RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 MKRN2Q9H000 416 aaKnown RBP14.93□□□□□ -0.02
COL5A1-208ENST00000618395 FRMPD4Q14CM0 1322 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.93□□□□□ -0.02
COL5A1-208ENST00000618395 ZNF177Q13360 481 aaPredicted RBP14.93□□□□□ -0.02
COL5A1-208ENST00000618395 CRY1Q16526 586 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 ZFP28Q8NHY6 868 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 TBL1YQ9BQ87 522 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 PBDC1Q9BVG4 233 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 MMP27Q9H306 513 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 USP29Q9HBJ7 922 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 HTRA4P83105 476 aaPredicted RBP14.93□□□□□ -0.02
COL5A1-208ENST00000618395 CES3Q6UWW8 571 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 OR2L8Q8NGY9 312 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 SLC41A3Q96GZ6 507 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 SMURF2Q9HAU4 748 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 KNL1Q8NG31 2342 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 ATP7BP35670 1465 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 TRAV6A0A075B6T7 132 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 APOC4-APOC2K7ER74 178 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 ENTPD6O75354 484 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 RFPL2O75678 378 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 RAD17O75943 681 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 GJB6O95452 261 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 SLC16A8O95907 504 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 APOC2P02655 101 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 PPP5CP53041 499 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 RAB10P61026 200 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 CRY2Q49AN0 593 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 NKAPLQ5M9Q1 402 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 SPATA22Q8NHS9 363 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 TBX20Q9UMR3 447 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 F8W036 122 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 TNFRSF11BO00300 401 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 ITGA10O75578 1167 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 GH1P01241 217 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 DCKP27707 260 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 CD6P30203 668 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 BLOC1S1P78537 153 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 ANXA8L1Q5VT79 327 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 UBQLNLQ8IYU4 475 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 PANX3Q96QZ0 392 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 MCMBPQ9BTE3 642 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 TIMM8BQ9Y5J9 83 aaPredicted RBP14.93□□□□□ -0.02
COL5A1-208ENST00000618395 ITSN1Q15811 1721 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 OVOS2A0A0G2JMS6 1433 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 RIIAD1A6NNX1 92 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 ZNF705GA8MUZ8 300 aaPredicted RBP14.93□□□□□ -0.02
COL5A1-208ENST00000618395 SLC7A1P30825 629 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 CAPZA1P52907 286 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 PRKCDQ05655 676 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 GFOD2Q3B7J2 385 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 ARSKQ6UWY0 536 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 ILDR2Q71H61 639 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 GPR180Q86V85 440 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 RXFP2Q8WXD0 754 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 UBE2E3Q969T4 207 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 TMEM159Q96B96 161 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 C3orf14Q9HBI5 128 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 ARL15Q9NXU5 204 aa14.93□□□□□ -0.02
COL5A1-208ENST00000618395 A0A0J9YVX5 310 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 ZNF705FA8MVS1 300 aaPredicted RBP14.92□□□□□ -0.02
COL5A1-208ENST00000618395 ATP6V1G2-DDX39BF2Z307 99 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 LINC00032P0C843 101 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 ZNF705DP0CH99 300 aaPredicted RBP14.92□□□□□ -0.02
COL5A1-208ENST00000618395 ZNF705BP0CI00 300 aaPredicted RBP14.92□□□□□ -0.02
COL5A1-208ENST00000618395 MAGEA11P43364 429 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 CDH11P55287 796 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 CTBP2P56545 445 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 TLE2Q04725 743 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 FAM83HQ6ZRV2 1179 aaPredicted RBP14.92□□□□□ -0.02
COL5A1-208ENST00000618395 LPGAT1Q92604 370 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 UNC93B1Q9H1C4 597 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 CHD5Q8TDI0 1954 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 BHMG1C9JSJ3 638 aaPredicted RBP14.92□□□□□ -0.02
COL5A1-208ENST00000618395 ZBTB14O43829 449 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 BBOX1O75936 387 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 SCGB1D2O95969 90 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 PAK4O96013 591 aaPredicted RBP14.92□□□□□ -0.02
COL5A1-208ENST00000618395 PBLDP30039 288 aaPredicted RBP14.92□□□□□ -0.02
COL5A1-208ENST00000618395 MPP7Q5T2T1 576 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 ANGEL2Q5VTE6 544 aaKnown RBP14.92□□□□□ -0.02
COL5A1-208ENST00000618395 GK5Q6ZS86 529 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 PIGWQ7Z7B1 504 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 STK35Q8TDR2 534 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 POLE4Q9NR33 117 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 PALLDQ8WX93 1383 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 XPNPEP2O43895 674 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 TYMPP19971 482 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 CRHR1P34998 444 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 OR3A3P47888 321 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 OR3A2P47893 321 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 MEA1Q16626 185 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 KCNV1Q6PIU1 500 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 FAM198BQ6UWH4 519 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 PSD2Q9BQI7 771 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 ITPAQ9BY32 194 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 TCF7L1Q9HCS4 588 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 ACTR10Q9NZ32 417 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 GNG13Q9P2W3 67 aa14.92□□□□□ -0.02
COL5A1-208ENST00000618395 RENBPP51606 427 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms