RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 ART3Q13508 389 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 DCTN2Q13561 401 aaKnown RBP15.4■□□□□ 0.06
CLN8-209ENST00000635970 MYBPC3Q14896 1274 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 MYLK3Q32MK0 819 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 LIPMQ5VYY2 423 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 NUDT18Q6ZVK8 323 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 METTL25Q8N6Q8 603 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 ZNF557Q8N988 423 aaPredicted RBP15.4■□□□□ 0.06
CLN8-209ENST00000635970 DTWD2Q8NBA8 298 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 TXNDC5Q8NBS9 432 aaKnown RBP15.4■□□□□ 0.06
CLN8-209ENST00000635970 WFIKKN2Q8TEU8 576 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 CNBD2Q96M20 576 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 TSNARE1Q96NA8 513 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 OR52B2Q96RD2 323 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 MUC3BQ9H195 1237 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 PREBQ9HCU5 417 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 TMEM248Q9NWD8 314 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 SPATA6Q9NWH7 488 aaPredicted RBP15.4■□□□□ 0.06
CLN8-209ENST00000635970 SYBUQ9NX95 663 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 CACNA2D2Q9NY47 1150 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 BFARQ9NZS9 450 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 WASH3PC4AMC7 463 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 ZMPSTE24O75844 475 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 ERVK-10P10266 1014 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 COL6A2P12110 1019 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 IMPDH2P12268 514 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 POLD2P49005 469 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 THOP1P52888 689 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 MRPS22P82650 360 aaKnown RBP15.4■□□□□ 0.06
CLN8-209ENST00000635970 IRAK1BP1Q5VVH5 260 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 ZYG11AQ6WRX3 759 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 STRA8Q7Z7C7 330 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 NETO2Q8NC67 525 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 OR7D4Q8NG98 312 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 MAPK15Q8TD08 544 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 ALG14Q96F25 216 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 PRPF18Q99633 342 aaKnown RBP15.4■□□□□ 0.06
CLN8-209ENST00000635970 FEM1AQ9BSK4 669 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 GATA5Q9BWX5 397 aaPredicted RBP15.4■□□□□ 0.06
CLN8-209ENST00000635970 OSBPL11Q9BXB4 747 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 CDYLQ9Y232 598 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 MFHAS1Q9Y4C4 1052 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 OR51B4Q9Y5P0 310 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 CKAP5Q14008 2032 aa15.39■□□□□ 0.05
CLN8-209ENST00000635970 ADAM23O75077 832 aa15.39■□□□□ 0.05
CLN8-209ENST00000635970 TRMUO75648 421 aaKnown RBP15.39■□□□□ 0.05
CLN8-209ENST00000635970 IL12RB1P42701 662 aa15.39■□□□□ 0.05
CLN8-209ENST00000635970 TUBA4AP68366 448 aa15.39■□□□□ 0.05
CLN8-209ENST00000635970 CRADDP78560 199 aa15.39■□□□□ 0.05
CLN8-209ENST00000635970 TXNL4AP83876 142 aaKnown RBP15.39■□□□□ 0.05
CLN8-209ENST00000635970 SULT2A1Q06520 285 aa15.39■□□□□ 0.05
CLN8-209ENST00000635970 EIF4HQ15056 248 aaKnown RBP15.39■□□□□ 0.05
CLN8-209ENST00000635970 PTPRNQ16849 979 aa15.39■□□□□ 0.05
CLN8-209ENST00000635970 LSM12Q3MHD2 195 aaKnown RBP15.39■□□□□ 0.05
CLN8-209ENST00000635970 NAPRTQ6XQN6 538 aa15.39■□□□□ 0.05
CLN8-209ENST00000635970 ERI1Q8IV48 349 aaKnown RBP15.39■□□□□ 0.05
CLN8-209ENST00000635970 CROCCP3Q8IVE0 287 aa15.39■□□□□ 0.05
CLN8-209ENST00000635970 RBM12BQ8IXT5 1001 aaKnown RBP15.39■□□□□ 0.05
CLN8-209ENST00000635970 CHPFQ8IZ52 775 aa15.39■□□□□ 0.05
CLN8-209ENST00000635970 ZNF366Q8N895 744 aa15.39■□□□□ 0.05
CLN8-209ENST00000635970 RTL3Q8N8U3 475 aaKnown RBP15.39■□□□□ 0.05
CLN8-209ENST00000635970 GRIP2Q9C0E4 1043 aa15.39■□□□□ 0.05
CLN8-209ENST00000635970 COPS7BQ9H9Q2 264 aaPredicted RBP15.39■□□□□ 0.05
CLN8-209ENST00000635970 WDR41Q9HAD4 459 aa15.39■□□□□ 0.05
CLN8-209ENST00000635970 ZBTB26Q9HCK0 441 aa15.39■□□□□ 0.05
CLN8-209ENST00000635970 SLC17A6Q9P2U8 582 aa15.39■□□□□ 0.05
CLN8-209ENST00000635970 CHURC1-FNTBB4DL54 471 aa15.38■□□□□ 0.05
CLN8-209ENST00000635970 TRIM38O00635 465 aa15.38■□□□□ 0.05
CLN8-209ENST00000635970 PFDN1O60925 122 aa15.38■□□□□ 0.05
CLN8-209ENST00000635970 ZNF23P17027 643 aa15.38■□□□□ 0.05
CLN8-209ENST00000635970 ERCC2P18074 760 aa15.38■□□□□ 0.05
CLN8-209ENST00000635970 XRCC1P18887 633 aaPredicted RBP15.38■□□□□ 0.05
CLN8-209ENST00000635970 POLR2EP19388 210 aaKnown RBP15.38■□□□□ 0.05
CLN8-209ENST00000635970 TFEBP19484 476 aa15.38■□□□□ 0.05
CLN8-209ENST00000635970 NPY2RP49146 381 aa15.38■□□□□ 0.05
CLN8-209ENST00000635970 STK19P49842 368 aaPredicted RBP15.38■□□□□ 0.05
CLN8-209ENST00000635970 MRPS21P82921 87 aaKnown RBP15.38■□□□□ 0.05
CLN8-209ENST00000635970 PEX6Q13608 980 aa15.38■□□□□ 0.05
CLN8-209ENST00000635970 ZNF234Q14588 700 aa15.38■□□□□ 0.05
CLN8-209ENST00000635970 TSSK4Q6SA08 328 aa15.38■□□□□ 0.05
CLN8-209ENST00000635970 PLD6Q8N2A8 252 aaKnown RBP15.38■□□□□ 0.05
CLN8-209ENST00000635970 SPEM1Q8N4L4 309 aa15.38■□□□□ 0.05
CLN8-209ENST00000635970 BHLHE22Q8NFJ8 381 aaPredicted RBP15.38■□□□□ 0.05
CLN8-209ENST00000635970 ASB9Q96DX5 294 aa15.38■□□□□ 0.05
CLN8-209ENST00000635970 RPL10LQ96L21 214 aaKnown RBP15.38■□□□□ 0.05
CLN8-209ENST00000635970 MRPL1Q9BYD6 325 aaKnown RBP15.38■□□□□ 0.05
CLN8-209ENST00000635970 BRD8Q9H0E9 1235 aa15.38■□□□□ 0.05
CLN8-209ENST00000635970 NOL6Q9H6R4 1146 aaKnown RBP15.38■□□□□ 0.05
CLN8-209ENST00000635970 CATSPERBQ9H7T0 1116 aa15.38■□□□□ 0.05
CLN8-209ENST00000635970 SUCOQ9UBS9 1254 aaKnown RBP15.38■□□□□ 0.05
CLN8-209ENST00000635970 ACOT8O14734 319 aa15.38■□□□□ 0.05
CLN8-209ENST00000635970 FGF10O15520 208 aaPredicted RBP15.38■□□□□ 0.05
CLN8-209ENST00000635970 SNAP91O60641 907 aa15.38■□□□□ 0.05
CLN8-209ENST00000635970 AP2A1O95782 977 aa15.38■□□□□ 0.05
CLN8-209ENST00000635970 C2P06681 752 aa15.38■□□□□ 0.05
CLN8-209ENST00000635970 CDK4P11802 303 aa15.38■□□□□ 0.05
CLN8-209ENST00000635970 HNRNPLP14866 589 aaKnown RBP eCLIP15.38■□□□□ 0.05
CLN8-209ENST00000635970 ACVRL1P37023 503 aa15.38■□□□□ 0.05
CLN8-209ENST00000635970 MAPKAPK2P49137 400 aa15.38■□□□□ 0.05
CLN8-209ENST00000635970 INHBCP55103 352 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms