RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Map7d2A2AG50 781 aa12.84□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Fnbp4Q6ZQ03 1031 aa12.84□□□□□ -0.35
Rnf40-201ENSMUST00000033088 NpatQ8BMA5 1420 aa12.84□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Adamts7Q68SA9 1657 aa12.84□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Calcoco2A2A6M5 331 aa12.83□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Q8C5K5 320 aa12.83□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Tceanc2Q8R2M0 207 aa12.83□□□□□ -0.35
Rnf40-201ENSMUST00000033088 Cgnl1Q6AW69 1298 aa12.83□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Stk31Q99MW1 1018 aa12.83□□□□□ -0.36
Rnf40-201ENSMUST00000033088 MpripP97434 1024 aa12.83□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Mcm10Q0VBD2 885 aa12.83□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Tceal9Q9DD24 104 aa12.83□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Mctp1E9PV86 951 aa12.82□□□□□ -0.36
Rnf40-201ENSMUST00000033088 U2af2P26369 475 aaKnown RBP12.82□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Zmym4A2A791 1549 aaKnown RBP12.82□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Setd1aE9PYH6 1716 aa12.82□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Map3k13Q1HKZ5 959 aa12.82□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Sass6Q80UK7 654 aa12.82□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Klhdc4Q921I2 584 aa12.82□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Swt1Q9DBQ9 907 aa12.82□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Ino80Q6ZPV2 1559 aa12.82□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Cep152A2AUM9 1736 aaKnown RBP12.82□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Afap1Q80YS6 731 aa12.82□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Rsph6aQ8CDR2 708 aa12.82□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Ehbp1l1Q99MS7 1716 aa12.81□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Smarce1O54941 411 aaKnown RBP12.81□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Knl1Q66JQ7 1612 aa12.81□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Q3UPC7 1272 aa12.81□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Scaf1Q5U4C3 1256 aaKnown RBP12.81□□□□□ -0.36
Rnf40-201ENSMUST00000033088 KinQ8K339 391 aa12.81□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Cetn4Q8K4K1 168 aa12.81□□□□□ -0.36
Rnf40-201ENSMUST00000033088 FanclQ9CR14 375 aa12.81□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Bcar3Q9QZK2 820 aa12.81□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Rims1Q99NE5 1463 aa12.81□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Tmem132aQ922P8 1018 aa12.81□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Neurod6P48986 337 aa12.8□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Cwc27Q3TKY6 469 aa12.8□□□□□ -0.36
Rnf40-201ENSMUST00000033088 KdrP35918 1367 aa12.8□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Ccdc173A0JLY1 547 aa12.8□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Trim25Q61510 634 aaKnown RBP12.8□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Hfm1D3Z4R1 1434 aa12.79□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Myom2Q14BI5 1463 aa12.79□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Anapc15-psA0A140T8L6 141 aa12.79□□□□□ -0.36
Rnf40-201ENSMUST00000033088 CtcfQ61164 736 aaKnown RBP12.79□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Mmel1Q9JLI3 765 aa12.79□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Cfdp1O88271 295 aaKnown RBP12.79□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Tex2Q6ZPJ0 1128 aaKnown RBP12.79□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Cabp4Q8VHC5 271 aa12.79□□□□□ -0.36
Rnf40-201ENSMUST00000033088 TnikP83510 1323 aa12.79□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Erc2Q6PH08 957 aa12.79□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Tmx3Q8BXZ1 456 aa12.79□□□□□ -0.36
Rnf40-201ENSMUST00000033088 PalmQ9Z0P4 383 aa12.79□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Skint5A7XUY5 1461 aa12.78□□□□□ -0.36
Rnf40-201ENSMUST00000033088 EvcP57680 1005 aa12.78□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Plekhm2Q80TQ5 1018 aa12.78□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Mrvi1Q9WUX5 899 aaKnown RBP12.78□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Uggt1Q6P5E4 1551 aa12.78□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Hook1Q8BIL5 728 aa12.78□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Glipr1l2Q9CQ35 332 aa12.78□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Fam114a1Q9D281 569 aa12.78□□□□□ -0.36
Rnf40-201ENSMUST00000033088 AppP12023 770 aa12.77□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Anp32eP97822 260 aaKnown RBP12.77□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Snx13Q6PHS6 957 aa12.77□□□□□ -0.36
Rnf40-201ENSMUST00000033088 R3hcc1Q8BSI6 488 aa12.77□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Phlpp2Q8BXA7 1320 aa12.77□□□□□ -0.36
Rnf40-201ENSMUST00000033088 Cavin4A2AMM0 362 aa12.77□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Wdr63B2RY71 923 aa12.77□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Cdkn1cP49919 348 aa12.77□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Safb2Q80YR5 991 aaKnown RBP12.77□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Isy1Q69ZQ2 285 aaKnown RBP12.77□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Q9D9H8 365 aa12.77□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Clcn1Q64347 994 aa12.76□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Znf704Q9ERQ3 566 aa12.76□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.76□□□□□ -0.37
Rnf40-201ENSMUST00000033088 EzrP26040 586 aaKnown RBP12.76□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Srgap3Q812A2 1099 aa12.76□□□□□ -0.37
Rnf40-201ENSMUST00000033088 TnmdQ9EP64 317 aa12.76□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Myo3aQ8K3H5 1613 aa12.76□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Prdm2A2A7B5 1709 aaKnown RBP12.76□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Sv2bQ8BG39 683 aa12.76□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Cchcr1Q8K2I2 770 aa12.75□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Ripk4Q9ERK0 786 aa12.75□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Erbb4Q61527 1308 aa12.75□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Cdc37l1Q9CZP7 335 aa12.75□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Uspl1Q3ULM6 1089 aa12.74□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Igsf3Q6ZQA6 1194 aa12.74□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Slc52a2Q9D8F3 450 aa12.74□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Mroh1E0CZ22 1640 aa12.74□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Ppm1eQ80TL0 749 aa12.74□□□□□ -0.37
Rnf40-201ENSMUST00000033088 CenpjQ569L8 1344 aa12.74□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Gnai1B2RSH2 354 aa12.74□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Eif5P59325 429 aaKnown RBP12.74□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Ccdc66Q6NS45 935 aa12.74□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Gnai3Q9DC51 354 aa12.74□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Qser1A2BIE1 1698 aa12.74□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Hvcn1Q3U2S8 269 aa12.73□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Ano6Q6P9J9 911 aa12.73□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Bin1O08539 588 aaKnown RBP12.73□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Prkar2bP31324 416 aa12.73□□□□□ -0.37
Rnf40-201ENSMUST00000033088 Ahdc1Q6PAL7 1594 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms