RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Tubb4bP68372 445 aaKnown RBP11.88□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Mcm3P25206 812 aaKnown RBP11.88□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Erlin1Q91X78 346 aa11.88□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Catsper2A2ARP9 588 aa11.88□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Tmx4Q8C0L0 335 aa11.87□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Elp1Q7TT37 1333 aaKnown RBP11.87□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Cpa2Q504N0 417 aa11.87□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Stx6Q9JKK1 255 aa11.87□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Zfp251Q6PCX8 632 aa11.87□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Gnl3lQ6PGG6 577 aaKnown RBP11.87□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Fsd1Q7TPM6 496 aa11.87□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Adck5Q80V03 582 aa11.87□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Noc3lQ8VI84 807 aaKnown RBP11.87□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Larp1Q6ZQ58 1072 aaKnown RBP11.87□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Vps53Q8CCB4 832 aa11.87□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Zhx1P70121 873 aa11.87□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Rufy2Q8R4C2 606 aa11.87□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Sycp1Q62209 993 aa11.87□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Ccdc73Q8CDM4 1066 aa11.87□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Ccar2Q8VDP4 922 aaKnown RBP11.87□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Exoc8Q6PGF7 716 aa11.86□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Ubap1lG3UW59 384 aa11.86□□□□□ -0.51
Ubr1-201ENSMUST00000028728 MyclP10166 368 aa11.86□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Fam107bQ3TGF2 131 aa11.86□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Cdca8Q8BHX3 289 aa11.86□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Soga1E1U8D0 1418 aa11.86□□□□□ -0.51
Ubr1-201ENSMUST00000028728 A2mQ6GQT1 1474 aa11.86□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Plekhm2Q80TQ5 1018 aa11.86□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Mrps27Q8BK72 415 aaKnown RBP11.86□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Erc1Q99MI1 1120 aa11.86□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Gm18336A0A140LIU8 765 aa11.86□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Serpinb6bO08804 377 aa11.86□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Wasf1Q8R5H6 559 aa11.86□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Pof1bQ8K4L4 587 aa11.86□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Stxbp4Q9WV89 557 aa11.86□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Irgm2A0A140LIF8 407 aa11.86□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Kdm4aQ8BW72 1064 aa11.86□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Slc52a2Q9D8F3 450 aa11.85□□□□□ -0.51
Ubr1-201ENSMUST00000028728 EprsQ8CGC7 1512 aaKnown RBP11.85□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Ppp1r18Q8BQ30 594 aa11.85□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Irx4Q9QY61 515 aa11.85□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Duox2A2AQ99 1517 aa11.85□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Ccdc93Q7TQK5 629 aa11.85□□□□□ -0.51
Ubr1-201ENSMUST00000028728 ZwintQ9CQU5 252 aa11.85□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Gm7361D3Z6R1 267 aa11.85□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Usp25P57080 1055 aa11.85□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Mybbp1aQ7TPV4 1344 aaKnown RBP11.84□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Slc13a4Q8BZ82 625 aa11.84□□□□□ -0.51
Ubr1-201ENSMUST00000028728 BbxQ8VBW5 907 aa11.84□□□□□ -0.51
Ubr1-201ENSMUST00000028728 KdrP35918 1367 aa11.84□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Cyp26c1B2RXA7 518 aa11.84□□□□□ -0.51
Ubr1-201ENSMUST00000028728 ImmtQ8CAQ8 757 aaKnown RBP11.84□□□□□ -0.51
Ubr1-201ENSMUST00000028728 TnikP83510 1323 aa11.84□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Vgll3P85442 326 aa11.84□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Arhgap31A6X8Z5 1425 aa11.84□□□□□ -0.51
Ubr1-201ENSMUST00000028728 EvcP57680 1005 aa11.84□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Ankrd44B2RXR6 993 aa11.84□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Ccdc121E9Q6D3 323 aa11.84□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Tubb5P99024 444 aaKnown RBP11.84□□□□□ -0.51
Ubr1-201ENSMUST00000028728 Cfap73J3QPZ5 306 aa11.83□□□□□ -0.52
Ubr1-201ENSMUST00000028728 LifrP42703 1092 aa11.83□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Tmx3Q8BXZ1 456 aa11.83□□□□□ -0.52
Ubr1-201ENSMUST00000028728 RalgapbQ8BQZ4 1484 aa11.83□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Lrrfip1Q3UZ39 729 aaKnown RBP11.83□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Uspl1Q3ULM6 1089 aa11.83□□□□□ -0.52
Ubr1-201ENSMUST00000028728 TxlnaQ6PAM1 554 aaKnown RBP11.83□□□□□ -0.52
Ubr1-201ENSMUST00000028728 IncenpQ9WU62 880 aa11.83□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Agtpbp1Q641K1 1218 aa11.83□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Tmc2Q8R4P4 888 aa11.82□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Cabp2Q9JLK4 216 aa11.82□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Arhgap5P97393 1501 aa11.82□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Trim11Q99PQ2 467 aa11.82□□□□□ -0.52
Ubr1-201ENSMUST00000028728 PalmQ9Z0P4 383 aa11.82□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Pcf11G3X9Z4 1553 aa11.82□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Ccdc162pQ0VG85 912 aa11.82□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Limch1Q3UH68 1057 aa11.82□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Prkar2bP31324 416 aa11.82□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Tspyl3Q3UYP3 334 aa11.82□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Ddx58Q6Q899 926 aa11.82□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Tbc1d8Q9Z1A9 1134 aa11.82□□□□□ -0.52
Ubr1-201ENSMUST00000028728 PaskQ8CEE6 1383 aa11.82□□□□□ -0.52
Ubr1-201ENSMUST00000028728 PtprkP35822 1457 aa11.82□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Luzp1Q8R4U7 1068 aaKnown RBP11.82□□□□□ -0.52
Ubr1-201ENSMUST00000028728 CenppQ9CZ92 286 aa11.82□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Duxf3A0A0N4SV92 674 aa11.82□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Bbof1Q3V079 533 aa11.82□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Mtmr3Q8K296 1196 aa11.82□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Krt84Q99M73 603 aa11.82□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Abcc5Q9R1X5 1436 aa11.81□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Q3UPC7 1272 aa11.81□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Ano10Q8BH79 659 aa11.81□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Pms1Q8K119 917 aa11.81□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Dydc1Q9D9T0 175 aa11.81□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Ccdc150Q8CDI7 1110 aa11.81□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Tmem132aQ922P8 1018 aa11.81□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Brms1Q99N20 246 aa11.81□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Smarcc1P97496 1104 aa11.81□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Paf1Q8K2T8 535 aa11.81□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Chd1lQ9CXF7 900 aa11.81□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Ccdc39Q9D5Y1 937 aa11.81□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms