RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 PRDM8Q9NQV8 689 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 FBXO8Q9NRD0 319 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 KLC4Q9NSK0 619 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 PILRAQ9UKJ1 303 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 ZNF711Q9Y462 761 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 PIEZO2Q9H5I5 2752 aa16.78■□□□□ 0.28
SCAF1-204ENST00000601038 RAD1O60671 282 aa16.77■□□□□ 0.28
SCAF1-204ENST00000601038 KRT1P04264 644 aa16.77■□□□□ 0.28
SCAF1-204ENST00000601038 TPM1P09493 284 aa16.77■□□□□ 0.28
SCAF1-204ENST00000601038 PIRTP0C851 137 aa16.77■□□□□ 0.28
SCAF1-204ENST00000601038 LIFP15018 202 aa16.77■□□□□ 0.28
SCAF1-204ENST00000601038 XRCC1P18887 633 aaPredicted RBP16.77■□□□□ 0.28
SCAF1-204ENST00000601038 SLC1A1P43005 524 aa16.77■□□□□ 0.28
SCAF1-204ENST00000601038 PCSK7Q16549 785 aa16.77■□□□□ 0.28
SCAF1-204ENST00000601038 TEX44Q53QW1 395 aa16.77■□□□□ 0.28
SCAF1-204ENST00000601038 ODF2Q5BJF6 829 aa16.77■□□□□ 0.28
SCAF1-204ENST00000601038 ZNF648Q5T619 568 aaPredicted RBP16.77■□□□□ 0.28
SCAF1-204ENST00000601038 CCDC70Q6NSX1 233 aa16.77■□□□□ 0.28
SCAF1-204ENST00000601038 CEACAM20Q6UY09 585 aa16.77■□□□□ 0.28
SCAF1-204ENST00000601038 RFX6Q8HWS3 928 aa16.77■□□□□ 0.28
SCAF1-204ENST00000601038 RNF25Q96BH1 459 aaPredicted RBP16.77■□□□□ 0.28
SCAF1-204ENST00000601038 PLEKHG4BQ96PX9 1271 aa16.77■□□□□ 0.28
SCAF1-204ENST00000601038 NHEJ1Q9H9Q4 299 aaPredicted RBP16.77■□□□□ 0.28
SCAF1-204ENST00000601038 UCK1Q9HA47 277 aa16.77■□□□□ 0.28
SCAF1-204ENST00000601038 GLOD4Q9HC38 313 aa16.77■□□□□ 0.28
SCAF1-204ENST00000601038 ABHD10Q9NUJ1 306 aa16.77■□□□□ 0.28
SCAF1-204ENST00000601038 SPTLC3Q9NUV7 552 aa16.77■□□□□ 0.28
SCAF1-204ENST00000601038 GEMIN8Q9NWZ8 242 aaKnown RBP16.77■□□□□ 0.28
SCAF1-204ENST00000601038 DDX56Q9NY93 547 aaKnown RBP16.77■□□□□ 0.28
SCAF1-204ENST00000601038 LILRA5A6NI73 299 aa16.76■□□□□ 0.27
SCAF1-204ENST00000601038 KMOO15229 486 aa16.76■□□□□ 0.27
SCAF1-204ENST00000601038 CAPN5O15484 640 aaPredicted RBP16.76■□□□□ 0.27
SCAF1-204ENST00000601038 NDST3O95803 873 aa16.76■□□□□ 0.27
SCAF1-204ENST00000601038 MT-CYBP00156 380 aaPredicted RBP16.76■□□□□ 0.27
SCAF1-204ENST00000601038 BPIP17213 487 aa16.76■□□□□ 0.27
SCAF1-204ENST00000601038 PTMSP20962 102 aa16.76■□□□□ 0.27
SCAF1-204ENST00000601038 MAPK9P45984 424 aa16.76■□□□□ 0.27
SCAF1-204ENST00000601038 UBE2IP63279 158 aaKnown RBP16.76■□□□□ 0.27
SCAF1-204ENST00000601038 KCNC4Q03721 635 aa16.76■□□□□ 0.27
SCAF1-204ENST00000601038 CLCA4Q14CN2 919 aa16.76■□□□□ 0.27
SCAF1-204ENST00000601038 BZW1Q7L1Q6 419 aaKnown RBP16.76■□□□□ 0.27
SCAF1-204ENST00000601038 PLXDC1Q8IUK5 500 aa16.76■□□□□ 0.27
SCAF1-204ENST00000601038 VSTM4Q8IW00 320 aa16.76■□□□□ 0.27
SCAF1-204ENST00000601038 RHOT1Q8IXI2 618 aa16.76■□□□□ 0.27
SCAF1-204ENST00000601038 NLGN4XQ8N0W4 816 aa16.76■□□□□ 0.27
SCAF1-204ENST00000601038 NLGN4YQ8NFZ3 816 aaPredicted RBP16.76■□□□□ 0.27
SCAF1-204ENST00000601038 SPATA22Q8NHS9 363 aa16.76■□□□□ 0.27
SCAF1-204ENST00000601038 TBC1D10AQ9BXI6 508 aa16.76■□□□□ 0.27
SCAF1-204ENST00000601038 ADNPQ9H2P0 1102 aa16.76■□□□□ 0.27
SCAF1-204ENST00000601038 OSGEPL1Q9H4B0 414 aa16.76■□□□□ 0.27
SCAF1-204ENST00000601038 CLMPQ9H6B4 373 aa16.76■□□□□ 0.27
SCAF1-204ENST00000601038 A0A0A6YYK5 440 aaPredicted RBP16.75■□□□□ 0.27
SCAF1-204ENST00000601038 PYCARD-AS1I3L0S3 204 aa16.75■□□□□ 0.27
SCAF1-204ENST00000601038 VEGFDO43915 354 aa16.75■□□□□ 0.27
SCAF1-204ENST00000601038 WISP1O95388 367 aa16.75■□□□□ 0.27
SCAF1-204ENST00000601038 SLC4A1P02730 911 aa16.75■□□□□ 0.27
SCAF1-204ENST00000601038 ZNF7P17097 686 aaPredicted RBP16.75■□□□□ 0.27
SCAF1-204ENST00000601038 PTPN3P26045 913 aa16.75■□□□□ 0.27
SCAF1-204ENST00000601038 MAP4P27816 1152 aaKnown RBP16.75■□□□□ 0.27
SCAF1-204ENST00000601038 NR2C2P49116 596 aa16.75■□□□□ 0.27
SCAF1-204ENST00000601038 DYNLT1P63172 113 aa16.75■□□□□ 0.27
SCAF1-204ENST00000601038 TCEAL1Q15170 157 aa16.75■□□□□ 0.27
SCAF1-204ENST00000601038 BORAQ6PGQ7 559 aa16.75■□□□□ 0.27
SCAF1-204ENST00000601038 CRTC3Q6UUV7 619 aa16.75■□□□□ 0.27
SCAF1-204ENST00000601038 MFSD7Q6UXD7 560 aa16.75■□□□□ 0.27
SCAF1-204ENST00000601038 TMEM26Q6ZUK4 368 aa16.75■□□□□ 0.27
SCAF1-204ENST00000601038 B4GALNT4Q76KP1 1039 aa16.75■□□□□ 0.27
SCAF1-204ENST00000601038 LRRTM4Q86VH4 590 aa16.75■□□□□ 0.27
SCAF1-204ENST00000601038 SLC45A3Q96JT2 553 aa16.75■□□□□ 0.27
SCAF1-204ENST00000601038 TEKT5Q96M29 485 aa16.75■□□□□ 0.27
SCAF1-204ENST00000601038 CTRCQ99895 268 aa16.75■□□□□ 0.27
SCAF1-204ENST00000601038 TIMM29Q9BSF4 260 aa16.75■□□□□ 0.27
SCAF1-204ENST00000601038 ANP32EQ9BTT0 268 aa16.75■□□□□ 0.27
SCAF1-204ENST00000601038 SLC25A18Q9H1K4 315 aa16.75■□□□□ 0.27
SCAF1-204ENST00000601038 SCHIP1Q9P0W5 487 aaPredicted RBP16.75■□□□□ 0.27
SCAF1-204ENST00000601038 SLC23A2Q9UGH3 650 aa16.75■□□□□ 0.27
SCAF1-204ENST00000601038 KLHL3Q9UH77 587 aa16.75■□□□□ 0.27
SCAF1-204ENST00000601038 INTUQ9ULD6 942 aa16.75■□□□□ 0.27
SCAF1-204ENST00000601038 TMEM184BQ9Y519 407 aaPredicted RBP16.75■□□□□ 0.27
SCAF1-204ENST00000601038 MN1Q10571 1320 aaPredicted RBP16.74■□□□□ 0.27
SCAF1-204ENST00000601038 PRR19A6NJB7 356 aa16.74■□□□□ 0.27
SCAF1-204ENST00000601038 ZNF891A8MT65 544 aaPredicted RBP16.74■□□□□ 0.27
SCAF1-204ENST00000601038 AURKAO14965 403 aa16.74■□□□□ 0.27
SCAF1-204ENST00000601038 SUV39H1O43463 412 aa16.74■□□□□ 0.27
SCAF1-204ENST00000601038 MFAP3LO75121 409 aa16.74■□□□□ 0.27
SCAF1-204ENST00000601038 PPFIA2O75334 1257 aa16.74■□□□□ 0.27
SCAF1-204ENST00000601038 PMPCBO75439 489 aa16.74■□□□□ 0.27
SCAF1-204ENST00000601038 CDK14O94921 469 aa16.74■□□□□ 0.27
SCAF1-204ENST00000601038 VIPP01282 170 aa16.74■□□□□ 0.27
SCAF1-204ENST00000601038 C9P02748 559 aa16.74■□□□□ 0.27
SCAF1-204ENST00000601038 ANKRD34CP0C6C1 535 aa16.74■□□□□ 0.27
SCAF1-204ENST00000601038 SLC19A1P41440 591 aa16.74■□□□□ 0.27
SCAF1-204ENST00000601038 TFDP2Q14188 446 aa16.74■□□□□ 0.27
SCAF1-204ENST00000601038 PRKD1Q15139 912 aaPredicted RBP16.74■□□□□ 0.27
SCAF1-204ENST00000601038 INSCQ1MX18 579 aa16.74■□□□□ 0.27
SCAF1-204ENST00000601038 ATG14Q6ZNE5 492 aa16.74■□□□□ 0.27
SCAF1-204ENST00000601038 CATSPER2Q96P56 530 aa16.74■□□□□ 0.27
SCAF1-204ENST00000601038 VPS35Q96QK1 796 aa16.74■□□□□ 0.27
SCAF1-204ENST00000601038 EFHD1Q9BUP0 239 aa16.74■□□□□ 0.27
SCAF1-204ENST00000601038 TRIT1Q9H3H1 467 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms