RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 NMBRP28336 390 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 PHBP35232 272 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 CTSKP43235 329 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 ARRB1P49407 418 aaPredicted RBP9.35□□□□□ -0.91
PHGDH-228ENST00000641847 GPX6P59796 221 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 TMPRSS15P98073 1019 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 PDE1BQ01064 536 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 VAC14Q08AM6 782 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 CCDC15Q0P6D6 951 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 SFSWAPQ12872 951 aaKnown RBP9.35□□□□□ -0.91
PHGDH-228ENST00000641847 ARHGEF7Q14155 803 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 PTPRCAPQ14761 206 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 UAP1Q16222 522 aaPredicted RBP9.35□□□□□ -0.91
PHGDH-228ENST00000641847 CDKN3Q16667 212 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.35□□□□□ -0.91
PHGDH-228ENST00000641847 NLRP9Q7RTR0 991 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 PALM2Q8IXS6 379 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 MREGQ8N565 214 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.35□□□□□ -0.91
PHGDH-228ENST00000641847 OR4K2Q8NGD2 314 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 OR13C4Q8NGS5 318 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 GSDMBQ8TAX9 411 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 CXorf40AQ8TE69 158 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 KCNE4Q8WWG9 221 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 PEX13Q92968 403 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 FAM131CQ96AQ9 280 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 MFSD3Q96ES6 412 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 ZNF778Q96MU6 729 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 WRAP53Q9BUR4 548 aaKnown RBP9.35□□□□□ -0.91
PHGDH-228ENST00000641847 SEMA4CQ9C0C4 833 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 EPB41L4BQ9H329 900 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 LRRC4CQ9HCJ2 640 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 ARFGAP3Q9NP61 516 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 TREX1Q9NSU2 369 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 RIMKLBQ9ULI2 386 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 FZD4Q9ULV1 537 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 SCML1Q9UN30 329 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 NCKAP1Q9Y2A7 1128 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.35□□□□□ -0.91
PHGDH-228ENST00000641847 PKP3Q9Y446 797 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 LRRK2Q5S007 2527 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 ZCWPW2A0A1B0GU75 182 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 TCRBV9S1A1TA0A576 114 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 STX7O15400 261 aaKnown RBP9.34□□□□□ -0.91
PHGDH-228ENST00000641847 KLK10O43240 276 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 AP1G1O43747 822 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 FSBPO95073 299 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 SEMA4FO95754 770 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 ABHD2P08910 425 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 GSTA2P09210 222 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 PAMP19021 973 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 SSTR1P30872 391 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 STX2P32856 288 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 HMGCLP35914 325 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 HSD17B3P37058 310 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 ACADVLP49748 655 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 ARSDP51689 593 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 STC1P52823 247 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 ADPRHP54922 357 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 TAS2R38P59533 333 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 E2F1Q01094 437 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 DNAJC3Q13217 504 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 LONRF1Q17RB8 773 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 TMEM52BQ4KMG9 183 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 COLEC12Q5KU26 742 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 ALS2CLQ60I27 953 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 KIAA0930Q6ICG6 404 aaPredicted RBP9.34□□□□□ -0.91
PHGDH-228ENST00000641847 ESRP1Q6NXG1 681 aaKnown RBP9.34□□□□□ -0.91
PHGDH-228ENST00000641847 ATG14Q6ZNE5 492 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 MICALCLQ6ZW33 695 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 USP30Q70CQ3 517 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 TMEM135Q86UB9 458 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 EID2Q8N6I1 236 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 OR13J1Q8NGT2 312 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 OR14C36Q8NHC7 312 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 UHMK1Q8TAS1 419 aaKnown RBP9.34□□□□□ -0.91
PHGDH-228ENST00000641847 STYXQ8WUJ0 223 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 ANKRD7Q92527 254 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 EID2BQ96D98 161 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 CERS2Q96G23 380 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 ELF4Q99607 663 aaPredicted RBP9.34□□□□□ -0.91
PHGDH-228ENST00000641847 BTBD1Q9H0C5 482 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 BPIFA1Q9NP55 256 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 NLE1Q9NVX2 485 aaPredicted RBP9.34□□□□□ -0.91
PHGDH-228ENST00000641847 PKD2L2Q9NZM6 624 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 IL1RAPL1Q9NZN1 696 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 FKBPLQ9UIM3 349 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 PLXNA2O75051 1894 aa9.34□□□□□ -0.91
PHGDH-228ENST00000641847 A0A087WUV0 522 aaPredicted RBP9.33□□□□□ -0.92
PHGDH-228ENST00000641847 PSMD11O00231 422 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 DYNC1I1O14576 645 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 VILLO15195 856 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 TSPAN6O43657 245 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 PLRG1O43660 514 aaKnown RBP9.33□□□□□ -0.92
PHGDH-228ENST00000641847 PCDH8O95206 1070 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 BPIP17213 487 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 ARNTP27540 789 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 SPAM1P38567 509 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 HADHAP40939 763 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 ETV3P41162 512 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms