RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 DNAJC6O75061 913 aa17.36■□□□□ 0.37
SSBP4-207ENST00000600244 RASSF9O75901 435 aa17.36■□□□□ 0.37
SSBP4-207ENST00000600244 UBXN7O94888 489 aa17.36■□□□□ 0.37
SSBP4-207ENST00000600244 SLC2A4P14672 509 aa17.36■□□□□ 0.37
SSBP4-207ENST00000600244 EPHB2P29323 1055 aa17.36■□□□□ 0.37
SSBP4-207ENST00000600244 GLRBP48167 497 aa17.36■□□□□ 0.37
SSBP4-207ENST00000600244 VAV2P52735 878 aa17.36■□□□□ 0.37
SSBP4-207ENST00000600244 NSUN2Q08J23 767 aaKnown RBP eCLIP17.36■□□□□ 0.37
SSBP4-207ENST00000600244 ZNF235Q14590 738 aa17.36■□□□□ 0.37
SSBP4-207ENST00000600244 C15orf59Q2T9L4 293 aaPredicted RBP17.36■□□□□ 0.37
SSBP4-207ENST00000600244 C2CD6Q53TS8 623 aa17.36■□□□□ 0.37
SSBP4-207ENST00000600244 FIGNQ5HY92 759 aa17.36■□□□□ 0.37
SSBP4-207ENST00000600244 CUZD1Q86UP6 607 aa17.36■□□□□ 0.37
SSBP4-207ENST00000600244 ZBTB2Q8N680 514 aa17.36■□□□□ 0.37
SSBP4-207ENST00000600244 CCDC185Q8N715 623 aa17.36■□□□□ 0.37
SSBP4-207ENST00000600244 EMC1Q8N766 993 aa17.36■□□□□ 0.37
SSBP4-207ENST00000600244 TMEM35BQ8NCS4 154 aa17.36■□□□□ 0.37
SSBP4-207ENST00000600244 COX14Q96I36 57 aa17.36■□□□□ 0.37
SSBP4-207ENST00000600244 PLEKHG4BQ96PX9 1271 aa17.36■□□□□ 0.37
SSBP4-207ENST00000600244 FAM207AQ9NSI2 230 aaPredicted RBP17.36■□□□□ 0.37
SSBP4-207ENST00000600244 SEMA5BQ9P283 1151 aa17.36■□□□□ 0.37
SSBP4-207ENST00000600244 PRKAB1Q9Y478 270 aa17.36■□□□□ 0.37
SSBP4-207ENST00000600244 MYO7BQ6PIF6 2116 aa17.35■□□□□ 0.37
SSBP4-207ENST00000600244 CBFA2T2O43439 604 aa17.35■□□□□ 0.37
SSBP4-207ENST00000600244 PRICKLE3O43900 615 aaPredicted RBP17.35■□□□□ 0.37
SSBP4-207ENST00000600244 SNRPB2P08579 225 aaKnown RBP17.35■□□□□ 0.37
SSBP4-207ENST00000600244 FOLR1P15328 257 aa17.35■□□□□ 0.37
SSBP4-207ENST00000600244 RRADP55042 308 aa17.35■□□□□ 0.37
SSBP4-207ENST00000600244 JAM2P57087 298 aa17.35■□□□□ 0.37
SSBP4-207ENST00000600244 KRTAP10-9P60411 292 aa17.35■□□□□ 0.37
SSBP4-207ENST00000600244 CDO1Q16878 200 aa17.35■□□□□ 0.37
SSBP4-207ENST00000600244 CCDC14Q49A88 953 aa17.35■□□□□ 0.37
SSBP4-207ENST00000600244 TMCO4Q5TGY1 634 aa17.35■□□□□ 0.37
SSBP4-207ENST00000600244 CACHD1Q5VU97 1274 aa17.35■□□□□ 0.37
SSBP4-207ENST00000600244 LYPLAL1Q5VWZ2 237 aa17.35■□□□□ 0.37
SSBP4-207ENST00000600244 RFLNAQ6ZTI6 216 aa17.35■□□□□ 0.37
SSBP4-207ENST00000600244 TMEM26Q6ZUK4 368 aa17.35■□□□□ 0.37
SSBP4-207ENST00000600244 CHST15Q7LFX5 561 aaPredicted RBP17.35■□□□□ 0.37
SSBP4-207ENST00000600244 FJX1Q86VR8 437 aa17.35■□□□□ 0.37
SSBP4-207ENST00000600244 BPHLQ86WA6 291 aaPredicted RBP17.35■□□□□ 0.37
SSBP4-207ENST00000600244 PAF1Q8N7H5 531 aa17.35■□□□□ 0.37
SSBP4-207ENST00000600244 AVL9Q8NBF6 648 aa17.35■□□□□ 0.37
SSBP4-207ENST00000600244 ITLN2Q8WWU7 325 aaPredicted RBP17.35■□□□□ 0.37
SSBP4-207ENST00000600244 STK33Q9BYT3 514 aa17.35■□□□□ 0.37
SSBP4-207ENST00000600244 ABCG8Q9H221 673 aa17.35■□□□□ 0.37
SSBP4-207ENST00000600244 LRRC19Q9H756 370 aa17.35■□□□□ 0.37
SSBP4-207ENST00000600244 CHST11Q9NPF2 352 aa17.35■□□□□ 0.37
SSBP4-207ENST00000600244 ZNHIT2Q9UHR6 403 aa17.35■□□□□ 0.37
SSBP4-207ENST00000600244 KCNK6Q9Y257 313 aa17.35■□□□□ 0.37
SSBP4-207ENST00000600244 HTRA2O43464 458 aaPredicted RBP17.34■□□□□ 0.37
SSBP4-207ENST00000600244 SNX2O60749 519 aa17.34■□□□□ 0.37
SSBP4-207ENST00000600244 RAB40ALP0C0E4 278 aa17.34■□□□□ 0.37
SSBP4-207ENST00000600244 EDN3P14138 238 aa17.34■□□□□ 0.37
SSBP4-207ENST00000600244 COX6B1P14854 86 aa17.34■□□□□ 0.37
SSBP4-207ENST00000600244 AMD1P17707 334 aa17.34■□□□□ 0.37
SSBP4-207ENST00000600244 CAPN3P20807 821 aa17.34■□□□□ 0.37
SSBP4-207ENST00000600244 TNFAIP3P21580 790 aa17.34■□□□□ 0.37
SSBP4-207ENST00000600244 PDE1BQ01064 536 aa17.34■□□□□ 0.37
SSBP4-207ENST00000600244 GPS2Q13227 327 aa17.34■□□□□ 0.37
SSBP4-207ENST00000600244 TUBB3Q13509 450 aa17.34■□□□□ 0.37
SSBP4-207ENST00000600244 ZNF630Q2M218 657 aaPredicted RBP17.34■□□□□ 0.37
SSBP4-207ENST00000600244 FAM69BQ5VUD6 431 aa17.34■□□□□ 0.37
SSBP4-207ENST00000600244 NLRP8Q86W28 1048 aa17.34■□□□□ 0.37
SSBP4-207ENST00000600244 PYROXD2Q8N2H3 581 aa17.34■□□□□ 0.37
SSBP4-207ENST00000600244 NEK11Q8NG66 645 aa17.34■□□□□ 0.37
SSBP4-207ENST00000600244 CENPIQ92674 756 aaPredicted RBP17.34■□□□□ 0.37
SSBP4-207ENST00000600244 MR1Q95460 341 aa17.34■□□□□ 0.37
SSBP4-207ENST00000600244 RELTQ969Z4 430 aa17.34■□□□□ 0.37
SSBP4-207ENST00000600244 NTAN1Q96AB6 310 aa17.34■□□□□ 0.37
SSBP4-207ENST00000600244 SLC41A2Q96JW4 573 aa17.34■□□□□ 0.37
SSBP4-207ENST00000600244 CHST8Q9H2A9 424 aa17.34■□□□□ 0.37
SSBP4-207ENST00000600244 EPHA6Q9UF33 1036 aa17.34■□□□□ 0.37
SSBP4-207ENST00000600244 TCFL5Q9UL49 500 aa17.34■□□□□ 0.37
SSBP4-207ENST00000600244 SNX7Q9UNH6 387 aa17.34■□□□□ 0.37
SSBP4-207ENST00000600244 PIKFYVEQ9Y2I7 2098 aa17.33■□□□□ 0.37
SSBP4-207ENST00000600244 FOXN3O00409 490 aaPredicted RBP17.33■□□□□ 0.36
SSBP4-207ENST00000600244 PALMO75781 387 aa17.33■□□□□ 0.36
SSBP4-207ENST00000600244 TPM3P06753 285 aa17.33■□□□□ 0.36
SSBP4-207ENST00000600244 XRCC1P18887 633 aaPredicted RBP17.33■□□□□ 0.36
SSBP4-207ENST00000600244 CA5AP35218 305 aa17.33■□□□□ 0.36
SSBP4-207ENST00000600244 POLR2FP61218 127 aaKnown RBP17.33■□□□□ 0.36
SSBP4-207ENST00000600244 PTPRRQ15256 657 aa17.33■□□□□ 0.36
SSBP4-207ENST00000600244 LCN10Q6JVE6 187 aa17.33■□□□□ 0.36
SSBP4-207ENST00000600244 STRADAQ7RTN6 431 aa17.33■□□□□ 0.36
SSBP4-207ENST00000600244 FAM71AQ8IYT1 594 aa17.33■□□□□ 0.36
SSBP4-207ENST00000600244 RXFP2Q8WXD0 754 aa17.33■□□□□ 0.36
SSBP4-207ENST00000600244 AGAP2Q99490 1192 aa17.33■□□□□ 0.36
SSBP4-207ENST00000600244 WASH6PQ9NQA3 447 aa17.33■□□□□ 0.36
SSBP4-207ENST00000600244 FER1L5A0AVI2 2057 aa17.33■□□□□ 0.36
SSBP4-207ENST00000600244 A0A1W2PQ67 120 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 FAM170AA1A519 330 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 NPIPB15A6NHN6 443 aaPredicted RBP17.32■□□□□ 0.36
SSBP4-207ENST00000600244 F8VZ95 297 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 HTR1EP28566 365 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 SCNN1BP51168 640 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 AP1S1P61966 158 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 KCNAB1Q14722 419 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 LLGL1Q15334 1064 aa17.32■□□□□ 0.36
SSBP4-207ENST00000600244 BNC2Q6ZN30 1099 aaPredicted RBP17.32■□□□□ 0.36
SSBP4-207ENST00000600244 FAM92BQ6ZTR7 304 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms