RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, human

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-222	ENST00000640072	CCT3	P49368	545 aa	Known RBP	6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	RAC3	P60763	192 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	VAMP2	P63027	116 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	GPLD1	P80108	840 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	PIGH	Q14442	188 aa	Predicted RBP	6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	LRRC24	Q50LG9	513 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	TRAT1	Q6PIZ9	186 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	SNX20	Q7Z614	316 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	CLYBL	Q8N0X4	340 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	BEND7	Q8N7W2	519 aa	Predicted RBP	6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	ZBTB34	Q8NCN2	500 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	FAM174A	Q8TBP5	190 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	DNAJA4	Q8WW22	397 aa	Predicted RBP	6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	SNAPC3	Q92966	411 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	DCPS	Q96C86	337 aa	Known RBP	6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	TXNDC15	Q96J42	360 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	RAD9A	Q99638	391 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	ACO2	Q99798	780 aa	Known RBP	6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	KCNH6	Q9H252	994 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	SNX15	Q9NRS6	342 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	FBXO28	Q9NVF7	368 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	RIC8B	Q9NVN3	520 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	SPATA6	Q9NWH7	488 aa	Predicted RBP	6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	CLEC5A	Q9NY25	188 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	CACNG4	Q9UBN1	327 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	KL	Q9UEF7	1012 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	RWDD2A	Q9UIY3	292 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	ADAMTS6	Q9UKP5	1117 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	GPR55	Q9Y2T6	319 aa	Predicted RBP	6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	PPIL1	Q9Y3C6	166 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	TESMIN	Q9Y4I5	508 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	TRAF6	Q9Y4K3	522 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	ARHGEF40	Q8TER5	1519 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	ABCB11	O95342	1321 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	GNG14	A0A1W2PPG7	69 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	OR5K3	A6NET4	321 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	C22orf46	C9J442	243 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	FCHO1	O14526	889 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	CDH16	O75309	829 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	ATE1	O95260	518 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	HNRNPL	P14866	589 aa	Known RBP eCLIP	6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	PTN	P21246	168 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	KCNA5	P22460	613 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	TIE1	P35590	1138 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	FLI1	Q01543	452 aa	Predicted RBP	6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	APOF	Q13790	326 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	SYT16	Q17RD7	645 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	HFE	Q30201	348 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	C2orf76	Q3KRA6	126 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	BEX5	Q5H9J7	111 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	MPP7	Q5T2T1	576 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	FAM160B1	Q5W0V3	765 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	CES4A	Q5XG92	561 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	KRT39	Q6A163	491 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	MFSD5	Q6N075	450 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	MPRIP	Q6WCQ1	1025 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	PLEKHG7	Q6ZR37	379 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	NECAB2	Q7Z6G3	386 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	SEPT12	Q8IYM1	358 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	PHTF2	Q8N3S3	785 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	RBM15B	Q8NDT2	890 aa	Known RBP	6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	SPATA20	Q8TB22	786 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	S100Z	Q8WXG8	99 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	FBXW5	Q969U6	566 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	ADIPOR1	Q96A54	375 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	DSCC1	Q9BVC3	393 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	MID1IP1	Q9NPA3	183 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	IFT46	Q9NQC8	304 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	POLE4	Q9NR33	117 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	GJB4	Q9NTQ9	266 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	STOML2	Q9UJZ1	356 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	NOCT	Q9UK39	431 aa	Known RBP	6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	USP18	Q9UMW8	372 aa		6.12	□□□□□ -1.43
NECAP1-222	ENST00000640072	TRAV34	A0A0B4J273	112 aa		6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072		A0A1B0GV90	55 aa		6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	FAM187A	A6NFU0	413 aa		6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	AIM2	O14862	343 aa		6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	SGCE	O43556	437 aa		6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	SNAP91	O60641	907 aa		6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	CPNE3	O75131	537 aa	Known RBP	6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	MMP2	P08253	660 aa		6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	ITGA4	P13612	1032 aa		6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	HOXB3	P14651	431 aa	Predicted RBP	6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	IRS1	P35568	1242 aa		6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	SPAM1	P38567	509 aa		6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	CDH15	P55291	814 aa		6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	HTRA4	P83105	476 aa	Predicted RBP	6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	ZP2	Q05996	745 aa		6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	BFSP2	Q13515	415 aa		6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	COL9A3	Q14050	684 aa	Predicted RBP	6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	TYSND1	Q2T9J0	566 aa		6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	AASDH	Q4L235	1098 aa	Predicted RBP	6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	KLHL26	Q53HC5	615 aa		6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	YIF1B	Q5BJH7	314 aa		6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	DARS2	Q6PI48	645 aa	Known RBP	6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	SYCE2	Q6PIF2	218 aa		6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	LINC00523	Q86TU6	105 aa		6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	NAGS	Q8N159	534 aa		6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	EXOSC8	Q96B26	276 aa	Known RBP	6.11	□□□□□ -1.43
NECAP1-222	ENST00000640072	HMCES	Q96FZ2	354 aa		6.11	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms