RNA–Protein interactions for RNA: ENSMUST00000004949.7

Traf6-201, Transcript of TNF receptor-associated factor 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf6, Length 6,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6-201ENSMUST00000004949 Bcl11aQ9QYE3 773 aa15.75■□□□□ 0.11
Traf6-201ENSMUST00000004949 Fam193aQ8CGI1 1231 aaKnown RBP15.74■□□□□ 0.11
Traf6-201ENSMUST00000004949 Znf518aB2RRF6 1478 aaKnown RBP15.74■□□□□ 0.11
Traf6-201ENSMUST00000004949 Map3k2Q61083 619 aa15.74■□□□□ 0.11
Traf6-201ENSMUST00000004949 A0A0U1RNP2 1173 aa15.74■□□□□ 0.11
Traf6-201ENSMUST00000004949 Slf2Q6P9P0 1278 aa15.74■□□□□ 0.11
Traf6-201ENSMUST00000004949 Top1mtQ8R4U6 593 aa15.74■□□□□ 0.11
Traf6-201ENSMUST00000004949 Ccdc96Q9CR92 584 aa15.74■□□□□ 0.11
Traf6-201ENSMUST00000004949 TnnQ80Z71 1560 aa15.73■□□□□ 0.11
Traf6-201ENSMUST00000004949 1700010I14RikQ7TPG0 532 aa15.73■□□□□ 0.11
Traf6-201ENSMUST00000004949 Sos1Q62245 1319 aa15.73■□□□□ 0.11
Traf6-201ENSMUST00000004949 Becn1O88597 448 aa15.73■□□□□ 0.11
Traf6-201ENSMUST00000004949 Wdhd1P59328 1117 aa15.73■□□□□ 0.11
Traf6-201ENSMUST00000004949 Cdca7Q9D0M2 382 aa15.73■□□□□ 0.11
Traf6-201ENSMUST00000004949 Tnni2P13412 182 aa15.73■□□□□ 0.11
Traf6-201ENSMUST00000004949 Fsd1Q7TPM6 496 aa15.73■□□□□ 0.11
Traf6-201ENSMUST00000004949 Igflr1Q3U4N7 345 aa15.72■□□□□ 0.11
Traf6-201ENSMUST00000004949 Dnajc10Q9DC23 793 aa15.72■□□□□ 0.11
Traf6-201ENSMUST00000004949 CastP51125 788 aa15.72■□□□□ 0.11
Traf6-201ENSMUST00000004949 Tbc1d7Q9D0K0 293 aa15.72■□□□□ 0.11
Traf6-201ENSMUST00000004949 RalgapbQ8BQZ4 1484 aa15.72■□□□□ 0.11
Traf6-201ENSMUST00000004949 Irf9Q61179 399 aa15.72■□□□□ 0.11
Traf6-201ENSMUST00000004949 Ppip5k1A2ARP1 1436 aa15.72■□□□□ 0.11
Traf6-201ENSMUST00000004949 Rrp12Q6P5B0 1295 aaKnown RBP15.71■□□□□ 0.11
Traf6-201ENSMUST00000004949 Arhgef40Q3UPH7 1517 aa15.71■□□□□ 0.11
Traf6-201ENSMUST00000004949 Adcy10Q8C0T9 1614 aa15.71■□□□□ 0.11
Traf6-201ENSMUST00000004949 A0A1L1SQF0 893 aa15.71■□□□□ 0.1
Traf6-201ENSMUST00000004949 Rhot2Q8JZN7 620 aa15.71■□□□□ 0.1
Traf6-201ENSMUST00000004949 Nup133Q8R0G9 1155 aa15.71■□□□□ 0.1
Traf6-201ENSMUST00000004949 Myd88P22366 296 aa15.7■□□□□ 0.1
Traf6-201ENSMUST00000004949 Paf1Q8K2T8 535 aa15.7■□□□□ 0.1
Traf6-201ENSMUST00000004949 Ifit1bl2Q3U687 466 aa15.7■□□□□ 0.1
Traf6-201ENSMUST00000004949 Nip7Q9CXK8 180 aaKnown RBP15.7■□□□□ 0.1
Traf6-201ENSMUST00000004949 Dennd4bQ3U1Y4 1499 aa15.7■□□□□ 0.1
Traf6-201ENSMUST00000004949 Cnnm3Q32NY4 713 aa15.7■□□□□ 0.1
Traf6-201ENSMUST00000004949 Znf428Q8C1M2 176 aa15.69■□□□□ 0.1
Traf6-201ENSMUST00000004949 Fsd2Q8BZ52 692 aa15.69■□□□□ 0.1
Traf6-201ENSMUST00000004949 Ccnl1Q52KE7 532 aaKnown RBP15.69■□□□□ 0.1
Traf6-201ENSMUST00000004949 Irgm2A0A140LIF8 407 aa15.69■□□□□ 0.1
Traf6-201ENSMUST00000004949 Stk38Q91VJ4 465 aa15.69■□□□□ 0.1
Traf6-201ENSMUST00000004949 Bcar3Q9QZK2 820 aa15.69■□□□□ 0.1
Traf6-201ENSMUST00000004949 Pms1Q8K119 917 aa15.69■□□□□ 0.1
Traf6-201ENSMUST00000004949 Hap1O35668 628 aa15.68■□□□□ 0.1
Traf6-201ENSMUST00000004949 Zap70P43404 618 aa15.68■□□□□ 0.1
Traf6-201ENSMUST00000004949 Q4VA45 678 aa15.68■□□□□ 0.1
Traf6-201ENSMUST00000004949 Il1rapl2Q9ERS6 686 aa15.68■□□□□ 0.1
Traf6-201ENSMUST00000004949 Cpa2Q504N0 417 aa15.67■□□□□ 0.1
Traf6-201ENSMUST00000004949 Cyp7a1Q64505 503 aa15.67■□□□□ 0.1
Traf6-201ENSMUST00000004949 Rai14Q9EP71 979 aaKnown RBP15.67■□□□□ 0.1
Traf6-201ENSMUST00000004949 Abcc2Q8VI47 1543 aa15.67■□□□□ 0.1
Traf6-201ENSMUST00000004949 Eif4a2P10630 407 aa15.67■□□□□ 0.1
Traf6-201ENSMUST00000004949 AidaQ8C4Q6 305 aa15.67■□□□□ 0.1
Traf6-201ENSMUST00000004949 Dusp9Q7TNL7 452 aa15.67■□□□□ 0.1
Traf6-201ENSMUST00000004949 NaspQ99MD9 773 aaKnown RBP15.67■□□□□ 0.1
Traf6-201ENSMUST00000004949 Magi3Q9EQJ9 1476 aa15.67■□□□□ 0.1
Traf6-201ENSMUST00000004949 Ipo7Q9EPL8 1038 aaKnown RBP15.66■□□□□ 0.1
Traf6-201ENSMUST00000004949 Arhgef12Q8R4H2 1543 aaKnown RBP15.66■□□□□ 0.1
Traf6-201ENSMUST00000004949 Ptch1Q61115 1434 aa15.66■□□□□ 0.1
Traf6-201ENSMUST00000004949 Ddx58Q6Q899 926 aa15.66■□□□□ 0.1
Traf6-201ENSMUST00000004949 Ppip5k2Q6ZQB6 1129 aa15.66■□□□□ 0.1
Traf6-201ENSMUST00000004949 Efcab2Q9CQ46 164 aa15.66■□□□□ 0.1
Traf6-201ENSMUST00000004949 Fam83gQ5SWY7 812 aa15.66■□□□□ 0.1
Traf6-201ENSMUST00000004949 Bag3Q9JLV1 577 aaKnown RBP15.66■□□□□ 0.1
Traf6-201ENSMUST00000004949 Prrc2bQ7TPM1 1486 aaKnown RBP15.66■□□□□ 0.1
Traf6-201ENSMUST00000004949 Cct4P80315 539 aaKnown RBP15.66■□□□□ 0.1
Traf6-201ENSMUST00000004949 Smarcc1P97496 1104 aa15.66■□□□□ 0.1
Traf6-201ENSMUST00000004949 Zkscan1Q8BGS3 561 aaKnown RBP15.66■□□□□ 0.1
Traf6-201ENSMUST00000004949 Ddrgk1Q80WW9 315 aa15.65■□□□□ 0.1
Traf6-201ENSMUST00000004949 Smc2Q8CG48 1191 aaKnown RBP15.65■□□□□ 0.1
Traf6-201ENSMUST00000004949 Pof1bQ8K4L4 587 aa15.65■□□□□ 0.1
Traf6-201ENSMUST00000004949 Ppp4r3bQ922R5 820 aa15.65■□□□□ 0.1
Traf6-201ENSMUST00000004949 Zmym3Q9JLM4 1370 aa15.65■□□□□ 0.1
Traf6-201ENSMUST00000004949 Gli2Q0VGT2 1544 aa15.65■□□□□ 0.1
Traf6-201ENSMUST00000004949 Kiaa0753Q6A000 959 aa15.65■□□□□ 0.1
Traf6-201ENSMUST00000004949 Ankrd13dQ6PD24 605 aa15.65■□□□□ 0.1
Traf6-201ENSMUST00000004949 Dhx8A2A4P0 1244 aaKnown RBP15.64■□□□□ 0.1
Traf6-201ENSMUST00000004949 Lrrcc1Q69ZB0 1026 aa15.64■□□□□ 0.1
Traf6-201ENSMUST00000004949 Fam13aQ8BGI4 693 aa15.64■□□□□ 0.1
Traf6-201ENSMUST00000004949 Ccdc178Q8CDV0 866 aa15.64■□□□□ 0.09
Traf6-201ENSMUST00000004949 Krt84Q99M73 603 aa15.64■□□□□ 0.09
Traf6-201ENSMUST00000004949 Prpf4bQ61136 1007 aaKnown RBP15.64■□□□□ 0.09
Traf6-201ENSMUST00000004949 Erc1Q99MI1 1120 aa15.64■□□□□ 0.09
Traf6-201ENSMUST00000004949 Ush1cQ9ES64 910 aa15.64■□□□□ 0.09
Traf6-201ENSMUST00000004949 Kif3aP28741 701 aa15.64■□□□□ 0.09
Traf6-201ENSMUST00000004949 Ubxn4Q8VCH8 506 aa15.64■□□□□ 0.09
Traf6-201ENSMUST00000004949 Galntl5Q9D4M9 431 aa15.64■□□□□ 0.09
Traf6-201ENSMUST00000004949 Plagl1Q9JLQ4 704 aa15.63■□□□□ 0.09
Traf6-201ENSMUST00000004949 Znf697Q569E7 569 aa15.63■□□□□ 0.09
Traf6-201ENSMUST00000004949 NsmfQ99NF2 532 aa15.63■□□□□ 0.09
Traf6-201ENSMUST00000004949 Ppfia3P60469 1194 aa15.62■□□□□ 0.09
Traf6-201ENSMUST00000004949 Pde4dQ01063 747 aa15.62■□□□□ 0.09
Traf6-201ENSMUST00000004949 Ddx17Q501J6 650 aaKnown RBP15.62■□□□□ 0.09
Traf6-201ENSMUST00000004949 Rbm26Q6NZN0 1012 aaKnown RBP15.62■□□□□ 0.09
Traf6-201ENSMUST00000004949 Golim4Q8BXA1 655 aa15.62■□□□□ 0.09
Traf6-201ENSMUST00000004949 Nup160Q9Z0W3 1402 aaKnown RBP15.62■□□□□ 0.09
Traf6-201ENSMUST00000004949 Jarid2Q62315 1234 aa15.62■□□□□ 0.09
Traf6-201ENSMUST00000004949 Uspl1Q3ULM6 1089 aa15.62■□□□□ 0.09
Traf6-201ENSMUST00000004949 Mum1Q6DID5 682 aa15.62■□□□□ 0.09
Traf6-201ENSMUST00000004949 Riok1Q922Q2 567 aa15.62■□□□□ 0.09
Traf6-201ENSMUST00000004949 Zscan20B2KFW1 1030 aa15.61■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 46.6 ms