.17■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Ppip5k1A2ARP1 1436 aa17.17■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Top2aQ01320 1528 aaKnown RBP17.17■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Rhot2Q8JZN7 620 aa17.17■□□□□ 0.34
Smarca5-201ENSMUST00000043359 PtprkP35822 1457 aa17.16■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Ttc21bQ0HA38 1315 aa17.16■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Ppfia3P60469 1194 aa17.16■□□□□ 0.34
Smarca5-201ENSMUST00000043359 NefhP19246 1090 aa17.16■□□□□ 0.34
Smarca5-201ENSMUST00000043359 ImmtQ8CAQ8 757 aaKnown RBP17.15■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Znf287Q9EQB9 759 aa17.15■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Zrsr2Q62377 462 aaKnown RBP17.15■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Atl3Q91YH5 541 aa17.15■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Stxbp4Q9WV89 557 aa17.15■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Cyp2ab1S4R196 498 aa17.15■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Eno4Q8C042 619 aa17.15■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Zmynd15Q8C0R7 736 aa17.15■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Fez1Q8K0X8 392 aa17.15■□□□□ 0.34
Smarca5-201ENSMUST00000043359 CenphQ9QYM8 241 aa17.15■□□□□ 0.34
Smarca5-201ENSMUST00000043359 EprsQ8CGC7 1512 aaKnown RBP17.14■□□□□ 0.34
Smarca5-201ENSMUST00000043359 IbtkQ6ZPR6 1352 aaKnown RBP17.14■□□□□ 0.34
Smarca5-201ENSMUST00000043359 Prkg1P0C605 671 aa17.14■□□□□ 0.33
Smarca5-201ENSMUST00000043359 Usp5P56399 858 aaKnown RBP17.14■□□□□ 0.33
Smarca5-201ENSMUST00000043359 Epb41l2O70318 988 aaKnown RBP17.14■□□□□ 0.33
Smarca5-201ENSMUST00000043359 Gimap8Q75N62 688 aa17.14■□□□□ 0.33
Smarca5-201ENSMUST00000043359 Cog6Q8R3I3 657 aa17.14■□□□□ 0.33
Smarca5-201ENSMUST00000043359 Top1mtQ8R4U6 593 aa17.14■□□□□ 0.33
Smarca5-201ENSMUST00000043359 Mcm2P97310 904 aa17.14■□□□□ 0.33
Smarca5-201ENSMUST00000043359 Hdac9Q99N13 588 aa17.14■□□□□ 0.33
Smarca5-201ENSMUST00000043359 AnlnQ8K298 1121 aaKnown RBP17.14■□□□□ 0.33
Smarca5-201ENSMUST00000043359 Mipol1Q9D9F8 279 aa17.14■□□□□ 0.33
Smarca5-201ENSMUST00000043359 Ccdc172Q810N9 267 aa17.13■□□□□ 0.33
Smarca5-201ENSMUST00000043359 Ptcd1Q8C2E4 695 aaKnown RBP17.13■□□□□ 0.33
Smarca5-201ENSMUST00000043359 Homer1Q9Z2Y3 366 aa17.13■□□□□ 0.33
Smarca5-201ENSMUST00000043359 Cdkl5Q3UTQ8 938 aa17.13■□□□□ 0.33
Smarca5-201ENSMUST00000043359 Myom3A2ABU4 1439 aa17.13■□□□□ 0.33
Smarca5-201ENSMUST00000043359 Ptpdc1Q6NZK8 747 aa17.13■□□□□ 0.33
Smarca5-201ENSMUST00000043359 Zranb1Q7M760 708 aa17.13■□□□□ 0.33
Smarca5-201ENSMUST00000043359 Efcab2Q9CQ46 164 aa17.13■□□□□ 0.33
Smarca5-201ENSMUST00000043359 Snx25Q3ZT31 840 aa17.13■□□□□ 0.33
Smarca5-201ENSMUST00000043359 Cdc45Q9Z1X9 566 aa17.13■□□□□ 0.33
Smarca5-201ENSMUST00000043359 Stx8O88983 236 aa17.12■□□□□ 0.33
Smarca5-201ENSMUST00000043359 Ush1cQ9ES64 910 aa17.12■□□□□ 0.33
Smarca5-201ENSMUST00000043359 Olr1Q9EQ09 363 aa17.12■□□□□ 0.33
Smarca5-201ENSMUST00000043359 Ddx46Q569Z5 1032 aaKnown RBP17.12■□□□□ 0.33
Smarca5-201ENSMUST00000043359 Gpr162Q3UN16 588 aa17.12■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms