RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 COPG2Q9UBF2 871 aa7.48□□□□□ -1.21
PTP4A1-206ENST00000627002 TRMT6Q9UJA5 497 aaKnown RBP7.48□□□□□ -1.21
PTP4A1-206ENST00000627002 EMCNQ9ULC0 261 aa7.48□□□□□ -1.21
PTP4A1-206ENST00000627002 SCML1Q9UN30 329 aa7.48□□□□□ -1.21
PTP4A1-206ENST00000627002 OAS3Q9Y6K5 1087 aaKnown RBP7.48□□□□□ -1.21
PTP4A1-206ENST00000627002 MIA3Q5JRA6 1907 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 IGLV3-16A0A075B6K0 115 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 LOC730098B7Z3J9 87 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 QSOX1O00391 747 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 ARHGAP33O14559 1287 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 MID1O15344 667 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 TSPAN6O43657 245 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 LZTS3O60299 673 aaPredicted RBP7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 OR1I1O60431 355 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 EDF1O60869 148 aaKnown RBP7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 GPR37L1O60883 481 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 AP2A2O94973 939 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 KLF8O95600 359 aaPredicted RBP7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 TOP3BO95985 862 aaKnown RBP7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 DNTTP04053 509 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 SERPINE1P05121 402 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 ASGR2P07307 311 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 OR56A5P0C7T3 313 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 RALBP11234 206 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 HOXB2P14652 356 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 ZNF37AP17032 561 aaPredicted RBP7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 CHRM3P20309 590 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 GRK2P25098 689 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 ALDH3A1P30838 453 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 ETV3P41162 512 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 METAP1P53582 386 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 ATP6V0D1P61421 351 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 RPS14P62263 151 aaKnown RBP7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 IRX4P78413 519 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 TIAL1Q01085 375 aaKnown RBP eCLIP7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 CREB5Q02930 508 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 ZBTB16Q05516 673 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 CNTN1Q12860 1018 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 STX3Q13277 289 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 CSHL1Q14406 222 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 PCLAFQ15004 111 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 CHI3L2Q15782 390 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 CRY1Q16526 586 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 ATP13A5Q4VNC0 1218 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 SLC44A4Q53GD3 710 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 C2orf27AQ580R0 203 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 EOGTQ5NDL2 527 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 CTSL3PQ5NE16 218 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 LDLRAP1Q5SW96 308 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 HENMT1Q5T8I9 393 aaKnown RBP7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 PIP5KL1Q5T9C9 394 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 GKAP1Q5VSY0 366 aaPredicted RBP7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 ZYG11AQ6WRX3 759 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 Q6ZVL8 140 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 PIM3Q86V86 326 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 NLRP8Q86W28 1048 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 PLD6Q8N2A8 252 aaKnown RBP7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 FSTL5Q8N475 847 aaPredicted RBP7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 PNPLA1Q8N8W4 532 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 IL17RCQ8NAC3 791 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 TXNDC5Q8NBS9 432 aaKnown RBP7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 ZNF473Q8WTR7 871 aaKnown RBP7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 FAM3CQ92520 227 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 CCDC126Q96EE4 140 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 DTD2Q96FN9 168 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 DCUN1D1Q96GG9 259 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 GPR78Q96P69 363 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 VPS35Q96QK1 796 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 PANX3Q96QZ0 392 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 WRAP53Q9BUR4 548 aaKnown RBP7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 MECRQ9BV79 373 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 TSSK1BQ9BXA7 367 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 PITPNM3Q9BZ71 974 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 DERL2Q9GZP9 239 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 FAM107BQ9H098 131 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 ZDHHC4Q9NPG8 344 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 IGSF5Q9NSI5 407 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 FGFR1OP2Q9NVK5 253 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 ZNF358Q9NW07 568 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 KLHL42Q9P2K6 505 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 ITM2BQ9Y287 266 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 FADS3Q9Y5Q0 445 aa7.47□□□□□ -1.21
PTP4A1-206ENST00000627002 CDH23Q9H251 3354 aa7.46□□□□□ -1.21
PTP4A1-206ENST00000627002 MYLKQ15746 1914 aa7.46□□□□□ -1.21
PTP4A1-206ENST00000627002 EYSQ5T1H1 3165 aa7.46□□□□□ -1.22
PTP4A1-206ENST00000627002 G3V2L1 256 aa7.46□□□□□ -1.22
PTP4A1-206ENST00000627002 GPR39O43194 453 aa7.46□□□□□ -1.22
PTP4A1-206ENST00000627002 SPINT1O43278 529 aa7.46□□□□□ -1.22
PTP4A1-206ENST00000627002 NARSO43776 548 aaKnown RBP7.46□□□□□ -1.22
PTP4A1-206ENST00000627002 MAGEC1O60732 1142 aa7.46□□□□□ -1.22
PTP4A1-206ENST00000627002 TRIM13O60858 407 aa7.46□□□□□ -1.22
PTP4A1-206ENST00000627002 DNAJC6O75061 913 aa7.46□□□□□ -1.22
PTP4A1-206ENST00000627002 NIPSNAP2O75323 286 aa7.46□□□□□ -1.22
PTP4A1-206ENST00000627002 RNASEH2AO75792 299 aaKnown RBP7.46□□□□□ -1.22
PTP4A1-206ENST00000627002 RECQL5O94762 991 aaPredicted RBP7.46□□□□□ -1.22
PTP4A1-206ENST00000627002 TROVE2P10155 538 aaKnown RBP eCLIP7.46□□□□□ -1.22
PTP4A1-206ENST00000627002 C6P13671 934 aa7.46□□□□□ -1.22
PTP4A1-206ENST00000627002 TFEBP19484 476 aa7.46□□□□□ -1.22
PTP4A1-206ENST00000627002 MSH3P20585 1137 aa7.46□□□□□ -1.22
PTP4A1-206ENST00000627002 BGNP21810 368 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms