RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 KCNC4Q03721 635 aa9.72□□□□□ -0.85
TNFAIP3-210ENST00000620204 ATP6AP1LQ52LC2 224 aa9.72□□□□□ -0.85
TNFAIP3-210ENST00000620204 SIGIRRQ6IA17 410 aa9.72□□□□□ -0.85
TNFAIP3-210ENST00000620204 PDZD4Q76G19 769 aaPredicted RBP9.72□□□□□ -0.85
TNFAIP3-210ENST00000620204 SLC22A15Q8IZD6 547 aa9.72□□□□□ -0.85
TNFAIP3-210ENST00000620204 DEFB106AQ8N104 65 aa9.72□□□□□ -0.85
TNFAIP3-210ENST00000620204 C1orf127Q8N9H9 656 aa9.72□□□□□ -0.85
TNFAIP3-210ENST00000620204 MTMR14Q8NCE2 650 aa9.72□□□□□ -0.85
TNFAIP3-210ENST00000620204 STON2Q8WXE9 905 aa9.72□□□□□ -0.85
TNFAIP3-210ENST00000620204 TRIM63Q969Q1 353 aa9.72□□□□□ -0.85
TNFAIP3-210ENST00000620204 ZNF641Q96N77 438 aaPredicted RBP9.72□□□□□ -0.85
TNFAIP3-210ENST00000620204 ZC4H2Q9NQZ6 224 aa9.72□□□□□ -0.85
TNFAIP3-210ENST00000620204 ERVK13-1Q9NX77 482 aa9.72□□□□□ -0.85
TNFAIP3-210ENST00000620204 GMIPQ9P107 970 aa9.72□□□□□ -0.85
TNFAIP3-210ENST00000620204 SLC2A6Q9UGQ3 507 aa9.72□□□□□ -0.85
TNFAIP3-210ENST00000620204 LACTBL1A8MY62 500 aa9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 CENPBD1B2RD01 187 aa9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 HCRTO43612 131 aa9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 ATG7O95352 703 aa9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 CPNE6O95741 557 aa9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 ALDOCP09972 364 aaKnown RBP9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 ALDH3A2P51648 485 aa9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 PLA2G4EQ3MJ16 856 aa9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 TBRG1Q3YBR2 411 aa9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 GTF2IRD2BQ6EKJ0 949 aa9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 FAM45BPQ6NSW5 357 aa9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 PRMT9Q6P2P2 845 aa9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 GTF2IRD2Q86UP8 949 aa9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 GALNT13Q8IUC8 556 aa9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 LYSMD2Q8IV50 215 aa9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 SVOPQ8N4V2 548 aa9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 RHOXF1Q8NHV9 184 aa9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 FAM45AQ8TCE6 357 aa9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 GIPC2Q8TF65 315 aa9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 ESAMQ96AP7 390 aa9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 ROPN1LQ96C74 230 aa9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 UHRF1Q96T88 793 aaPredicted RBP9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 CPNE5Q9HCH3 593 aa9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 FAM118AQ9NWS6 357 aa9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 SNX6Q9UNH7 406 aa9.71□□□□□ -0.85
TNFAIP3-210ENST00000620204 AP3D1O14617 1153 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 TNFRSF21O75509 655 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 UPK1BO75841 260 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 TXNP10599 105 aaKnown RBP9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 CPB1P15086 417 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 ARNTP27540 789 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 GGT5P36269 586 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 MAGEA6P43360 314 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 GP2P55259 537 aaKnown RBP9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 PITX1P78337 314 aaPredicted RBP9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 CCDC85BQ15834 202 aaPredicted RBP9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 RBM48Q5RL73 367 aaKnown RBP9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 TPRG1LQ5T0D9 272 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 TXNDC11Q6PKC3 985 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 LYPD8Q6UX82 237 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 REM2Q8IYK8 340 aaPredicted RBP9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 CHDHQ8NE62 594 aaPredicted RBP9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 LPAR1Q92633 364 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 GPR22Q99680 433 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 KCNS3Q9BQ31 491 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 OR2B2Q9GZK3 357 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 ZBTB20Q9HC78 741 aaPredicted RBP9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 MAT2BQ9NZL9 334 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 ASB14A6NK59 587 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 LOC110117498-PIK3R3F6TDL0 507 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 SLC1A7O00341 560 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 AIREO43918 545 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 SSX4O60224 188 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 CILPO75339 1184 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 LCKP06239 509 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 LBPP18428 481 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 ATF4P18848 351 aaPredicted RBP9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 CTF1Q16619 201 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 ATAD3CQ5T2N8 411 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 GPR158Q5T848 1215 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 ERAP2Q6P179 960 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 CYS1Q717R9 158 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 SLC26A9Q7LBE3 791 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 STRADAQ7RTN6 431 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 HORMAD1Q86X24 394 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 PTGR2Q8N8N7 351 aaPredicted RBP9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 CLEC4DQ8WXI8 215 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 KLRG1Q96E93 195 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 MYOCQ99972 504 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 CHCHD6Q9BRQ6 235 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 RHNO1Q9BSD3 238 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 FICDQ9BVA6 458 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 ZNF385DQ9H6B1 395 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 THG1LQ9NWX6 298 aaKnown RBP9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 DNMT3BQ9UBC3 853 aaKnown RBP9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 FBXO5Q9UKT4 447 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 KLHL20Q9Y2M5 609 aa9.71□□□□□ -0.86
TNFAIP3-210ENST00000620204 KMOO15229 486 aa9.7□□□□□ -0.86
TNFAIP3-210ENST00000620204 HOXC6P09630 235 aa9.7□□□□□ -0.86
TNFAIP3-210ENST00000620204 SNX16P57768 344 aa9.7□□□□□ -0.86
TNFAIP3-210ENST00000620204 SMN1Q16637 294 aaKnown RBP9.7□□□□□ -0.86
TNFAIP3-210ENST00000620204 SOWAHAQ2M3V2 549 aa9.7□□□□□ -0.86
TNFAIP3-210ENST00000620204 ZNF404Q494X3 552 aa9.7□□□□□ -0.86
TNFAIP3-210ENST00000620204 SLC16A12Q6ZSM3 486 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms