RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 PRKAB1Q9Y478 270 aa18.38■□□□□ 0.53
CIRBP-245ENST00000621399 MAD1L1Q9Y6D9 718 aa18.38■□□□□ 0.53
CIRBP-245ENST00000621399 TMEM131Q92545 1883 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 CEP250Q9BV73 2442 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 OR51F1A6NGY5 319 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 AGAP14A8MT82 685 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 ESPNB1AK53 854 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 GPR89AB7ZAQ6 455 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 NUAK1O60285 661 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 DNAJC6O75061 913 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 ANXA6P08133 673 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 CELA2BP08218 269 aaPredicted RBP18.37■□□□□ 0.53
CIRBP-245ENST00000621399 GPR89BP0CG08 455 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 ALPPL2P10696 532 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 MSH3P20585 1137 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 NMBRP28336 390 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 AKT1P31749 480 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 GTF2H3Q13889 308 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 DEFB133Q30KQ1 61 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 KHDC1Q4VXA5 237 aaKnown RBP18.37■□□□□ 0.53
CIRBP-245ENST00000621399 PYCR3Q53H96 274 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 DNAJC21Q5F1R6 531 aaKnown RBP18.37■□□□□ 0.53
CIRBP-245ENST00000621399 DNTTIP2Q5QJE6 756 aaKnown RBP18.37■□□□□ 0.53
CIRBP-245ENST00000621399 FNBP1LQ5T0N5 605 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 AFTPHQ6ULP2 937 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 CES3Q6UWW8 571 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 MICALCLQ6ZW33 695 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 GKN2Q86XP6 184 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 NXPE1Q8N323 547 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 MMGT1Q8N4V1 131 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 DEFB124Q8NES8 71 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 LRRC1Q9BTT6 524 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 TREX1Q9NSU2 369 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 TRNAU1APQ9NX07 287 aaKnown RBP18.37■□□□□ 0.53
CIRBP-245ENST00000621399 DLL3Q9NYJ7 618 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 WHRNQ9P202 907 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 PCOLCE2Q9UKZ9 415 aa18.37■□□□□ 0.53
CIRBP-245ENST00000621399 LMO7DNF2Z398 122 aa18.36■□□□□ 0.53
CIRBP-245ENST00000621399 YY2O15391 372 aa18.36■□□□□ 0.53
CIRBP-245ENST00000621399 GRID2O43424 1007 aa18.36■□□□□ 0.53
CIRBP-245ENST00000621399 ZNF500O60304 480 aaPredicted RBP18.36■□□□□ 0.53
CIRBP-245ENST00000621399 GOT2P00505 430 aaKnown RBP18.36■□□□□ 0.53
CIRBP-245ENST00000621399 PRSS56P0CW18 603 aa18.36■□□□□ 0.53
CIRBP-245ENST00000621399 CSRP1P21291 193 aaKnown RBP18.36■□□□□ 0.53
CIRBP-245ENST00000621399 DEKP35659 375 aaKnown RBP18.36■□□□□ 0.53
CIRBP-245ENST00000621399 CDKN1CP49918 316 aaPredicted RBP18.36■□□□□ 0.53
CIRBP-245ENST00000621399 ILF3Q12906 894 aaKnown RBP eCLIP18.36■□□□□ 0.53
CIRBP-245ENST00000621399 DUPD1Q68J44 220 aa18.36■□□□□ 0.53
CIRBP-245ENST00000621399 CHST15Q7LFX5 561 aaPredicted RBP18.36■□□□□ 0.53
CIRBP-245ENST00000621399 TAF8Q7Z7C8 310 aa18.36■□□□□ 0.53
CIRBP-245ENST00000621399 SERPINA9Q86WD7 417 aa18.36■□□□□ 0.53
CIRBP-245ENST00000621399 PDIK1LQ8N165 341 aa18.36■□□□□ 0.53
CIRBP-245ENST00000621399 SDR16C5Q8N3Y7 309 aa18.36■□□□□ 0.53
CIRBP-245ENST00000621399 OR4L1Q8NH43 312 aa18.36■□□□□ 0.53
CIRBP-245ENST00000621399 CCL4L1Q8NHW4 92 aa18.36■□□□□ 0.53
CIRBP-245ENST00000621399 SCG3Q8WXD2 468 aaKnown RBP18.36■□□□□ 0.53
CIRBP-245ENST00000621399 MFSD3Q96ES6 412 aa18.36■□□□□ 0.53
CIRBP-245ENST00000621399 DCUN1D1Q96GG9 259 aa18.36■□□□□ 0.53
CIRBP-245ENST00000621399 SIGLEC10Q96LC7 697 aa18.36■□□□□ 0.53
CIRBP-245ENST00000621399 COPS8Q99627 209 aa18.36■□□□□ 0.53
CIRBP-245ENST00000621399 GSDMCQ9BYG8 508 aa18.36■□□□□ 0.53
CIRBP-245ENST00000621399 NLGN3Q9NZ94 848 aa18.36■□□□□ 0.53
CIRBP-245ENST00000621399 PCYT1BQ9Y5K3 369 aaPredicted RBP18.36■□□□□ 0.53
CIRBP-245ENST00000621399 SCN8AQ9UQD0 1980 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 FAM237BA0A1B0GVD1 139 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 DCDC2BA2VCK2 349 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 TRIM38O00635 465 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 TPP1O14773 563 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 SIGLEC6O43699 453 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 GIMD1P0DJR0 217 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 RALBP11234 206 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 PAMP19021 973 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 ARL4CP56559 192 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 CTBSQ01459 385 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 SLC7A5Q01650 507 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 DHX9Q08211 1270 aaKnown RBP18.35■□□□□ 0.53
CIRBP-245ENST00000621399 LRP8Q14114 963 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 BBS9Q3SYG4 887 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 PSAPL1Q6NUJ1 521 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 CRTC3Q6UUV7 619 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 PIANPQ8IYJ0 282 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 AGGF1Q8N302 714 aaeCLIP18.35■□□□□ 0.53
CIRBP-245ENST00000621399 RASGEF1AQ8N9B8 481 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 NOA1Q8NC60 698 aaKnown RBP18.35■□□□□ 0.53
CIRBP-245ENST00000621399 OR4C6Q8NH72 309 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 GPBAR1Q8TDU6 330 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 HEXDCQ8WVB3 486 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.35■□□□□ 0.539e-7■□□□□ 9.4
CIRBP-245ENST00000621399 STAMBPL1Q96FJ0 436 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 PWWP2AQ96N64 755 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 DUSP23Q9BVJ7 150 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 CARD6Q9BX69 1037 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 ZDHHC3Q9NYG2 299 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 PLEKHM1Q9Y4G2 1056 aa18.35■□□□□ 0.53
CIRBP-245ENST00000621399 BPTFQ12830 3046 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 TP53BP1Q12888 1972 aaPredicted RBP18.34■□□□□ 0.53
CIRBP-245ENST00000621399 TRBV5-4A0A0C4DH59 114 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 CFAP99D6REC4 459 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 CHUKO15111 745 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 TP73O15350 636 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms