RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 IL25Q9H293 177 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 MBD2Q9UBB5 411 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 TNPO3Q9Y5L0 923 aaKnown RBP17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 FAM155BO75949 473 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 OR2L8Q8NGY9 312 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 ADGRE2Q9UHX3 823 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 GRIP1Q9Y3R0 1128 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 ASGR1P07306 291 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 ZNF823P16415 610 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 BTN3A2P78410 334 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 GPM6BQ13491 265 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 TAB1Q15750 504 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 TMEM164Q5U3C3 297 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 GPR107Q5VW38 600 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 TRMT10AQ8TBZ6 339 aaKnown RBP17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 IL17RBQ9NRM6 502 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 VNN3Q9NY84 501 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 NEXMIFQ5QGS0 1516 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 GRXCR1A8MXD5 290 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 PGRMC2O15173 223 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 CHP2O43745 196 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 TOB1P50616 345 aaPredicted RBP17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 CATSPERGQ6ZRH7 1159 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 SYNPOQ8N3V7 929 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 SPERTQ8NA61 448 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 CPT1CQ8TCG5 803 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 COX4I2Q96KJ9 171 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 C12orf4Q9NQ89 552 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 KLRF1Q9NZS2 232 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 SSR3Q9UNL2 185 aa17.73■□□□□ 0.43
CACNA1A-227ENST00000636549 INHAP05111 366 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 JMJD7P0C870 316 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 RIC1Q4ADV7 1423 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 KCNE2Q9Y6J6 123 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 A0A1W2PRU2 124 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 C1QBPQ07021 282 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 INTS6LQ5JSJ4 861 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 GALNT11Q8NCW6 608 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 CLPTM1LQ96KA5 538 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 TDRD1Q9BXT4 1180 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 BLOC1S4Q9NUP1 217 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 KELP23276 732 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 EIF2S3LQ2VIR3 472 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 CARD17Q5XLA6 110 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 MMAAQ8IVH4 418 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 UNC5BQ8IZJ1 945 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 COPS8Q99627 209 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 CHID1Q9BWS9 393 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 CROCC2H7BZ55 1655 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 ATP6V1G2O95670 118 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 TYRP1P17643 537 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 RPL10P27635 214 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 PTPN4P29074 926 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 PPP3R1P63098 170 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 LYPLAL1Q5VWZ2 237 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 CAPN13Q6MZZ7 669 aaPredicted RBP17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 ZNF598Q86UK7 904 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 SIDT2Q8NBJ9 832 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 NKX2-3Q8TAU0 364 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 IL22Q9GZX6 179 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 AGO3Q9H9G7 860 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 DKK3Q9UBP4 350 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 TNFAIP8O95379 198 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 NFATC1O95644 943 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 MSL3P1P0C860 447 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 HSD11B1P28845 292 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 MECP2P51608 486 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 ZCCHC12Q6PEW1 402 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 ZNF227Q86WZ6 799 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 FAM46DQ8NEK8 389 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 GPR151Q8TDV0 419 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 PCDHGC4Q9Y5F7 938 aa17.72■□□□□ 0.43
CACNA1A-227ENST00000636549 SUV39H1O43463 412 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 S100A9P06702 114 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 TKTP29401 623 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 RIPK1Q13546 671 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 GPR180Q86V85 440 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 ZSCAN1Q8NBB4 408 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 TBATAQ96M53 351 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 TBC1D17Q9HA65 648 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 PMF1-BGLAPU3KQ54 211 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 CDC42BPBQ9Y5S2 1711 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 RPP14O95059 124 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 SHBGP04278 402 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 ARSIQ5FYB1 569 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 RAI2Q9Y5P3 530 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 SLC26A4O43511 780 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 SNRPB2P08579 225 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 CYP2C18P33260 490 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 ZNF460Q14592 562 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 NKAPQ8N5F7 415 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 ESAMQ96AP7 390 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 RRN3Q9NYV6 651 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 RPLP2P05387 115 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 ADRB2P07550 413 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 RAB10P61026 200 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 BNIP2Q12982 314 aa17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 GANABQ14697 944 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-227ENST00000636549 ZNF398Q8TD17 642 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms