RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, human

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-222	ENST00000625672	CD247	P20963	164 aa		13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	ECHS1	P30084	290 aa		13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	SLC6A9	P48067	706 aa		13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	GCNT6	Q5T4J0	391 aa		13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	ZNF611	Q8N823	705 aa		13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	PAPSS1	O43252	624 aa	Predicted RBP	13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	PUM1	Q14671	1186 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	BTN2A3P	Q96KV6	586 aa		13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	CHST7	Q9NS84	486 aa		13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	BTN3A2	P78410	334 aa		13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	IFI35	P80217	286 aa	Predicted RBP	13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	NAE1	Q13564	534 aa		13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	ABCA11P	Q4W5N1	156 aa		13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	CCDC36	Q8IYA8	594 aa		13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	CEP295NL	Q96MC4	621 aa		13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	PRDM12	Q9H4Q4	367 aa		13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	PTCH2	Q9Y6C5	1203 aa		13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	PEX12	O00623	359 aa		13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	OR1I1	O60431	355 aa		13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	PER3	P56645	1201 aa		13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	BNIP2	Q12982	314 aa		13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	LINGO4	Q6UY18	593 aa		13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	C1orf216	Q8TAB5	229 aa		13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	LRRC46	Q96FV0	321 aa		13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	SMURF1	Q9HCE7	757 aa		13.78	□□□□□ -0.2
NRXN1-222	ENST00000625672	METTL18	O95568	372 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	AP1S1	P61966	158 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	RGS21	Q2M5E4	152 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	SMARCD3	Q6STE5	483 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	MOB2	Q70IA6	237 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	CCDC80	Q76M96	950 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	TRPV1	Q8NER1	839 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	TSSK3	Q96PN8	268 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	CDC42BPA	Q5VT25	1732 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	SH3D21	A4FU49	640 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	CAPN14	A8MX76	684 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	GJB1	P08034	283 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	PTPN2	P17706	415 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	OGN	P20774	298 aa	Known RBP	13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	VPS26B	Q4G0F5	336 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	BRMS1L	Q5PSV4	323 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	UBXN11	Q5T124	520 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	NETO2	Q8NC67	525 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	OR4C6	Q8NH72	309 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	RNF157	Q96PX1	679 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	PURB	Q96QR8	312 aa	Known RBP	13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	RAI2	Q9Y5P3	530 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672		H0YGN5	161 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	ZNF806	P0C7X5	589 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	ADAR	P55265	1226 aa	Known RBP	13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	POU5F1	Q01860	360 aa	Known RBP	13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	CCIN	Q13939	588 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	UBAP2L	Q14157	1087 aa	Known RBP	13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	NAIF1	Q69YI7	327 aa	Predicted RBP	13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	QSOX2	Q6ZRP7	698 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	ADGRA1	Q86SQ6	560 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	COX18	Q8N8Q8	333 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	RIMKLB	Q9ULI2	386 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	CLUH	O75153	1309 aa		13.77	□□□□□ -0.2
NRXN1-222	ENST00000625672	FAM237B	A0A1B0GVD1	139 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	TULP3	O75386	442 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	MATK	P42679	507 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	MTTP	P55157	894 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	C9orf57	Q5W0N0	161 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	CWF19L1	Q69YN2	538 aa	Known RBP	13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	SLC9A9	Q8IVB4	645 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	FBXW8	Q8N3Y1	598 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	SPPL2B	Q8TCT7	592 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	CAVIN3	Q969G5	261 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	GAL3ST1	Q99999	423 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	MRPL45	Q9BRJ2	306 aa	Known RBP	13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	NXF3	Q9H4D5	531 aa	Known RBP	13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	PACSIN3	Q9UKS6	424 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672		B4DGG1	531 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	SLC33A1	O00400	549 aa	Predicted RBP	13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	ASMT	P46597	345 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	CBX3	Q13185	183 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	UBE2J2	Q8N2K1	259 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	APOLD1	Q96LR9	279 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	CDT1	Q9H211	546 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	DNAJC28	Q9NX36	388 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	YDJC	A8MPS7	323 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	AKAP8	O43823	692 aa	Known RBP	13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	PGAM2	P15259	253 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	ATP5A1	P25705	553 aa	Known RBP	13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	CAP1	Q01518	475 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	PLPPR4	Q7Z2D5	763 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	TREML1	Q86YW5	311 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	ZZZ3	Q8IYH5	903 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	SLAIN1	Q8ND83	568 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	EBNA1BP2	Q99848	306 aa	Known RBP	13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	CLDND1	Q9NY35	253 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	GGA2	Q9UJY4	613 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	IFT52	Q9Y366	437 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	PCDHB1	Q9Y5F3	818 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672		A8MU76	341 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	IL33	O95760	270 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	SLC25A3	Q00325	362 aa		13.77	□□□□□ -0.21
NRXN1-222	ENST00000625672	CARTPT	Q16568	116 aa		13.77	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms