RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 NLGN4XQ8N0W4 816 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 AADATQ8N5Z0 425 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 OR4M2Q8NGB6 313 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 FANK1Q8TC84 345 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 SLC22A8Q8TCC7 542 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 YIPF6Q96EC8 236 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 PEBP4Q96S96 227 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 SDCBP2Q9H190 292 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 TEKT2Q9UIF3 430 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 SNX5Q9Y5X3 404 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 KIAA1217Q5T5P2 1943 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 ARID2Q68CP9 1835 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 FAM149AA5PLN7 773 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 ZBBXA8MT70 800 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 A8MV72 311 aaPredicted RBP10.3□□□□□ -0.76
VPS11-207ENST00000620429 PLD2O14939 933 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 ZNF623O75123 536 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 EDN1P05305 212 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 SUPT20HL2P0C7V6 817 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 ZNF30P17039 623 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 ATP6V1B2P21281 511 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 PTX3P26022 381 aaPredicted RBP10.3□□□□□ -0.76
VPS11-207ENST00000620429 CD68P34810 354 aaPredicted RBP10.3□□□□□ -0.76
VPS11-207ENST00000620429 IL12RB1P42701 662 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 CENPAP49450 140 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 FAPQ12884 760 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 PON2Q15165 354 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 SUPT20HL1Q3ZLR7 823 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 SH3PXD2AQ5TCZ1 1133 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 ZNF704Q6ZNC4 412 aaPredicted RBP10.3□□□□□ -0.76
VPS11-207ENST00000620429 CTU1Q7Z7A3 348 aaKnown RBP10.3□□□□□ -0.76
VPS11-207ENST00000620429 PIGZQ86VD9 579 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 MPP5Q8N3R9 675 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 CPA6Q8N4T0 437 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 PJA1Q8NG27 643 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 ADAM32Q8TC27 787 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 SLC7A6Q92536 515 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 NCLNQ969V3 563 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 TESCQ96BS2 214 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 TSNARE1Q96NA8 513 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 WACQ9BTA9 647 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 SOX17Q9H6I2 414 aaPredicted RBP10.3□□□□□ -0.76
VPS11-207ENST00000620429 TLR9Q9NR96 1032 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 FAM105AQ9NUU6 356 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 COQ3Q9NZJ6 369 aa10.3□□□□□ -0.76
VPS11-207ENST00000620429 POLR2AP24928 1970 aaKnown RBP10.29□□□□□ -0.76
VPS11-207ENST00000620429 AOC2O75106 756 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 H2AFYO75367 372 aaKnown RBP10.29□□□□□ -0.76
VPS11-207ENST00000620429 ALDOAP04075 364 aaKnown RBP10.29□□□□□ -0.76
VPS11-207ENST00000620429 DNAJB1P25685 340 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 GTF2E2P29084 291 aaKnown RBP10.29□□□□□ -0.76
VPS11-207ENST00000620429 GGT5P36269 586 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 RPS5P46782 204 aaKnown RBP10.29□□□□□ -0.76
VPS11-207ENST00000620429 VBP1P61758 197 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 NKX3-2P78367 333 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 ORC1Q13415 861 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 GALEQ14376 348 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 STXBP2Q15833 593 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 ZNF699Q32M78 642 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 GPAT3Q53EU6 434 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 RAB6CQ53S08 254 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 COLEC12Q5KU26 742 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 NOL9Q5SY16 702 aaKnown RBP10.29□□□□□ -0.76
VPS11-207ENST00000620429 SEL1L3Q68CR1 1132 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 LRRC8EQ6NSJ5 796 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 C8orf82Q6P1X6 216 aaPredicted RBP10.29□□□□□ -0.76
VPS11-207ENST00000620429 ZNF517Q6ZMY9 492 aaPredicted RBP10.29□□□□□ -0.76
VPS11-207ENST00000620429 P2RY8Q86VZ1 359 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 MAGEE2Q8TD90 523 aaPredicted RBP10.29□□□□□ -0.76
VPS11-207ENST00000620429 MYRFLQ96LU7 910 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 EBNA1BP2Q99848 306 aaKnown RBP10.29□□□□□ -0.76
VPS11-207ENST00000620429 TRAF4Q9BUZ4 470 aaPredicted RBP10.29□□□□□ -0.76
VPS11-207ENST00000620429 ILKAPQ9H0C8 392 aaPredicted RBP10.29□□□□□ -0.76
VPS11-207ENST00000620429 RAB6CQ9H0N0 254 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 ELP3Q9H9T3 547 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 INTS10Q9NVR2 710 aaKnown RBP10.29□□□□□ -0.76
VPS11-207ENST00000620429 ASNSD1Q9NWL6 643 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 SLC39A1Q9NY26 324 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 CACNA2D2Q9NY47 1150 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 IPPQ9Y573 584 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 COPG1Q9Y678 874 aaKnown RBP10.29□□□□□ -0.76
VPS11-207ENST00000620429 CASP8AP2Q9UKL3 1982 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 SOWAHBA6NEL2 793 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 ZNF98A6NK75 572 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 AP3D1O14617 1153 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 MAFO75444 373 aaPredicted RBP10.29□□□□□ -0.76
VPS11-207ENST00000620429 ATG7O95352 703 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 PIGRP01833 764 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 HOXD4P09016 255 aaPredicted RBP10.29□□□□□ -0.76
VPS11-207ENST00000620429 IFI30P13284 250 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 MAGP20916 626 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 PSMA4P25789 261 aaKnown RBP10.29□□□□□ -0.76
VPS11-207ENST00000620429 HTR7P34969 479 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 TRIM23P36406 574 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 SLC12A2P55011 1212 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 TFAMQ00059 246 aaKnown RBP10.29□□□□□ -0.76
VPS11-207ENST00000620429 CDO1Q16878 200 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 ZNF404Q494X3 552 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 PIK3R6Q5UE93 754 aa10.29□□□□□ -0.76
VPS11-207ENST00000620429 PRPF38BQ5VTL8 546 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms