RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 CREB5Q02930 508 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 INTS6LQ5JSJ4 861 aaKnown RBP19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 VWA5B1Q5TIE3 1220 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 RIOX2Q8IUF8 465 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 RBM47A0AV96 593 aaKnown RBP19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 IDI2Q9BXS1 227 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 TAS2R1Q9NYW7 299 aa19.23■□□□□ 0.67
CACNA1A-257ENST00000638009 ARPC2O15144 300 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 DCDC1P59894 354 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 MYNNQ9NPC7 610 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 CYP4F8P98187 520 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 KCTD7Q96MP8 289 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 THUMPD1Q9NXG2 353 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 FABP3P05413 133 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 ZNF20P17024 532 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 YAP1P46937 504 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 PNLIPRP1P54315 467 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 CA9Q16790 459 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 SLC16A9Q7RTY1 509 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 UPF1Q92900 1129 aaKnown RBP eCLIP19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 COQ8BQ96D53 544 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 KCNH7Q9NS40 1196 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 ABCC13Q9NSE7 274 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 PCDHB5Q9Y5E4 795 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 IFNW1P05000 195 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 TGFB3P10600 412 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 CD247P20963 164 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 MAP3K8P41279 467 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 GBX2P52951 348 aaPredicted RBP19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 MFSD8Q8NHS3 518 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 TDRD3Q9H7E2 651 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 TLL2Q9Y6L7 1015 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 RPL21P46778 160 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 CFL1P23528 166 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 FAM83AQ86UY5 434 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 PHYKPLQ8IUZ5 450 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 OR2T12Q8NG77 320 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 ZNHIT2Q9UHR6 403 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 POFUT2Q9Y2G5 429 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 TNFRSF10BO14763 440 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 RENP00797 406 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 CRISP1P54107 249 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 LAPTM5Q13571 262 aa19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 CAND1Q86VP6 1230 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-257ENST00000638009 UROSP10746 265 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 MAPK12P53778 367 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 OR2B6P58173 313 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 RPL38P63173 70 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 ZNF517Q6ZMY9 492 aaPredicted RBP19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 ECHDC2Q86YB7 292 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 TMEM86AQ8N2M4 240 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 PNPLA6Q8IY17 1366 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 C9IYK1 514 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 GJA9P57773 515 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 GNMTQ14749 295 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 C3orf33Q6P1S2 294 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 OR51D1Q8NGF3 324 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 AGAP11Q8TF27 550 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 ASB8Q9H765 288 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 FPGTO14772 594 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 HSPA12AO43301 675 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 MAP3K6O95382 1288 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 RAB36O95755 333 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 TRBC1P01850 177 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 SLC30A6Q6NXT4 461 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 SPATA20Q8TB22 786 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 SEMA4AQ9H3S1 761 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 GRK6P43250 576 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 TTI2Q6NXR4 508 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 SAMD14Q8IZD0 417 aaPredicted RBP19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 TCEAL7Q9BRU2 100 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 BRD9Q9H8M2 597 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 DOCK8Q8NF50 2099 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 MOB2Q70IA6 237 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 B3GNT4Q9C0J1 378 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 C1orf109Q9NX04 203 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 ZNF510Q9Y2H8 683 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 HHLA1C9JL84 531 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 IFI30P13284 250 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 ECT2LQ008S8 904 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 CFAP97Q9P2B7 532 aa19.21■□□□□ 0.67
CACNA1A-257ENST00000638009 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.21■□□□□ 0.66
CACNA1A-257ENST00000638009 CACNB4O00305 520 aaPredicted RBP19.21■□□□□ 0.66
CACNA1A-257ENST00000638009 ARFRP1Q13795 201 aa19.21■□□□□ 0.66
CACNA1A-257ENST00000638009 SLC30A10Q6XR72 485 aa19.21■□□□□ 0.66
CACNA1A-257ENST00000638009 GPR135Q8IZ08 494 aa19.21■□□□□ 0.66
CACNA1A-257ENST00000638009 ARL8BQ9NVJ2 186 aa19.21■□□□□ 0.66
CACNA1A-257ENST00000638009 DLG5Q8TDM6 1919 aa19.2■□□□□ 0.66
CACNA1A-257ENST00000638009 HTATIP2Q9BUP3 242 aa19.2■□□□□ 0.66
CACNA1A-257ENST00000638009 PBDC1Q9BVG4 233 aa19.2■□□□□ 0.66
CACNA1A-257ENST00000638009 TAS2R3Q9NYW6 316 aa19.2■□□□□ 0.66
CACNA1A-257ENST00000638009 MDC1Q14676 2089 aaKnown RBP19.2■□□□□ 0.66
CACNA1A-257ENST00000638009 ENTPD6O75354 484 aa19.2■□□□□ 0.66
CACNA1A-257ENST00000638009 MATN4O95460 622 aa19.2■□□□□ 0.66
CACNA1A-257ENST00000638009 MMP10P09238 476 aa19.2■□□□□ 0.66
CACNA1A-257ENST00000638009 IL12BP29460 328 aa19.2■□□□□ 0.66
CACNA1A-257ENST00000638009 COL28A1Q2UY09 1125 aa19.2■□□□□ 0.66
CACNA1A-257ENST00000638009 ABRAQ8N0Z2 381 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms