RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 LYNP07948 512 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 MPSTP25325 297 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 CXCL17Q6UXB2 119 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 KIAA1324Q6UXG2 1013 aaKnown RBP17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 ZZZ3Q8IYH5 903 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 PIK3R3Q92569 461 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 CLPTM1LQ96KA5 538 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 RASSF1Q9NS23 344 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 CNTNAP1P78357 1384 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 TMEM131LA2VDJ0 1609 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 MATN2O00339 956 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 PRMT3O60678 531 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 VBP1P61758 197 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 UNC5BQ8IZJ1 945 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 HTRA1Q92743 480 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 COPS5Q92905 334 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 CENPNQ96H22 339 aaPredicted RBP17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 KREMEN1Q96MU8 473 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 CLCC1Q96S66 551 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 SLC25A51Q9H1U9 297 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 RSPH9Q9H1X1 276 aaPredicted RBP17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 LAG3P18627 525 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 MNDAP41218 407 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 MAXP61244 160 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 DLG1Q12959 904 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 USP4Q13107 963 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 ATXN7L2Q5T6C5 722 aaPredicted RBP17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 CMC1Q7Z7K0 106 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 NIFKQ9BYG3 293 aaKnown RBP17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 IL1RAPQ9NPH3 570 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 TCAF1Q9Y4C2 921 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 PEX16Q9Y5Y5 336 aa17.3■□□□□ 0.36
HMGXB3-206ENST00000613459 KERAO60938 352 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 ZBTB11O95625 1053 aaPredicted RBP17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 FESP07332 822 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 GJA8P48165 433 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 RAB15P59190 212 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 ITGA7Q13683 1181 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 EEF1DP3Q658K8 133 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 SCIMPQ6UWF3 145 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 BTN2A1Q7KYR7 527 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 C4orf32Q8N8J7 132 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 KBTBD7Q8WVZ9 684 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 TNFRSF25Q93038 417 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 RFKQ969G6 155 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 PCDHB18PQ96TA0 734 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 SEC14L3Q9UDX4 400 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 FAM240BA0A1B0GVZ2 78 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 CTPS1P17812 591 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 PSMA1P25786 263 aaKnown RBP17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 CDKN2BP42772 138 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 NDST2P52849 883 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 MINDY2Q8NBR6 621 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 GLB1L3Q8NCI6 653 aaPredicted RBP17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 PHF12Q96QT6 1004 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 SWI5Q1ZZU3 235 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 MAP1SQ66K74 1059 aaPredicted RBP17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 JAZF1Q86VZ6 243 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 PHYKPLQ8IUZ5 450 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 KCTD15Q96SI1 283 aaPredicted RBP17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 OSBPL7Q9BZF2 842 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 MROH2AA6NES4 1674 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 CAPN8A6NHC0 703 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 REM1O75628 298 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 C4BPAP04003 597 aaKnown RBP17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 ARF4P18085 180 aaPredicted RBP17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 L1CAMP32004 1257 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 POU5F1Q01860 360 aaKnown RBP17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 CERCAMQ5T4B2 595 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 SPPL2CQ8IUH8 684 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 GIN1Q9NXP7 522 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 PDP1Q9P0J1 537 aaPredicted RBP17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 TSPAN8P19075 237 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 MYBPC3Q14896 1274 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 TEAD4Q15561 434 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 ARSHQ5FYA8 562 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 PLD5Q8N7P1 536 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 C11orf65Q8NCR3 313 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 GRPEL2Q8TAA5 225 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 FCGR1BQ92637 280 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 HES2Q9Y543 173 aa17.29■□□□□ 0.36
HMGXB3-206ENST00000613459 FPGTO14772 594 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 DNTTP04053 509 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 IFNW1P05000 195 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 NELFEP18615 380 aaKnown RBP17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 CTNNB1P35222 781 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 AP1S1P61966 158 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 CCNYL2Q5T2Q4 361 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 C6orf52Q5T4I8 152 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 SAMD14Q8IZD0 417 aaPredicted RBP17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 RGL4Q8IZJ4 473 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 CPT1BQ92523 772 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 PCBD2Q9H0N5 130 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 RNF208Q9H0X6 261 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 NR2E3Q9Y5X4 410 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 ATP6AP2A0A1C7CYW4 349 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 SIN3BO75182 1162 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 ATP6AP2O75787 350 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 SCN1BQ07699 218 aa17.28■□□□□ 0.36
HMGXB3-206ENST00000613459 PRKD1Q15139 912 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms