RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 NPEPPSL1A6NEC2 478 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 DRGXA6NNA5 263 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 WASH4PA8MWX3 477 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 PRPF4O43172 522 aaKnown RBP eCLIP9.77□□□□□ -0.85
CTCFL-222ENST00000609232 GRM2Q14416 872 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 NRF1Q16656 503 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 C4orf46Q504U0 113 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 KCTD11Q693B1 232 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 KLC3Q6P597 504 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 LYSMD3Q7Z3D4 306 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 PGBD3Q8N328 593 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 RNF175Q8N4F7 328 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 ULK4Q96C45 1275 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 MAGEH1Q9H213 219 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 DDX18Q9NVP1 670 aaKnown RBP9.77□□□□□ -0.85
CTCFL-222ENST00000609232 SEPT3Q9UH03 358 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 IGLV3-10A0A075B6K4 115 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 A0A0G2JN53 185 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 MYOCOSA0A1B0GUC4 107 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 GSNP06396 782 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 ATP6V1B1P15313 513 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 EPCAMP16422 314 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 ITPKAP23677 461 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 BMPR1AP36894 532 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 PPP3CCP48454 512 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 PKN3Q6P5Z2 889 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 RBM12BQ8IXT5 1001 aaKnown RBP9.77□□□□□ -0.85
CTCFL-222ENST00000609232 KBTBD2Q8IY47 623 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 DOK4Q8TEW6 326 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 MRGPRX2Q96LB1 330 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 LENG8Q96PV6 779 aaPredicted RBP9.77□□□□□ -0.85
CTCFL-222ENST00000609232 SEPHS2Q99611 448 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 ECSITQ9BQ95 431 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 DHRS4Q9BTZ2 278 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 KLF16Q9BXK1 252 aaPredicted RBP9.77□□□□□ -0.85
CTCFL-222ENST00000609232 RC3H2Q9HBD1 1191 aaKnown RBP9.77□□□□□ -0.85
CTCFL-222ENST00000609232 ZDHHC2Q9UIJ5 367 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 PAIP2BQ9ULR5 123 aaKnown RBP9.77□□□□□ -0.85
CTCFL-222ENST00000609232 SOX13Q9UN79 622 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 MRPS23Q9Y3D9 190 aaKnown RBP9.77□□□□□ -0.85
CTCFL-222ENST00000609232 SPO11Q9Y5K1 396 aa9.77□□□□□ -0.85
CTCFL-222ENST00000609232 FAM149AA5PLN7 773 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 H3BMM5 538 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 TYROBPO43914 113 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 TRIM13O60858 407 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 ANPEPP15144 967 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 GABRB3P28472 473 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 CYTH1Q15438 398 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 TEAD2Q15562 447 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 TRIP10Q15642 601 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 PRAMEF14Q5SWL7 426 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 LPCAT4Q643R3 524 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 GAREM2Q75VX8 874 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 PIWIL4Q7Z3Z4 852 aaKnown RBP9.76□□□□□ -0.85
CTCFL-222ENST00000609232 ZNF683Q8IZ20 524 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 PPP2R3CQ969Q6 453 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 VPS33AQ96AX1 596 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 TRMT2BQ96GJ1 504 aaKnown RBP9.76□□□□□ -0.85
CTCFL-222ENST00000609232 CEP295NLQ96MC4 621 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 PRICKLE1Q96MT3 831 aaPredicted RBP9.76□□□□□ -0.85
CTCFL-222ENST00000609232 OLFM1Q99784 485 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 ILKAPQ9H0C8 392 aaPredicted RBP9.76□□□□□ -0.85
CTCFL-222ENST00000609232 PCDHAC1Q9H158 963 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 TAS2R1Q9NYW7 299 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 ZNF180Q9UJW8 692 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 ARID1AO14497 2285 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 LOC400499M0QZD8 3231 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 PLIN3O60664 434 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 PRAMEF11O60813 436 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 PGM3O95394 542 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 F11P03951 625 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 BPGMP07738 259 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 ABCB1P08183 1280 aaPredicted RBP9.76□□□□□ -0.85
CTCFL-222ENST00000609232 TEDDM1Q5T9Z0 273 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 KLHDC10Q6PID8 442 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 CRTC3Q6UUV7 619 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 SIX5Q8N196 739 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 PIWIL2Q8TC59 973 aaKnown RBP9.76□□□□□ -0.85
CTCFL-222ENST00000609232 PNPT1Q8TCS8 783 aaKnown RBP9.76□□□□□ -0.85
CTCFL-222ENST00000609232 PBXIP1Q96AQ6 731 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 CLIP3Q96DZ5 547 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 CPNE1Q99829 537 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 TCF7L2Q9NQB0 619 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 FNIP2Q9P278 1114 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 COPG2Q9UBF2 871 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 KANSL1LA0AUZ9 987 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 TRAFD1O14545 582 aaPredicted RBP9.76□□□□□ -0.85
CTCFL-222ENST00000609232 TM9SF1O15321 606 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 CYBBP04839 570 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 RPL10P27635 214 aaKnown RBP9.76□□□□□ -0.85
CTCFL-222ENST00000609232 NEK2P51955 445 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 STARD3Q14849 445 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 AAK1Q2M2I8 961 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 POTEHQ6S545 545 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 ANKRD46Q86W74 232 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 PIANPQ8IYJ0 282 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 DEFB119Q8N690 84 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 HJURPQ8NCD3 748 aaPredicted RBP9.76□□□□□ -0.85
CTCFL-222ENST00000609232 RCN3Q96D15 328 aa9.76□□□□□ -0.85
CTCFL-222ENST00000609232 WWP1Q9H0M0 922 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms