RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 ZBED6P86452 979 aa14.28□□□□□ -0.12
TUBB3-215ENST00000625617 SRSF1Q07955 248 aaKnown RBP eCLIP14.28□□□□□ -0.12
TUBB3-215ENST00000625617 FOXM1Q08050 763 aa14.28□□□□□ -0.12
TUBB3-215ENST00000625617 PTPN13Q12923 2485 aa14.28□□□□□ -0.12
TUBB3-215ENST00000625617 ZBTB17Q13105 803 aa14.28□□□□□ -0.12
TUBB3-215ENST00000625617 DEFB109BQ30KR1 87 aa14.28□□□□□ -0.12
TUBB3-215ENST00000625617 PLA2G4EQ3MJ16 856 aa14.28□□□□□ -0.12
TUBB3-215ENST00000625617 CRTC2Q53ET0 693 aaPredicted RBP14.28□□□□□ -0.12
TUBB3-215ENST00000625617 LACTB2Q53H82 288 aaPredicted RBP14.28□□□□□ -0.12
TUBB3-215ENST00000625617 C16orf46Q6P387 395 aa14.28□□□□□ -0.12
TUBB3-215ENST00000625617 PQLC3Q8N755 202 aa14.28□□□□□ -0.12
TUBB3-215ENST00000625617 C9orf72Q96LT7 481 aa14.28□□□□□ -0.12
TUBB3-215ENST00000625617 PLEKHG4BQ96PX9 1271 aa14.28□□□□□ -0.12
TUBB3-215ENST00000625617 ZSCAN5AQ9BUG6 496 aa14.28□□□□□ -0.12
TUBB3-215ENST00000625617 ZFYVE1Q9HBF4 777 aa14.28□□□□□ -0.12
TUBB3-215ENST00000625617 CTTNBP2NLQ9P2B4 639 aa14.28□□□□□ -0.12
TUBB3-215ENST00000625617 ADGRG1Q9Y653 693 aa14.28□□□□□ -0.12
TUBB3-215ENST00000625617 PDZK1P1A8MUH7 402 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 UBXN7O94888 489 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 VIPP01282 170 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 C9P02748 559 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 TYRP1P17643 537 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 TPM4P67936 248 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 IFI35P80217 286 aaPredicted RBP14.27□□□□□ -0.13
TUBB3-215ENST00000625617 FOXK1P85037 733 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 PPIDQ08752 370 aaKnown RBP14.27□□□□□ -0.13
TUBB3-215ENST00000625617 SLC10A2Q12908 348 aaPredicted RBP14.27□□□□□ -0.13
TUBB3-215ENST00000625617 IQCB1Q15051 598 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 SEPT7Q16181 437 aaKnown RBP14.27□□□□□ -0.13
TUBB3-215ENST00000625617 ZNF648Q5T619 568 aaPredicted RBP14.27□□□□□ -0.13
TUBB3-215ENST00000625617 ATP1A1-AS1Q5TC04 95 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 PDPK2PQ6A1A2 396 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 TMEM26Q6ZUK4 368 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 TRAM1L1Q8N609 369 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 GLYATL1Q969I3 302 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 IQCDQ96DY2 449 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 ABHD17AQ96GS6 310 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 TGM7Q96PF1 710 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 TRIM39Q9HCM9 518 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 RAD18Q9NS91 495 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 OGFRQ9NZT2 677 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 UVRAGQ9P2Y5 699 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 NFKBIL1Q9UBC1 381 aaPredicted RBP14.27□□□□□ -0.13
TUBB3-215ENST00000625617 LCMT1Q9UIC8 334 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 SHOC2Q9UQ13 582 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 DNAJC16Q9Y2G8 782 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 KCTD3Q9Y597 815 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 BSNQ9UPA5 3926 aa14.27□□□□□ -0.13
TUBB3-215ENST00000625617 CHUKO15111 745 aa14.26□□□□□ -0.13
TUBB3-215ENST00000625617 RASSF9O75901 435 aa14.26□□□□□ -0.13
TUBB3-215ENST00000625617 PIRTP0C851 137 aa14.26□□□□□ -0.13
TUBB3-215ENST00000625617 AMD1P17707 334 aa14.26□□□□□ -0.13
TUBB3-215ENST00000625617 XRCC1P18887 633 aaPredicted RBP14.26□□□□□ -0.13
TUBB3-215ENST00000625617 PBX1P40424 430 aa14.26□□□□□ -0.13
TUBB3-215ENST00000625617 FANCCQ00597 558 aa14.26□□□□□ -0.13
TUBB3-215ENST00000625617 CAVIN1Q6NZI2 390 aaKnown RBP14.26□□□□□ -0.13
TUBB3-215ENST00000625617 ADGRG6Q86SQ4 1221 aa14.26□□□□□ -0.13
TUBB3-215ENST00000625617 LRRTM4Q86VH4 590 aa14.26□□□□□ -0.13
TUBB3-215ENST00000625617 CNTD1Q8N815 330 aa14.26□□□□□ -0.13
TUBB3-215ENST00000625617 GPR26Q8NDV2 337 aa14.26□□□□□ -0.13
TUBB3-215ENST00000625617 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.26□□□□□ -0.13
TUBB3-215ENST00000625617 CPLX3Q8WVH0 158 aa14.26□□□□□ -0.13
TUBB3-215ENST00000625617 CTNNBL1Q8WYA6 563 aaPredicted RBP14.26□□□□□ -0.13
TUBB3-215ENST00000625617 EID2BQ96D98 161 aa14.26□□□□□ -0.13
TUBB3-215ENST00000625617 STAMBPL1Q96FJ0 436 aa14.26□□□□□ -0.13
TUBB3-215ENST00000625617 TRIB3Q96RU7 358 aa14.26□□□□□ -0.13
TUBB3-215ENST00000625617 TIMM29Q9BSF4 260 aa14.26□□□□□ -0.13
TUBB3-215ENST00000625617 CEP41Q9BYV8 373 aa14.26□□□□□ -0.13
TUBB3-215ENST00000625617 POT1Q9NUX5 634 aa14.26□□□□□ -0.13
TUBB3-215ENST00000625617 SCHIP1Q9P0W5 487 aaPredicted RBP14.26□□□□□ -0.13
TUBB3-215ENST00000625617 ANKMY1Q9P2S6 941 aa14.26□□□□□ -0.13
TUBB3-215ENST00000625617 CROTQ9UKG9 612 aa14.26□□□□□ -0.13
TUBB3-215ENST00000625617 CAPN11Q9UMQ6 739 aa14.26□□□□□ -0.13
TUBB3-215ENST00000625617 LUC7L2Q9Y383 392 aaKnown RBP14.26□□□□□ -0.13
TUBB3-215ENST00000625617 ZNF711Q9Y462 761 aa14.26□□□□□ -0.13
TUBB3-215ENST00000625617 PCDHB3Q9Y5E6 796 aa14.26□□□□□ -0.13
TUBB3-215ENST00000625617 MRPS18BQ9Y676 258 aaKnown RBP14.26□□□□□ -0.13
TUBB3-215ENST00000625617 NAV2Q8IVL1 2488 aa14.26□□□□□ -0.13
TUBB3-215ENST00000625617 LRRD1A4D1F6 860 aa14.25□□□□□ -0.13
TUBB3-215ENST00000625617 PRR19A6NJB7 356 aa14.25□□□□□ -0.13
TUBB3-215ENST00000625617 KMOO15229 486 aa14.25□□□□□ -0.13
TUBB3-215ENST00000625617 TOX3O15405 576 aaPredicted RBP14.25□□□□□ -0.13
TUBB3-215ENST00000625617 H2AFZP0C0S5 128 aa14.25□□□□□ -0.13
TUBB3-215ENST00000625617 ZNF28P17035 718 aa14.25□□□□□ -0.13
TUBB3-215ENST00000625617 ZNF7P17097 686 aaPredicted RBP14.25□□□□□ -0.13
TUBB3-215ENST00000625617 DLSTP36957 453 aa14.25□□□□□ -0.13
TUBB3-215ENST00000625617 SLC19A1P41440 591 aa14.25□□□□□ -0.13
TUBB3-215ENST00000625617 CAPZBP47756 277 aa14.25□□□□□ -0.13
TUBB3-215ENST00000625617 SEPHS1P49903 392 aa14.25□□□□□ -0.13
TUBB3-215ENST00000625617 IGFBP7Q16270 282 aa14.25□□□□□ -0.13
TUBB3-215ENST00000625617 PCSK7Q16549 785 aa14.25□□□□□ -0.13
TUBB3-215ENST00000625617 C6orf15Q6UXA7 325 aaPredicted RBP14.25□□□□□ -0.13
TUBB3-215ENST00000625617 H2AFVQ71UI9 128 aa14.25□□□□□ -0.13
TUBB3-215ENST00000625617 PRSS42Q7Z5A4 293 aa14.25□□□□□ -0.13
TUBB3-215ENST00000625617 RASGRP3Q8IV61 690 aa14.25□□□□□ -0.13
TUBB3-215ENST00000625617 PLD5Q8N7P1 536 aa14.25□□□□□ -0.13
TUBB3-215ENST00000625617 GALNT6Q8NCL4 622 aa14.25□□□□□ -0.13
TUBB3-215ENST00000625617 RAPGEF5Q92565 580 aa14.25□□□□□ -0.13
TUBB3-215ENST00000625617 RSC1A1Q92681 617 aa14.25□□□□□ -0.13
TUBB3-215ENST00000625617 RNF31Q96EP0 1072 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms