RNA–Protein interactions for RNA: ENST00000617087.1

PVT1-225, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 130 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-225	ENST00000617087	DUS1L	Q6P1R4	473 aa	Known RBP	5.5	□□□□□ -1.53
PVT1-225	ENST00000617087	C11orf88	Q6PI97	169 aa		5.5	□□□□□ -1.53
PVT1-225	ENST00000617087	ZC3HC1	Q86WB0	502 aa	Known RBP	5.5	□□□□□ -1.53
PVT1-225	ENST00000617087	SNX32	Q86XE0	403 aa		5.5	□□□□□ -1.53
PVT1-225	ENST00000617087	SLC38A9	Q8NBW4	561 aa		5.5	□□□□□ -1.53
PVT1-225	ENST00000617087	CAMKV	Q8NCB2	501 aa		5.5	□□□□□ -1.53
PVT1-225	ENST00000617087	C7orf57	Q8NEG2	295 aa		5.5	□□□□□ -1.53
PVT1-225	ENST00000617087	TAAR8	Q969N4	342 aa		5.5	□□□□□ -1.53
PVT1-225	ENST00000617087	ORAI1	Q96D31	301 aa		5.5	□□□□□ -1.53
PVT1-225	ENST00000617087	SPACA9	Q96E40	222 aa	Predicted RBP	5.5	□□□□□ -1.53
PVT1-225	ENST00000617087	NEK1	Q96PY6	1258 aa		5.5	□□□□□ -1.53
PVT1-225	ENST00000617087	SPAG5	Q96R06	1193 aa		5.5	□□□□□ -1.53
PVT1-225	ENST00000617087	GPATCH1	Q9BRR8	931 aa	Known RBP	5.5	□□□□□ -1.53
PVT1-225	ENST00000617087	SPRY4	Q9C004	299 aa		5.5	□□□□□ -1.53
PVT1-225	ENST00000617087	FAM234A	Q9H0X4	552 aa		5.5	□□□□□ -1.53
PVT1-225	ENST00000617087	RAD21L1	Q9H4I0	556 aa		5.5	□□□□□ -1.53
PVT1-225	ENST00000617087	NOL11	Q9H8H0	719 aa	Known RBP	5.5	□□□□□ -1.53
PVT1-225	ENST00000617087	CHMP1A	Q9HD42	196 aa	Predicted RBP	5.5	□□□□□ -1.53
PVT1-225	ENST00000617087	KRCC1	Q9NPI7	259 aa	Predicted RBP	5.5	□□□□□ -1.53
PVT1-225	ENST00000617087	TINAG	Q9UJW2	476 aa		5.5	□□□□□ -1.53
PVT1-225	ENST00000617087	LIPG	Q9Y5X9	500 aa		5.5	□□□□□ -1.53
PVT1-225	ENST00000617087	WDR33	Q9C0J8	1336 aa	Known RBP	5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	WDR46	O15213	610 aa	Known RBP	5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	SPINT2	O43291	252 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	PRAMEF11	O60813	436 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	ZNF217	O75362	1048 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	FSHB	P01225	129 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	LCAT	P04180	440 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	LINGO3	P0C6S8	592 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	PFKFB1	P16118	471 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	KEL	P23276	732 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	MCC	P23508	829 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	HRH2	P25021	359 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	NMBR	P28336	390 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	TLX1	P31314	330 aa	Predicted RBP	5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	STX2	P32856	288 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	KRT2	P35908	639 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	NPY4R	P50391	375 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	HNRNPH2	P55795	449 aa	Known RBP	5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	FOXM1	Q08050	763 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	HNF4G	Q14541	408 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	ZNF273	Q14593	569 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	SYT16	Q17RD7	645 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	CAVIN1	Q6NZI2	390 aa	Known RBP	5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	KCTD18	Q6PI47	426 aa	Predicted RBP	5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	PET117	Q6UWS5	81 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	IRF2BP2	Q7Z5L9	587 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	ZNF595	Q8IYB9	648 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	FBXO39	Q8N4B4	442 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	ARFGAP1	Q8N6T3	406 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	MIGA1	Q8NAN2	632 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	SETD6	Q8TBK2	473 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	RND1	Q92730	232 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	ABHD6	Q9BV23	337 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	THUMPD3	Q9BV44	507 aa	Known RBP	5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	C2orf40	Q9H1Z8	148 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	CNOT10	Q9H9A5	744 aa	Known RBP	5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	C17orf75	Q9HAS0	396 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	PLAC1	Q9HBJ0	212 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	PAM16	Q9Y3D7	125 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	HS3ST3B1	Q9Y662	390 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	TAF1	P21675	1872 aa		5.49	□□□□□ -1.53
PVT1-225	ENST00000617087	CKAP5	Q14008	2032 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	IGHV4-28	A0A0C4DH34	117 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	BECN2	A8MW95	431 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	FAM90A26	D6RGX4	464 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	CCDC188	H7C350	402 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	KCNN4	O15554	427 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	NDUFS4	O43181	175 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	SYNCRIP	O60506	623 aa	Known RBP	5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	NDUFS7	O75251	213 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	TOMM70	O94826	608 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	CYP1A2	P05177	515 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	TNFRSF1B	P20333	461 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	ACHE	P22303	614 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	DNASE1	P24855	282 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	ATP5D	P30049	168 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	BDKRB2	P30411	391 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	HOXC13	P31276	330 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	RPL3	P39023	403 aa	Known RBP	5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	PPIG	Q13427	754 aa	Known RBP eCLIP	5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	PTGR1	Q14914	329 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	RBMS2	Q15434	407 aa	Known RBP	5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	ASIC2	Q16515	512 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	MEP1A	Q16819	746 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	ODF3L2	Q3SX64	289 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	MPP7	Q5T2T1	576 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	SHQ1	Q6PI26	577 aa	Known RBP	5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	SLC36A4	Q6YBV0	504 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	CENPV	Q7Z7K6	275 aa	Predicted RBP	5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	IQCA1	Q86XH1	822 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	MAML2	Q8IZL2	1156 aa	Predicted RBP	5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	PCDH20	Q8N6Y1	951 aa	Known RBP	5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	ZNF713	Q8N859	430 aa	Predicted RBP	5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	SMC6	Q96SB8	1091 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	KXD1	Q9BQD3	176 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	TMEM79	Q9BSE2	394 aa		5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	MMTAG2	Q9BU76	263 aa	Known RBP	5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	PRMT7	Q9NVM4	692 aa	Predicted RBP	5.48	□□□□□ -1.53
PVT1-225	ENST00000617087	TRAV34	A0A0B4J273	112 aa		5.47	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms