RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Tceanc2Q8R2M0 207 aa13.59□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Fgd6Q69ZL1 1399 aa13.58□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Ppfia3P60469 1194 aa13.58□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Mical1Q8VDP3 1048 aa13.58□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Gapvd1Q6PAR5 1458 aa13.58□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Adgrl2Q8JZZ7 1487 aa13.58□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Gm45015A0A140LII9 184 aa13.58□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Gm18336A0A140LIU8 765 aa13.58□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Bms1Q6PGF5 1284 aaKnown RBP13.58□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Sass6Q80UK7 654 aa13.58□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Gjb2Q00977 226 aa13.58□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Mknk2Q8CDB0 459 aa13.57□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Prim1P20664 417 aa13.57□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Fam83gQ5SWY7 812 aa13.57□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Kdm4aQ8BW72 1064 aa13.57□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Kiaa1551Q5DTW7 1521 aa13.57□□□□□ -0.24
Topbp1-201ENSMUST00000035164 AatkQ80YE4 1365 aa13.57□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Aldh8a1Q8BH00 487 aa13.57□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Nol11Q8BJW5 723 aaKnown RBP13.57□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Pola1P33609 1465 aa13.56□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Ccdc178Q8CDV0 866 aa13.56□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Q9D9S1 216 aa13.56□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Atg4a-psA0A0G2JFS9 396 aa13.56□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Mctp1E9PV86 951 aa13.56□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Fam184aE9PW83 1143 aa13.56□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Ccdc66Q6NS45 935 aa13.56□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Atg4aQ8C9S8 396 aa13.56□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Cchcr1Q8K2I2 770 aa13.56□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Kif21aQ9QXL2 1672 aa13.56□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Hnrnpul1Q8VDM6 859 aaKnown RBP13.55□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Slc52a2Q9D8F3 450 aa13.55□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Eif4g3Q80XI3 1579 aaKnown RBP13.55□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Lekr1B2RVN1 116 aa13.55□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Grpel1Q99LP6 217 aa13.55□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Ccer1Q9CQL2 403 aa13.55□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Cfap73J3QPZ5 306 aa13.54□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Gm21190A0A0G2JGJ6 266 aa13.54□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Snap23O09044 210 aa13.54□□□□□ -0.24
Topbp1-201ENSMUST00000035164 LlphQ9D945 130 aaKnown RBP13.54□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Stx6Q9JKK1 255 aa13.54□□□□□ -0.24
Topbp1-201ENSMUST00000035164 U2af2P26369 475 aaKnown RBP13.54□□□□□ -0.24
Topbp1-201ENSMUST00000035164 RestQ8VIG1 1082 aa13.54□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Tulp4Q9JIL5 1547 aa13.54□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Ptgs1P22437 602 aa13.54□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Zdhhc9P59268 364 aa13.54□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Bach2P97303 839 aa13.54□□□□□ -0.24
Topbp1-201ENSMUST00000035164 TnmdQ9EP64 317 aa13.54□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Myom2Q14BI5 1463 aa13.54□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Anp32cQ64G17 123 aa13.53□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Nup88Q8CEC0 753 aaKnown RBP13.53□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Ccdc94Q9D6J3 314 aa13.53□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Cdkn1cP49919 348 aa13.53□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Zfp251Q6PCX8 632 aa13.53□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Mrps27Q8BK72 415 aaKnown RBP13.53□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Atp10dQ8K2X1 1416 aa13.52□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Ppp1r15aP17564 657 aa13.52□□□□□ -0.24
Topbp1-201ENSMUST00000035164 Rbm42Q91V81 474 aaKnown RBP13.52□□□□□ -0.25
Topbp1-201ENSMUST00000035164 PdcQ9QW08 244 aa13.52□□□□□ -0.25
Topbp1-201ENSMUST00000035164 MpndQ3TV65 487 aa13.52□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Zbtb45Q52KG4 520 aa13.52□□□□□ -0.25
Topbp1-201ENSMUST00000035164 InsrP15208 1372 aa13.52□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Nup160Q9Z0W3 1402 aaKnown RBP13.51□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Exoc6bA6H5Z3 810 aa13.51□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Med4Q9CQA5 270 aa13.51□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Fkbp4P30416 458 aa13.51□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Top1mtQ8R4U6 593 aa13.51□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Zkscan7E9PVW1 718 aa13.51□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Mphosph10Q810V0 681 aaKnown RBP13.51□□□□□ -0.25
Topbp1-201ENSMUST00000035164 EngaseQ8BX80 734 aa13.51□□□□□ -0.25
Topbp1-201ENSMUST00000035164 R3hcc1Q8BSI6 488 aa13.51□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Brf1Q8CFK2 676 aa13.51□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Neurod6P48986 337 aa13.5□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Trpm2Q91YD4 1506 aa13.5□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Nom1Q3UFM5 854 aaKnown RBP13.5□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Idi2Q8BFZ6 227 aa13.5□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Elp1Q7TT37 1333 aaKnown RBP13.5□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Pdzrn3Q69ZS0 1063 aa13.5□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Nop14Q8R3N1 860 aaKnown RBP13.5□□□□□ -0.25
Topbp1-201ENSMUST00000035164 PaskQ8CEE6 1383 aa13.5□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Adamts13Q769J6 1426 aa13.49□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Ube2hP62257 183 aa13.49□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Nphp4P59240 1425 aa13.49□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Hook1Q8BIL5 728 aa13.49□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Pmfbp1Q9WVQ0 1022 aa13.49□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Tpx2A2APB8 745 aaKnown RBP13.49□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Safb2Q80YR5 991 aaKnown RBP13.49□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Ift57Q8BXG3 429 aa13.49□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Fmn2Q9JL04 1578 aa13.49□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Ano6Q6P9J9 911 aa13.48□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Plcd3Q8K2J0 785 aa13.48□□□□□ -0.25
Topbp1-201ENSMUST00000035164 NaspQ99MD9 773 aaKnown RBP13.48□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Afap1Q80YS6 731 aa13.48□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Kiaa0753Q6A000 959 aa13.48□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Drc7Q6V3W6 876 aa13.48□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Mlh1Q9JK91 760 aa13.48□□□□□ -0.25
Topbp1-201ENSMUST00000035164 ScaperF8VQ70 1398 aaKnown RBP13.48□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Usp25P57080 1055 aa13.48□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Strn4P58404 760 aa13.47□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Pnma3Q8JZW8 466 aa13.47□□□□□ -0.25
Topbp1-201ENSMUST00000035164 Ncapd2Q8K2Z4 1392 aa13.47□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms