RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 SNX25Q9H3E2 840 aa5.88□□□□□ -1.47
CASC19-260ENST00000641828 ATP13A3Q9H7F0 1226 aa5.88□□□□□ -1.47
CASC19-260ENST00000641828 C12orf10Q9HB07 376 aa5.88□□□□□ -1.47
CASC19-260ENST00000641828 FBXO8Q9NRD0 319 aa5.88□□□□□ -1.47
CASC19-260ENST00000641828 C20orf96Q9NUD7 363 aaPredicted RBP5.88□□□□□ -1.47
CASC19-260ENST00000641828 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.88□□□□□ -1.47
CASC19-260ENST00000641828 MTMR4Q9NYA4 1195 aa5.88□□□□□ -1.47
CASC19-260ENST00000641828 KLQ9UEF7 1012 aa5.88□□□□□ -1.47
CASC19-260ENST00000641828 ENPP5Q9UJA9 477 aa5.88□□□□□ -1.47
CASC19-260ENST00000641828 AGO2Q9UKV8 859 aaKnown RBP5.88□□□□□ -1.47
CASC19-260ENST00000641828 EMCNQ9ULC0 261 aa5.88□□□□□ -1.47
CASC19-260ENST00000641828 SAC3D1A6NKF1 404 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 FAM86B1E9PN63 330 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 K7ENM7 598 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 DLGAP1O14490 977 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 MEIS2O14770 477 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 UGT2B11O75310 529 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 HSPA4LO95757 839 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 ESR1P03372 595 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 KRT8P05787 483 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 KRT7P08729 469 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 FAM86B2P0C5J1 330 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 CDH1P12830 882 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 TCN1P20061 433 aaPredicted RBP5.87□□□□□ -1.47
CASC19-260ENST00000641828 CCND2P30279 289 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 GRIA3P42263 894 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 NR4A2P43354 598 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 NAMPTP43490 491 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 SERPINB10P48595 397 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 CLK3P49761 638 aaKnown RBP5.87□□□□□ -1.47
CASC19-260ENST00000641828 ATXN3P54252 364 aaPredicted RBP5.87□□□□□ -1.47
CASC19-260ENST00000641828 COPZ1P61923 177 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 RPL7AP62424 266 aaKnown RBP5.87□□□□□ -1.47
CASC19-260ENST00000641828 YWHAZP63104 245 aaKnown RBP5.87□□□□□ -1.47
CASC19-260ENST00000641828 NOMO3P69849 1222 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 ECT2LQ008S8 904 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 IFITM3Q01628 133 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 ENPEPQ07075 957 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 ILF2Q12905 390 aaKnown RBP5.87□□□□□ -1.47
CASC19-260ENST00000641828 SLC10A2Q12908 348 aaPredicted RBP5.87□□□□□ -1.47
CASC19-260ENST00000641828 BFSP2Q13515 415 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 SLC12A1Q13621 1099 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 GALEQ14376 348 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 DLG2Q15700 870 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 TAZQ16635 292 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 C15orf59Q2T9L4 293 aaPredicted RBP5.87□□□□□ -1.47
CASC19-260ENST00000641828 CDONQ4KMG0 1287 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 CEP78Q5JTW2 689 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 SLC9A4Q6AI14 798 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 FAM109BQ6ICB4 259 aaPredicted RBP5.87□□□□□ -1.47
CASC19-260ENST00000641828 TATDN1Q6P1N9 297 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 B3GNT9Q6UX72 402 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 ATG14Q6ZNE5 492 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 SLC51BQ86UW2 128 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 SLC22A16Q86VW1 577 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 UNC5BQ8IZJ1 945 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 ABRAQ8N0Z2 381 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 CLIP4Q8N3C7 705 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 SFRP1Q8N474 314 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 NIPA2Q8N8Q9 360 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 ASCC1Q8N9N2 400 aaKnown RBP5.87□□□□□ -1.47
CASC19-260ENST00000641828 FAM71DQ8N9W8 422 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 SIMC1Q8NDZ2 872 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 OSCP1Q8WVF1 389 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 SNX19Q92543 992 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 TP53INP1Q96A56 240 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 FAF2Q96CS3 445 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 BTN2A3PQ96KV6 586 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 SPATA17Q96L03 361 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 CDK5RAP1Q96SZ6 601 aaKnown RBP5.87□□□□□ -1.47
CASC19-260ENST00000641828 P2RX7Q99572 595 aaKnown RBP5.87□□□□□ -1.47
CASC19-260ENST00000641828 BCL7BQ9BQE9 202 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 CLSTN3Q9BQT9 956 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 CBWD1Q9BRT8 395 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 CLPBQ9H078 707 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 ILKAPQ9H0C8 392 aaPredicted RBP5.87□□□□□ -1.47
CASC19-260ENST00000641828 UPF3AQ9H1J1 476 aaKnown RBP5.87□□□□□ -1.47
CASC19-260ENST00000641828 POPDC2Q9HBU9 364 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 ZBTB26Q9HCK0 441 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 SMYD2Q9NRG4 433 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 ADA2Q9NZK5 511 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 SAE1Q9UBE0 346 aaPredicted RBP5.87□□□□□ -1.47
CASC19-260ENST00000641828 MTRRQ9UBK8 725 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 ZNF229Q9UJW7 825 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 DSEQ9UL01 958 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 FAM50BQ9Y247 325 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 ZNF281Q9Y2X9 895 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 PCDHA1Q9Y5I3 950 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 CNTNAP2Q9UHC6 1331 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 CACNA1AO00555 2505 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 RNF103-CHMP3A0A140T963 221 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 HEATR9A2RTY3 570 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 SLC15A5A6NIM6 579 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 ZSCAN5BA6NJL1 495 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 A6NL46 340 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 C3orf70A6NLC5 250 aaPredicted RBP5.87□□□□□ -1.47
CASC19-260ENST00000641828 B8ZZF3 427 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 F8VP50 259 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 SLCO1B7G3V0H7 640 aa5.87□□□□□ -1.47
CASC19-260ENST00000641828 STX16-NPEPL1H3BU86 382 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms