RNA–Protein interactions for RNA: ENST00000614197.4

NPIPB4-222, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-222	ENST00000614197	ASPSCR1	Q9BZE9	553 aa		10.84	□□□□□ -0.67
NPIPB4-222	ENST00000614197	B3GNT4	Q9C0J1	378 aa		10.84	□□□□□ -0.67
NPIPB4-222	ENST00000614197	GOLPH3	Q9H4A6	298 aa		10.84	□□□□□ -0.67
NPIPB4-222	ENST00000614197	ATXN10	Q9UBB4	475 aa		10.84	□□□□□ -0.67
NPIPB4-222	ENST00000614197	CNOT6	Q9ULM6	557 aa	Known RBP	10.84	□□□□□ -0.67
NPIPB4-222	ENST00000614197	EFR3B	Q9Y2G0	817 aa		10.84	□□□□□ -0.67
NPIPB4-222	ENST00000614197	AAR2	Q9Y312	384 aa	Known RBP	10.84	□□□□□ -0.67
NPIPB4-222	ENST00000614197	OAS3	Q9Y6K5	1087 aa	Known RBP	10.84	□□□□□ -0.67
NPIPB4-222	ENST00000614197	CHD6	Q8TD26	2715 aa		10.84	□□□□□ -0.67
NPIPB4-222	ENST00000614197	CACNA1G	O43497	2377 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	IGHV5-10-1	A0A0J9YXX1	117 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	PMS2P1	A4D2B8	440 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	GOLGA6L3	A6NEY3	463 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	SOWAHD	A6NJG2	315 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	CASC3	O15234	703 aa	Known RBP	10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	STX7	O15400	261 aa	Known RBP	10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	PPFIA2	O75334	1257 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	VIP	P01282	170 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	HOXB3	P14651	431 aa	Predicted RBP	10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	ZNF8	P17098	575 aa	Predicted RBP	10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	BPI	P17213	487 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	IDS	P22304	550 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	HMGCL	P35914	325 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	SPAM1	P38567	509 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	EPHA4	P54764	986 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	RAB15	P59190	212 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	WASHC5	Q12768	1159 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	KIF5A	Q12840	1032 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	CLN3	Q13286	438 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	SQSTM1	Q13501	440 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	ITGA9	Q13797	1035 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	SNAP47	Q5SQN1	464 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	NKAIN2	Q5VXU1	208 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	TMEM71	Q6P5X7	295 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	DARS2	Q6PI48	645 aa	Known RBP	10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	FAM129C	Q86XR2	697 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	TRAPPC5	Q8IUR0	188 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	NCSTN	Q92542	709 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	TADA1	Q96BN2	335 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	WDR24	Q96S15	920 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	TIMM29	Q9BSF4	260 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	OSBPL8	Q9BZF1	889 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	BPIFA1	Q9NP55	256 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	ARFGAP3	Q9NP61	516 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	KLC4	Q9NSK0	619 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	CPNE7	Q9UBL6	633 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	TBC1D29	Q9UFV1	150 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	ACSL6	Q9UKU0	697 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	PCDHA3	Q9Y5H8	950 aa		10.83	□□□□□ -0.68
NPIPB4-222	ENST00000614197	ANKRD36	A6QL64	1941 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	PRAMEF33	A0A0G2JMD5	474 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	GLYATL1P3	A0A0U1RQE8	302 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	C2orf81	A6NN90	581 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197		F5H423	210 aa	Predicted RBP	10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	STMND1	H3BQB6	276 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197		K7ENP7	123 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	PRAMEF10	O60809	474 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	KCNJ13	O60928	360 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	ZNF7	P17097	686 aa	Predicted RBP	10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	AMD1	P17707	334 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	CTNNA1	P35221	906 aa	Known RBP	10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	CLCNKA	P51800	687 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	EIF3E	P60228	445 aa	Known RBP	10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	PDE1B	Q01064	536 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	C16orf72	Q14CZ0	275 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	NOMO1	Q15155	1222 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	PLA2G4E	Q3MJ16	856 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	SIRPB2	Q5JXA9	342 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	LDLRAP1	Q5SW96	308 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	DCAF12	Q5T6F0	453 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	INO80C	Q6PI98	192 aa	Predicted RBP	10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	WDR74	Q6RFH5	385 aa	Predicted RBP	10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	PEX26	Q7Z412	305 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	ADGRG6	Q86SQ4	1221 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	ZNF761	Q86XN6	746 aa	Predicted RBP	10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	PLXDC1	Q8IUK5	500 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	RBM12B	Q8IXT5	1001 aa	Known RBP	10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	ZNF567	Q8N184	647 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	TTC13	Q8NBP0	860 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	RCBTB1	Q8NDN9	531 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	KRT35	Q92764	455 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	CXorf40B	Q96DE9	158 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	WBP1	Q96G27	269 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	TEFM	Q96QE5	360 aa	Known RBP	10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	VPS35	Q96QK1	796 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	BAG1	Q99933	345 aa	Predicted RBP	10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	ARHGAP9	Q9BRR9	750 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	SLC39A1	Q9NY26	324 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	AMFR	Q9UKV5	643 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	DNAJC16	Q9Y2G8	782 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	SHROOM3	Q8TF72	1996 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	MYLK	Q15746	1914 aa		10.82	□□□□□ -0.68
NPIPB4-222	ENST00000614197	LRRK1	Q38SD2	2015 aa		10.81	□□□□□ -0.68
NPIPB4-222	ENST00000614197	LOC285095	A0A1B0GVY8	99 aa		10.81	□□□□□ -0.68
NPIPB4-222	ENST00000614197	EFCAB7	A8K855	629 aa		10.81	□□□□□ -0.68
NPIPB4-222	ENST00000614197		A8MU76	341 aa		10.81	□□□□□ -0.68
NPIPB4-222	ENST00000614197	BTNL10	A8MVZ5	291 aa		10.81	□□□□□ -0.68
NPIPB4-222	ENST00000614197	KCNN4	O15554	427 aa		10.81	□□□□□ -0.68
NPIPB4-222	ENST00000614197	CRTAM	O95727	393 aa		10.81	□□□□□ -0.68
NPIPB4-222	ENST00000614197	RBP3	P10745	1247 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms