RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 SERPINB6P35237 376 aa14.47□□□□□ -0.09
PNKP-218ENST00000625299 CCL11P51671 97 aa14.47□□□□□ -0.09
PNKP-218ENST00000625299 UBXN1Q04323 297 aa14.47□□□□□ -0.09
PNKP-218ENST00000625299 MRPL49Q13405 166 aaKnown RBP14.47□□□□□ -0.09
PNKP-218ENST00000625299 DPYSL2Q16555 572 aa14.47□□□□□ -0.09
PNKP-218ENST00000625299 INSCQ1MX18 579 aa14.47□□□□□ -0.09
PNKP-218ENST00000625299 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.47□□□□□ -0.09
PNKP-218ENST00000625299 PRR7Q8TB68 274 aa14.47□□□□□ -0.09
PNKP-218ENST00000625299 ENOX1Q8TC92 643 aaKnown RBP14.47□□□□□ -0.09
PNKP-218ENST00000625299 RSC1A1Q92681 617 aa14.47□□□□□ -0.09
PNKP-218ENST00000625299 WDR24Q96S15 920 aa14.47□□□□□ -0.09
PNKP-218ENST00000625299 TDRD1Q9BXT4 1180 aaKnown RBP14.47□□□□□ -0.09
PNKP-218ENST00000625299 BRD8Q9H0E9 1235 aa14.47□□□□□ -0.09
PNKP-218ENST00000625299 NUP62CLQ9H1M0 184 aa14.47□□□□□ -0.09
PNKP-218ENST00000625299 OR2AG1Q9H205 316 aa14.47□□□□□ -0.09
PNKP-218ENST00000625299 CARD9Q9H257 536 aa14.47□□□□□ -0.09
PNKP-218ENST00000625299 FAM83DQ9H4H8 585 aa14.47□□□□□ -0.09
PNKP-218ENST00000625299 ACSS2Q9NR19 701 aa14.47□□□□□ -0.09
PNKP-218ENST00000625299 PKD2L2Q9NZM6 624 aa14.47□□□□□ -0.09
PNKP-218ENST00000625299 ATXN10Q9UBB4 475 aa14.47□□□□□ -0.09
PNKP-218ENST00000625299 MYO1AQ9UBC5 1043 aa14.47□□□□□ -0.09
PNKP-218ENST00000625299 HIVEP3Q5T1R4 2406 aa14.46□□□□□ -0.09
PNKP-218ENST00000625299 C21orf140B9A014 251 aa14.46□□□□□ -0.09
PNKP-218ENST00000625299 SORBS2O94875 1100 aaKnown RBP14.46□□□□□ -0.09
PNKP-218ENST00000625299 CCDC172P0C7W6 258 aa14.46□□□□□ -0.09
PNKP-218ENST00000625299 TCF4P15884 667 aa14.46□□□□□ -0.09
PNKP-218ENST00000625299 SLC19A1P41440 591 aa14.46□□□□□ -0.09
PNKP-218ENST00000625299 CAPZBP47756 277 aa14.46□□□□□ -0.09
PNKP-218ENST00000625299 SPINT3P49223 89 aa14.46□□□□□ -0.09
PNKP-218ENST00000625299 TUBB3Q13509 450 aa14.46□□□□□ -0.09
PNKP-218ENST00000625299 INPP5JQ15735 1006 aaPredicted RBP14.46□□□□□ -0.09
PNKP-218ENST00000625299 HENMT1Q5T8I9 393 aaKnown RBP14.46□□□□□ -0.09
PNKP-218ENST00000625299 ALS2CLQ60I27 953 aa14.46□□□□□ -0.09
PNKP-218ENST00000625299 PPP1R2P3Q6NXS1 205 aa14.46□□□□□ -0.09
PNKP-218ENST00000625299 FAM199XQ6PEV8 388 aaPredicted RBP14.46□□□□□ -0.09
PNKP-218ENST00000625299 PRSS42Q7Z5A4 293 aa14.46□□□□□ -0.09
PNKP-218ENST00000625299 ZNF653Q96CK0 615 aa14.46□□□□□ -0.09
PNKP-218ENST00000625299 MFRPQ9BY79 579 aa14.46□□□□□ -0.09
PNKP-218ENST00000625299 UCK1Q9HA47 277 aa14.46□□□□□ -0.09
PNKP-218ENST00000625299 PCDH9Q9HC56 1237 aa14.46□□□□□ -0.09
PNKP-218ENST00000625299 PDE7BQ9NP56 450 aa14.46□□□□□ -0.09
PNKP-218ENST00000625299 FANCLQ9NW38 375 aa14.46□□□□□ -0.09
PNKP-218ENST00000625299 ZNF624Q9P2J8 865 aaPredicted RBP14.46□□□□□ -0.09
PNKP-218ENST00000625299 PRRC2CQ9Y520 2896 aaKnown RBP14.46□□□□□ -0.1
PNKP-218ENST00000625299 MED13Q9UHV7 2174 aa14.46□□□□□ -0.1
PNKP-218ENST00000625299 GOLGA6L3A6NEY3 463 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 LGALS16A8MUM7 142 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 TCP11X1B4DZS4 312 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 DDAH2O95865 285 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 SLC4A1P02730 911 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 ATP1A3P13637 1013 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 XRCC1P18887 633 aaPredicted RBP14.45□□□□□ -0.1
PNKP-218ENST00000625299 CA4P22748 312 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 DCTP40126 519 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 RPS15P62841 145 aaKnown RBP14.45□□□□□ -0.1
PNKP-218ENST00000625299 IL10RAQ13651 578 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 IHHQ14623 411 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 KCNAB1Q14722 419 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 UGT8Q16880 541 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 ANKRD20A8PQ5CZ79 823 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 CT47A1Q5JQC4 288 aaPredicted RBP14.45□□□□□ -0.1
PNKP-218ENST00000625299 ZNF569Q5MCW4 686 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 PWWP2BQ6NUJ5 590 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 CYB5D1Q6P9G0 228 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 MAMDC2Q7Z304 686 aaPredicted RBP14.45□□□□□ -0.1
PNKP-218ENST00000625299 TEX26Q8N6G2 289 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 AOPEPQ8N6M6 819 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 ANKRD20A12PQ8NF67 263 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 CCHCR1Q8TD31 782 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 THAP4Q8WY91 577 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 SEC14L1Q92503 715 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 ZDHHC12Q96GR4 267 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 SPATA16Q9BXB7 569 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 SLC29A3Q9BZD2 475 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 ING2Q9H160 280 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 AKIRIN1Q9H9L7 192 aaPredicted RBP14.45□□□□□ -0.1
PNKP-218ENST00000625299 SLAMF7Q9NQ25 335 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 TRIM10Q9UDY6 481 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 SLC23A2Q9UGH3 650 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 RARRES3Q9UL19 164 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 SCINQ9Y6U3 715 aa14.45□□□□□ -0.1
PNKP-218ENST00000625299 CRYBG3Q68DQ2 2970 aa14.44□□□□□ -0.1
PNKP-218ENST00000625299 OR52A4PA6NMU1 304 aa14.44□□□□□ -0.1
PNKP-218ENST00000625299 SLC25A14O95258 325 aaPredicted RBP14.44□□□□□ -0.1
PNKP-218ENST00000625299 RECKO95980 971 aa14.44□□□□□ -0.1
PNKP-218ENST00000625299 FTLP02792 175 aaPredicted RBP14.44□□□□□ -0.1
PNKP-218ENST00000625299 RARAP10276 462 aa14.44□□□□□ -0.1
PNKP-218ENST00000625299 NELFEP18615 380 aaKnown RBP14.44□□□□□ -0.1
PNKP-218ENST00000625299 RPL10P27635 214 aaKnown RBP14.44□□□□□ -0.1
PNKP-218ENST00000625299 PCK1P35558 622 aa14.44□□□□□ -0.1
PNKP-218ENST00000625299 ZNF165P49910 485 aa14.44□□□□□ -0.1
PNKP-218ENST00000625299 PPP1CAP62136 330 aa14.44□□□□□ -0.1
PNKP-218ENST00000625299 GPR18Q14330 331 aa14.44□□□□□ -0.1
PNKP-218ENST00000625299 KRT81Q14533 505 aa14.44□□□□□ -0.1
PNKP-218ENST00000625299 CHRNA6Q15825 494 aa14.44□□□□□ -0.1
PNKP-218ENST00000625299 TXNRD3NBQ6F5E7 133 aa14.44□□□□□ -0.1
PNKP-218ENST00000625299 SYVN1Q86TM6 617 aa14.44□□□□□ -0.1
PNKP-218ENST00000625299 TTC30BQ8N4P2 665 aa14.44□□□□□ -0.1
PNKP-218ENST00000625299 SIDT2Q8NBJ9 832 aaKnown RBP14.44□□□□□ -0.1
PNKP-218ENST00000625299 KLHL6Q8WZ60 621 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms