RNA–Protein interactions for RNA: ENSMUST00000022356.11

Usp54-201, Transcript of Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp54, Length 6,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54-201ENSMUST00000022356 Hmox1P14901 289 aa9.56□□□□□ -0.88
Usp54-201ENSMUST00000022356 Arhgef1Q61210 920 aaKnown RBP9.56□□□□□ -0.88
Usp54-201ENSMUST00000022356 Ift74Q8BKE9 600 aa9.56□□□□□ -0.88
Usp54-201ENSMUST00000022356 Pprc1Q6NZN1 1644 aa9.56□□□□□ -0.88
Usp54-201ENSMUST00000022356 Ints3Q7TPD0 1041 aaKnown RBP9.56□□□□□ -0.88
Usp54-201ENSMUST00000022356 Tnip1Q9WUU8 647 aa9.56□□□□□ -0.88
Usp54-201ENSMUST00000022356 Zscan20B2KFW1 1030 aa9.56□□□□□ -0.88
Usp54-201ENSMUST00000022356 Traf1P39428 409 aa9.56□□□□□ -0.88
Usp54-201ENSMUST00000022356 Gpr162Q3UN16 588 aa9.56□□□□□ -0.88
Usp54-201ENSMUST00000022356 Plekhg5Q66T02 1073 aa9.56□□□□□ -0.88
Usp54-201ENSMUST00000022356 Nphp1Q9QY53 687 aa9.56□□□□□ -0.88
Usp54-201ENSMUST00000022356 Polr3aB2RXC6 1390 aa9.56□□□□□ -0.88
Usp54-201ENSMUST00000022356 Tnnt2P50752 301 aa9.56□□□□□ -0.88
Usp54-201ENSMUST00000022356 Xrcc4Q924T3 326 aa9.56□□□□□ -0.88
Usp54-201ENSMUST00000022356 Tmem87bQ8BKU8 555 aa9.55□□□□□ -0.88
Usp54-201ENSMUST00000022356 Slc14a2Q8R4T9 930 aa9.55□□□□□ -0.88
Usp54-201ENSMUST00000022356 Gcc1Q9D4H2 778 aa9.55□□□□□ -0.88
Usp54-201ENSMUST00000022356 Znf518aB2RRF6 1478 aaKnown RBP9.55□□□□□ -0.88
Usp54-201ENSMUST00000022356 Slc27a3O88561 667 aa9.55□□□□□ -0.88
Usp54-201ENSMUST00000022356 Nphp3Q7TNH6 1325 aa9.55□□□□□ -0.88
Usp54-201ENSMUST00000022356 Stim1P70302 685 aa9.55□□□□□ -0.88
Usp54-201ENSMUST00000022356 Ncf1Q09014 390 aa9.55□□□□□ -0.88
Usp54-201ENSMUST00000022356 Fermt2Q8CIB5 680 aa9.55□□□□□ -0.88
Usp54-201ENSMUST00000022356 Gli2Q0VGT2 1544 aa9.55□□□□□ -0.88
Usp54-201ENSMUST00000022356 HmmrQ00547 794 aaKnown RBP9.55□□□□□ -0.88
Usp54-201ENSMUST00000022356 Stac3Q8BZ71 360 aa9.55□□□□□ -0.88
Usp54-201ENSMUST00000022356 Naip5Q9R016 1403 aa9.55□□□□□ -0.88
Usp54-201ENSMUST00000022356 Olfr247E9PVJ7 320 aa9.54□□□□□ -0.88
Usp54-201ENSMUST00000022356 Olfr819K7N727 320 aa9.54□□□□□ -0.88
Usp54-201ENSMUST00000022356 Sf3a1Q8K4Z5 791 aaKnown RBP9.54□□□□□ -0.88
Usp54-201ENSMUST00000022356 Lmbr1Q9JIT0 490 aa9.54□□□□□ -0.88
Usp54-201ENSMUST00000022356 Cabp2Q9JLK4 216 aa9.54□□□□□ -0.88
Usp54-201ENSMUST00000022356 Luc7lQ9CYI4 371 aaKnown RBP9.54□□□□□ -0.88
Usp54-201ENSMUST00000022356 Sh3bgrQ9WUZ7 214 aa9.54□□□□□ -0.88
Usp54-201ENSMUST00000022356 Anp32eP97822 260 aaKnown RBP9.54□□□□□ -0.88
Usp54-201ENSMUST00000022356 Rsph3aQ3UFY4 516 aa9.54□□□□□ -0.88
Usp54-201ENSMUST00000022356 B4galnt3Q6L8S8 986 aa9.54□□□□□ -0.88
Usp54-201ENSMUST00000022356 AdpgkQ8VDL4 496 aa9.54□□□□□ -0.88
Usp54-201ENSMUST00000022356 Sin3aQ60520 1274 aaKnown RBP9.53□□□□□ -0.88
Usp54-201ENSMUST00000022356 SfswapQ3USH5 945 aaKnown RBP9.53□□□□□ -0.88
Usp54-201ENSMUST00000022356 Commd10Q8JZY2 202 aa9.53□□□□□ -0.88
Usp54-201ENSMUST00000022356 Smc3Q9CW03 1217 aaKnown RBP9.53□□□□□ -0.88
Usp54-201ENSMUST00000022356 Traf3ip1Q149C2 625 aa9.53□□□□□ -0.88
Usp54-201ENSMUST00000022356 ParvgQ9ERD8 331 aa9.53□□□□□ -0.88
Usp54-201ENSMUST00000022356 Plekhh1Q80TI1 1356 aa9.53□□□□□ -0.88
Usp54-201ENSMUST00000022356 Cct4P80315 539 aaKnown RBP9.53□□□□□ -0.88
Usp54-201ENSMUST00000022356 HomezQ80W88 542 aa9.53□□□□□ -0.88
Usp54-201ENSMUST00000022356 Cwc25Q9DBF7 416 aa9.53□□□□□ -0.88
Usp54-201ENSMUST00000022356 Gnat3Q3V3I2 354 aa9.53□□□□□ -0.88
Usp54-201ENSMUST00000022356 Senp3Q9EP97 568 aaKnown RBP9.53□□□□□ -0.88
Usp54-201ENSMUST00000022356 Ptcd1Q8C2E4 695 aaKnown RBP9.52□□□□□ -0.88
Usp54-201ENSMUST00000022356 Ppp6r1Q7TSI3 856 aa9.52□□□□□ -0.89
Usp54-201ENSMUST00000022356 Cep89Q9CZX2 791 aa9.52□□□□□ -0.89
Usp54-201ENSMUST00000022356 Galntl5Q9D4M9 431 aa9.52□□□□□ -0.89
Usp54-201ENSMUST00000022356 Stk32bQ9JJX8 414 aa9.52□□□□□ -0.89
Usp54-201ENSMUST00000022356 IncenpQ9WU62 880 aa9.52□□□□□ -0.89
Usp54-201ENSMUST00000022356 Nup160Q9Z0W3 1402 aaKnown RBP9.52□□□□□ -0.89
Usp54-201ENSMUST00000022356 AnlnQ8K298 1121 aaKnown RBP9.52□□□□□ -0.89
Usp54-201ENSMUST00000022356 Xpo5Q924C1 1204 aaKnown RBP9.52□□□□□ -0.89
Usp54-201ENSMUST00000022356 Gm1043A0A140LJC2 1431 aa9.52□□□□□ -0.89
Usp54-201ENSMUST00000022356 Tom1l2Q5SRX1 507 aa9.52□□□□□ -0.89
Usp54-201ENSMUST00000022356 Ubxn4Q8VCH8 506 aa9.52□□□□□ -0.89
Usp54-201ENSMUST00000022356 Abcc5Q9R1X5 1436 aa9.52□□□□□ -0.89
Usp54-201ENSMUST00000022356 Erich4Q3UNU4 136 aa9.52□□□□□ -0.89
Usp54-201ENSMUST00000022356 Shroom2A2ALU4 1481 aa9.51□□□□□ -0.89
Usp54-201ENSMUST00000022356 Tnni2P13412 182 aa9.51□□□□□ -0.89
Usp54-201ENSMUST00000022356 Exoc8Q6PGF7 716 aa9.51□□□□□ -0.89
Usp54-201ENSMUST00000022356 MsnP26041 577 aaKnown RBP9.51□□□□□ -0.89
Usp54-201ENSMUST00000022356 Dnajc5P60904 198 aa9.51□□□□□ -0.89
Usp54-201ENSMUST00000022356 Dusp27Q148W8 1138 aa9.51□□□□□ -0.89
Usp54-201ENSMUST00000022356 Samm50Q8BGH2 469 aa9.51□□□□□ -0.89
Usp54-201ENSMUST00000022356 Bag4Q8CI61 457 aa9.51□□□□□ -0.89
Usp54-201ENSMUST00000022356 BccipQ9CWI3 316 aa9.51□□□□□ -0.89
Usp54-201ENSMUST00000022356 Fermt1P59113 677 aa9.51□□□□□ -0.89
Usp54-201ENSMUST00000022356 Mpp4Q6P7F1 635 aa9.51□□□□□ -0.89
Usp54-201ENSMUST00000022356 Uggt2E9Q4X2 1504 aa9.51□□□□□ -0.89
Usp54-201ENSMUST00000022356 Arhgef12Q8R4H2 1543 aaKnown RBP9.51□□□□□ -0.89
Usp54-201ENSMUST00000022356 Larp1bA0A0A6YXJ7 370 aaKnown RBP9.51□□□□□ -0.89
Usp54-201ENSMUST00000022356 Ppp2r1aQ76MZ3 589 aa9.51□□□□□ -0.89
Usp54-201ENSMUST00000022356 GorabQ8BRM2 368 aa9.51□□□□□ -0.89
Usp54-201ENSMUST00000022356 Hook3Q8BUK6 718 aa9.51□□□□□ -0.89
Usp54-201ENSMUST00000022356 Rai14Q9EP71 979 aaKnown RBP9.51□□□□□ -0.89
Usp54-201ENSMUST00000022356 Hmgn5Q9JL35 406 aa9.51□□□□□ -0.89
Usp54-201ENSMUST00000022356 Col17a1Q07563 1470 aa9.5□□□□□ -0.89
Usp54-201ENSMUST00000022356 Dnai1Q8C0M8 701 aa9.5□□□□□ -0.89
Usp54-201ENSMUST00000022356 Sde2Q8K1J5 448 aaKnown RBP9.5□□□□□ -0.89
Usp54-201ENSMUST00000022356 SetQ9EQU5 289 aaKnown RBP9.5□□□□□ -0.89
Usp54-201ENSMUST00000022356 PalmQ9Z0P4 383 aa9.5□□□□□ -0.89
Usp54-201ENSMUST00000022356 Casq1O09165 405 aa9.5□□□□□ -0.89
Usp54-201ENSMUST00000022356 Igf2bp2Q5SF07 592 aaKnown RBP9.5□□□□□ -0.89
Usp54-201ENSMUST00000022356 Ccdc30Q8BVF4 654 aa9.5□□□□□ -0.89
Usp54-201ENSMUST00000022356 NinlQ6ZQ12 1394 aa9.5□□□□□ -0.89
Usp54-201ENSMUST00000022356 Pcf11G3X9Z4 1553 aa9.5□□□□□ -0.89
Usp54-201ENSMUST00000022356 WizO88286 1684 aaKnown RBP9.5□□□□□ -0.89
Usp54-201ENSMUST00000022356 Glt1d1A4FUP9 346 aa9.5□□□□□ -0.89
Usp54-201ENSMUST00000022356 Kif3cO35066 796 aa9.5□□□□□ -0.89
Usp54-201ENSMUST00000022356 Nip7Q9CXK8 180 aaKnown RBP9.5□□□□□ -0.89
Usp54-201ENSMUST00000022356 Pdcd6ipQ9WU78 869 aaKnown RBP9.5□□□□□ -0.89
Usp54-201ENSMUST00000022356 Plekhg2Q6KAU7 1340 aa9.5□□□□□ -0.89
Usp54-201ENSMUST00000022356 BC005561E9Q5E2 1589 aa9.5□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 7.6 ms