RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Siglec1Q62230 1695 aa16.71■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Col22a1E9Q7P1 1613 aa16.7■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Aldh1l1Q8R0Y6 902 aa16.7■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Tmem94Q7TSH8 1360 aa16.7■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 LifrP42703 1092 aa16.7■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 MarsQ68FL6 902 aaKnown RBP16.7■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Pank1Q8K4K6 548 aa16.69■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Gli3Q61602 1583 aa16.68■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Mcm2P97310 904 aa16.68■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Zranb1Q7M760 708 aa16.68■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Eif2s2Q99L45 331 aaKnown RBP16.68■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Irf5P56477 497 aa16.68■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Sipa1l2Q80TE4 1722 aa16.68■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Tnnt2P50752 301 aa16.67■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Isy1Q69ZQ2 285 aaKnown RBP16.67■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Rlbp1Q9Z275 317 aa16.67■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Gm10563F6WIE4 79 aa16.67■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Ksr2Q3UVC0 959 aa16.67■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Rbm25B2RY56 838 aaKnown RBP16.66■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Skap1Q3UUV5 355 aa16.66■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Dnajc14Q921R4 703 aa16.66■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Nsd3Q6P2L6 1439 aa16.66■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Sptbn5F6UCX4 1208 aa16.66■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Rsph6aQ8CDR2 708 aa16.66■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 MvpQ9EQK5 861 aa16.66■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Aldh8a1Q8BH00 487 aa16.65■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Polr3glQ8R0C0 218 aa16.65■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Ak7Q9D2H2 614 aa16.65■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 Atxn3Q9CVD2 355 aa16.65■□□□□ 0.26
Prpf38b-201ENSMUST00000029480 SkilQ60665 675 aa16.64■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 KnstrnQ9D9Z1 312 aaKnown RBP16.64■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 Nid2O88322 1403 aa16.63■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 Ankrd44B2RXR6 993 aa16.63■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 Phf23Q8BSN5 401 aa16.63■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 Tmem2Q5FWI3 1383 aa16.62■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 Hsp90ab1P11499 724 aaKnown RBP16.62■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 Slc12a5Q91V14 1138 aa16.62■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 Brd1E9PZ26 1189 aaKnown RBP16.62■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 Idi1P58044 227 aa16.62■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 HnrnpuQ8VEK3 800 aaKnown RBP16.62■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 G3bp1P97855 465 aaKnown RBP16.61■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 Q3UPC7 1272 aa16.61■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 Cyb5rlB1AS42 316 aa16.61■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 Ano8Q6PB70 1060 aa16.6■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 Slain2Q8CI08 581 aa16.6■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 Casz1Q9CWL2 1761 aa16.6■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 Anapc15-psA0A140T8L6 141 aa16.6■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 Vamp4O70480 141 aa16.6■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 Sparcl1P70663 650 aa16.6■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 Cdc37l1Q9CZP7 335 aa16.6■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 FancaQ9JL70 1439 aa16.59■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 KarsQ99MN1 595 aaKnown RBP16.59■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 Gcc1Q9D4H2 778 aa16.59■□□□□ 0.25
Prpf38b-201ENSMUST00000029480 Gm10093D3YYI8 482 aa16.58■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Hdac1O09106 482 aaKnown RBP16.58■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 PalmQ9Z0P4 383 aa16.58■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Apaf1O88879 1249 aa16.58■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Kdm4cQ8VCD7 1054 aa16.57■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Tmed8Q3UHI4 326 aa16.57■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Ppp6r1Q7TSI3 856 aa16.57■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Pip4k2bQ80XI4 416 aa16.57■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Nfat5Q9WV30 1534 aa16.56■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Tm6sf1P58749 370 aa16.56■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Plekhm2Q80TQ5 1018 aa16.56■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Ahnak2E9PYB0 1738 aaKnown RBP16.55■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Msh6P54276 1358 aaKnown RBP16.55■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Abcc12Q80WJ6 1366 aa16.55■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Dlg5E9Q9R9 1921 aa16.55■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Nup153E9Q3G8 1462 aaKnown RBP16.54■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 DccP70211 1447 aa16.54■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Kif20aP97329 887 aa16.54■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Ap3b2Q9JME5 1082 aa16.54■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Sh3bp1P55194 680 aa16.54■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Gpatch11Q3UFS4 262 aa16.54■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Gm6268A2A3U9 297 aa16.53■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Chl1P70232 1209 aa16.53■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Kdm6aO70546 1401 aa16.53■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Kcna6Q61923 529 aa16.52■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Maco1Q7TQE6 664 aaKnown RBP16.52■□□□□ 0.24
Prpf38b-201ENSMUST00000029480 Amigo3Q8C2S7 508 aa16.52■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 Lekr1B2RVN1 116 aa16.51■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 Rangap1P46061 589 aaKnown RBP16.51■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 Stac3Q8BZ71 360 aa16.51■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 Ccdc60Q8C4J0 545 aa16.51■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 Phf14Q9D4H9 881 aa16.51■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 ErmnQ5EBJ4 281 aa16.5■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 Noc3lQ8VI84 807 aaKnown RBP16.5■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 Elp1Q7TT37 1333 aaKnown RBP16.5■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 Antxr1Q9CZ52 562 aa16.49■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 Pnmal2G3X9N3 661 aa16.49■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 Evi5lH3BKQ3 813 aa16.49■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 CenppQ9CZ92 286 aa16.49■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 Ppp1r3fQ9JIG4 799 aa16.49■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 Ecm2Q5FW85 670 aa16.48■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 Igsf3Q6ZQA6 1194 aa16.48■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 PtmsQ9D0J8 101 aaKnown RBP16.48■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 Kif24Q6NWW5 1356 aa16.48■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 Kif18aQ91WD7 886 aa16.48■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 Wdr17E9Q271 1322 aa16.47■□□□□ 0.23
Prpf38b-201ENSMUST00000029480 Kcng1A2BDX4 514 aa16.47■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms