RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 IGLV3-16A0A075B6K0 115 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 A0A1W2PR77 199 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 CXorf49A8MYA2 514 aaPredicted RBP14.55□□□□□ -0.08
CD48-203ENST00000613788 GPR89AB7ZAQ6 455 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 F8W8V4 182 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 S1PR4O95977 384 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 C1QAP02745 245 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 GPR89BP0CG08 455 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 CA5AP35218 305 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 HOXD12P35452 270 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 LEPRP48357 1165 aaKnown RBP14.55□□□□□ -0.08
CD48-203ENST00000613788 TCF15Q12870 199 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 GTF2H3Q13889 308 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 NFATC4Q14934 902 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 UAP1Q16222 522 aaPredicted RBP14.55□□□□□ -0.08
CD48-203ENST00000613788 PACS1Q6VY07 963 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 MICALCLQ6ZW33 695 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 MARK2Q7KZI7 788 aaKnown RBP14.55□□□□□ -0.08
CD48-203ENST00000613788 RABEPKQ7Z6M1 372 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 STRA8Q7Z7C7 330 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 ABCA7Q8IZY2 2146 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 PRSS33Q8NF86 280 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 OR13H1Q8NG92 308 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 PIGKQ92643 395 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 CPNE1Q99829 537 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 CLPBQ9H078 707 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 SMYD2Q9NRG4 433 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 VPS18Q9P253 973 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 IKBKGQ9Y6K9 419 aa14.55□□□□□ -0.08
CD48-203ENST00000613788 ZNF106Q9H2Y7 1883 aaKnown RBP14.54□□□□□ -0.08
CD48-203ENST00000613788 EXOC1LA0A1B0GW35 172 aa14.54□□□□□ -0.08
CD48-203ENST00000613788 UBA6A0AVT1 1052 aaPredicted RBP14.54□□□□□ -0.08
CD48-203ENST00000613788 TLR4O00206 839 aa14.54□□□□□ -0.08
CD48-203ENST00000613788 QSOX1O00391 747 aa14.54□□□□□ -0.08
CD48-203ENST00000613788 PRMT5O14744 637 aaPredicted RBP14.54□□□□□ -0.08
CD48-203ENST00000613788 VILLO15195 856 aa14.54□□□□□ -0.08
CD48-203ENST00000613788 CDK14O94921 469 aa14.54□□□□□ -0.08
CD48-203ENST00000613788 AHSGP02765 367 aa14.54□□□□□ -0.08
CD48-203ENST00000613788 ATP1B2P14415 290 aaPredicted RBP14.54□□□□□ -0.08
CD48-203ENST00000613788 H2AFXP16104 143 aaPredicted RBP14.54□□□□□ -0.08
CD48-203ENST00000613788 ADARP55265 1226 aaKnown RBP14.54□□□□□ -0.08
CD48-203ENST00000613788 PDE1CQ14123 709 aaPredicted RBP14.54□□□□□ -0.08
CD48-203ENST00000613788 KDM7AQ6ZMT4 941 aa14.54□□□□□ -0.08
CD48-203ENST00000613788 TRIM74Q86UV6 250 aa14.54□□□□□ -0.08
CD48-203ENST00000613788 CEP76Q8TAP6 659 aa14.54□□□□□ -0.08
CD48-203ENST00000613788 ZNF514Q96K75 400 aaPredicted RBP14.54□□□□□ -0.08
CD48-203ENST00000613788 WDR92Q96MX6 357 aa14.54□□□□□ -0.08
CD48-203ENST00000613788 FBXO6Q9NRD1 293 aaPredicted RBP14.54□□□□□ -0.08
CD48-203ENST00000613788 FETUBQ9UGM5 382 aa14.54□□□□□ -0.08
CD48-203ENST00000613788 TMEM98Q9Y2Y6 226 aa14.54□□□□□ -0.08
CD48-203ENST00000613788 SLCO1B1Q9Y6L6 691 aa14.54□□□□□ -0.08
CD48-203ENST00000613788 BPTFQ12830 3046 aa14.54□□□□□ -0.08
CD48-203ENST00000613788 POC1B-GALNT4F8VUJ3 575 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 TNFRSF10CO14798 259 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 MTX2O75431 263 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 PIAS1O75925 651 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 HAUS5O94927 633 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 AP2A2O94973 939 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 NUDT17P0C025 328 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 GP5P40197 560 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 MSH2P43246 934 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 CD151P48509 253 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 CSNK1EP49674 416 aaKnown RBP14.53□□□□□ -0.08
CD48-203ENST00000613788 CSE1LP55060 971 aaKnown RBP14.53□□□□□ -0.08
CD48-203ENST00000613788 C21orf59P57076 290 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 MPP1Q00013 466 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 ZNF648Q5T619 568 aaPredicted RBP14.53□□□□□ -0.08
CD48-203ENST00000613788 GRTP1Q5TC63 336 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 PEAR1Q5VY43 1037 aaPredicted RBP14.53□□□□□ -0.08
CD48-203ENST00000613788 DOK6Q6PKX4 331 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 ENPP7Q6UWV6 458 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 MACC1Q6ZN28 852 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 ADGRG6Q86SQ4 1221 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 CNPY4Q8N129 248 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 PNPLA1Q8N8W4 532 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 OR56A4Q8NGH8 313 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 LPGAT1Q92604 370 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 BOCQ9BWV1 1114 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 OR2AG1Q9H205 316 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 CCDC68Q9H2F9 335 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 RMI1Q9H9A7 625 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 PPCSQ9HAB8 311 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 GPR27Q9NS67 375 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 TMEM74BQ9NUR3 256 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 ATXN10Q9UBB4 475 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 SLC17A4Q9Y2C5 497 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 CRYL1Q9Y2S2 319 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 PCDHB1Q9Y5F3 818 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 OAS3Q9Y6K5 1087 aaKnown RBP14.53□□□□□ -0.08
CD48-203ENST00000613788 ZNF318Q5VUA4 2279 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 THADAQ6YHU6 1953 aa14.53□□□□□ -0.08
CD48-203ENST00000613788 DOCK9Q9BZ29 2069 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 SPTY2D1-AS1A0A0U1RR47 76 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 TMEM202A6NGA9 273 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 OR1I1O60431 355 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 ESR1P03372 595 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 WNT1P04628 370 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 CEACAM5P06731 702 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 IVLP07476 585 aa14.52□□□□□ -0.08
CD48-203ENST00000613788 INHBAP08476 426 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms