RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 TIAL1Q01085 375 aaKnown RBP eCLIP9.85□□□□□ -0.83
VTA1-205ENST00000620996 DHCR24Q15392 516 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 LSM12Q3MHD2 195 aaKnown RBP9.85□□□□□ -0.83
VTA1-205ENST00000620996 PRSS36Q5K4E3 855 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 OR6Y1Q8NGX8 325 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 STAG3L4Q8TBR4 150 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 TRPC4APQ8TEL6 797 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 CNDP1Q96KN2 507 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 BIRC8Q96P09 236 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 CADM1Q9BY67 442 aaKnown RBP9.85□□□□□ -0.83
VTA1-205ENST00000620996 STN1Q9H668 368 aaKnown RBP9.85□□□□□ -0.83
VTA1-205ENST00000620996 MID1IP1Q9NPA3 183 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 IL26Q9NPH9 171 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 SEMA4BQ9NPR2 832 aaPredicted RBP9.85□□□□□ -0.83
VTA1-205ENST00000620996 DNAAF2Q9NVR5 837 aaKnown RBP9.85□□□□□ -0.83
VTA1-205ENST00000620996 ZDHHC7Q9NXF8 308 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 TAS2R1Q9NYW7 299 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 ERVW-1Q9UQF0 538 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 ATP6AP2A0A1C7CYW4 349 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 ZNF195O14628 629 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 SLC9A3R1O14745 358 aaPredicted RBP9.85□□□□□ -0.83
VTA1-205ENST00000620996 ECI2O75521 394 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 ATP6AP2O75787 350 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 ADH5P11766 374 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 EEF1DP29692 281 aaKnown RBP9.85□□□□□ -0.83
VTA1-205ENST00000620996 AKT1P31749 480 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 ST8SIA6P61647 398 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 XIAPP98170 497 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 SLC25A3Q00325 362 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 SULT2A1Q06520 285 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 TUBB3Q13509 450 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 RBBP7Q16576 425 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 ARSIQ5FYB1 569 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 PPP2R2DQ66LE6 453 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 CRTC1Q6UUV9 634 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 DDIASQ8IXT1 998 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 AHI1Q8N157 1196 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 STK40Q8N2I9 435 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 CELF5Q8N6W0 485 aaKnown RBP9.85□□□□□ -0.83
VTA1-205ENST00000620996 PCDH20Q8N6Y1 951 aaKnown RBP9.85□□□□□ -0.83
VTA1-205ENST00000620996 RBM15BQ8NDT2 890 aaKnown RBP9.85□□□□□ -0.83
VTA1-205ENST00000620996 CLPTM1LQ96KA5 538 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 NSUN5Q96P11 429 aaKnown RBP9.85□□□□□ -0.83
VTA1-205ENST00000620996 LRRC3BQ96PB8 259 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 NKX2-4Q9H2Z4 354 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 ZDHHC4Q9NPG8 344 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 BATF3Q9NR55 127 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 APPL1Q9UKG1 709 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 IKZF3Q9UKT9 509 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 HS3ST2Q9Y278 367 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 C15orf41Q9Y2V0 281 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 GRID2O43424 1007 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 HTRA2O43464 458 aaPredicted RBP9.85□□□□□ -0.83
VTA1-205ENST00000620996 IMPDH2P12268 514 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 HOXA9P31269 272 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 CA5AP35218 305 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 COPAP53621 1224 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 NFATC2Q13469 925 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 ZRSR2Q15696 482 aaKnown RBP9.85□□□□□ -0.83
VTA1-205ENST00000620996 TMEM215Q68D42 235 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 GDPD4Q6W3E5 623 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 ADIPOR2Q86V24 386 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 NKAPQ8N5F7 415 aaKnown RBP9.85□□□□□ -0.83
VTA1-205ENST00000620996 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.85□□□□□ -0.83
VTA1-205ENST00000620996 FAM13CQ8NE31 585 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 BRD9Q9H8M2 597 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 B4GALT6Q9UBX8 382 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 VTI1BQ9UEU0 232 aa9.85□□□□□ -0.83
VTA1-205ENST00000620996 CAPN14A8MX76 684 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 C5orf67F2Z3F1 127 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 GSC2O15499 205 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 MGRN1O60291 552 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 GPC4O75487 556 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 LEFTY1O75610 366 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 GUCA1CO95843 209 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 ESR1P03372 595 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 CYP17A1P05093 508 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 IMPDH1P20839 514 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 DNAJB13P59910 316 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 ZNF678Q5SXM1 525 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 SNX20Q7Z614 316 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 CACUL1Q86Y37 369 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 DCBLD1Q8N8Z6 715 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 SPATA16Q9BXB7 569 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 PRM3Q9NNZ6 103 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 TNFRSF12AQ9NP84 129 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 LATS2Q9NRM7 1088 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.84□□□□□ -0.83
VTA1-205ENST00000620996 DPPA5A6NC42 116 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 TRPC5OSA6NMA1 111 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 SLCO1B7G3V0H7 640 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 KPNA3O00505 521 aaPredicted RBP9.84□□□□□ -0.83
VTA1-205ENST00000620996 PPP6CO00743 305 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 AIM2O14862 343 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 GIPC1O14908 333 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 AHCYL1O43865 530 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 SLC25A14O95258 325 aaPredicted RBP9.84□□□□□ -0.83
VTA1-205ENST00000620996 ADH1CP00326 375 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 SLC26A3P40879 764 aa9.84□□□□□ -0.83
VTA1-205ENST00000620996 RPL26P61254 145 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms