RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 TAB1Q15750 504 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 CELF5Q8N6W0 485 aaKnown RBP14.63□□□□□ -0.07
SNPH-203ENST00000614659 LMO3Q8TAP4 145 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 USP7Q93009 1102 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 SUSD3Q96L08 255 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 GATA5Q9BWX5 397 aaPredicted RBP14.63□□□□□ -0.07
SNPH-203ENST00000614659 C1orf21Q9H246 121 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 GOLGA2P5Q9HBQ8 144 aa14.63□□□□□ -0.07
SNPH-203ENST00000614659 NPEPPSL1A6NEC2 478 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 KCNU1A8MYU2 1149 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 AP1S1P61966 158 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 LSM12Q3MHD2 195 aaKnown RBP14.62□□□□□ -0.07
SNPH-203ENST00000614659 TRIM40Q6P9F5 258 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 AMER2Q8N7J2 671 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 DEPDC7Q96QD5 511 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 MAFFQ9ULX9 164 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 UBXN8O00124 270 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 CAPN1P07384 714 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 AKT2P31751 481 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 NR1D2Q14995 579 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 PPM1JQ5JR12 505 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 FGD3Q5JSP0 725 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 KHDRBS2Q5VWX1 349 aaKnown RBP14.62□□□□□ -0.07
SNPH-203ENST00000614659 RHBDF2Q6PJF5 856 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 KLHL17Q6TDP4 642 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 GCNT7Q6ZNI0 430 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 SIAH1Q8IUQ4 282 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 OR2T12Q8NG77 320 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 HERVK_113Q902F9 699 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 RNFT2Q96EX2 444 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 KLHL5Q96PQ7 755 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 TM6SF2Q9BZW4 377 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 POLR1BQ9H9Y6 1135 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 CAPN10Q9HC96 672 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 ATXN10Q9UBB4 475 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 NRP1O14786 923 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 BUD23O43709 281 aaKnown RBP14.62□□□□□ -0.07
SNPH-203ENST00000614659 CBFA2T3O75081 653 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 POP4O95707 220 aaKnown RBP14.62□□□□□ -0.07
SNPH-203ENST00000614659 GNPDA1P46926 289 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 SLC5A9Q2M3M2 681 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 NCBP2-AS2Q69YL0 99 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 FAM92BQ6ZTR7 304 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 CCDC80Q76M96 950 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 HIPK1Q86Z02 1210 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 ZBTB2Q8N680 514 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 UBASH3BQ8TF42 649 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 CLP1Q92989 425 aaKnown RBP14.62□□□□□ -0.07
SNPH-203ENST00000614659 OR52E6Q96RD3 313 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 GDAP2Q9NXN4 497 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 POLR3HQ9Y535 204 aaPredicted RBP14.62□□□□□ -0.07
SNPH-203ENST00000614659 IL1R2P27930 398 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 HSPA14Q0VDF9 509 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 SPATA6LQ8N4H0 392 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 ASZ1Q8WWH4 475 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 TOP1MTQ969P6 601 aa14.62□□□□□ -0.07
SNPH-203ENST00000614659 IRGMA1A4Y4 181 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 PTGES3LE9PB15 166 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 C1RP00736 705 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 LYNP07948 512 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 NMBRP28336 390 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 CRATP43155 626 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 ASMTP46597 345 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 ZNHIT3Q15649 155 aaPredicted RBP14.61□□□□□ -0.07
SNPH-203ENST00000614659 SPESP1Q6UW49 350 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 C6orf89Q6UWU4 347 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 MAMDC4Q6UXC1 1216 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 AVL9Q8NBF6 648 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 PNPT1Q8TCS8 783 aaKnown RBP14.61□□□□□ -0.07
SNPH-203ENST00000614659 BPIFA1Q9NP55 256 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 IFT80Q9P2H3 777 aaPredicted RBP14.61□□□□□ -0.07
SNPH-203ENST00000614659 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.61□□□□□ -0.07
SNPH-203ENST00000614659 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.61□□□□□ -0.07
SNPH-203ENST00000614659 RFXANKO14593 260 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 MSI1O43347 362 aaKnown RBP14.61□□□□□ -0.07
SNPH-203ENST00000614659 SYN1P17600 705 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 JAK1P23458 1154 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 UBXN2BQ14CS0 331 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 SOWAHAQ2M3V2 549 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 TYW3Q6IPR3 259 aaKnown RBP14.61□□□□□ -0.07
SNPH-203ENST00000614659 ZNF781Q8N8C0 355 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 BRSK1Q8TDC3 778 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 HHIPL1Q96JK4 782 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 TRMT61BQ9BVS5 477 aaKnown RBP14.61□□□□□ -0.07
SNPH-203ENST00000614659 ELAC1Q9H777 363 aaKnown RBP14.61□□□□□ -0.07
SNPH-203ENST00000614659 PTPRHQ9HD43 1115 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 NDRG2Q9UN36 371 aaKnown RBP14.61□□□□□ -0.07
SNPH-203ENST00000614659 G3V2T6 193 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 NDUFB5O43674 189 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 SCELO95171 688 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 PGM3O95394 542 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 GSTM5P46439 218 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 PSMD8P48556 350 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 CLCQ05315 142 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 TAF1AQ15573 450 aaPredicted RBP14.61□□□□□ -0.07
SNPH-203ENST00000614659 XKR6Q5GH73 641 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 DGKKQ5KSL6 1271 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 EOGTQ5NDL2 527 aa14.61□□□□□ -0.07
SNPH-203ENST00000614659 ZNF57Q68EA5 555 aaPredicted RBP14.61□□□□□ -0.07
SNPH-203ENST00000614659 OLFML1Q6UWY5 402 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms