RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 TTPAP49638 278 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 ARSDP51689 593 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 GUCY2DQ02846 1103 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 GSTM4Q03013 218 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 ILF3Q12906 894 aaKnown RBP eCLIP16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 FRG1Q14331 258 aaKnown RBP16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 SHBQ15464 509 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 FASTKD1Q53R41 847 aaKnown RBP16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 ZRANB3Q5FWF4 1079 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 KDM7AQ6ZMT4 941 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 ADGRG6Q86SQ4 1221 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 ALYREFQ86V81 257 aaKnown RBP16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 ZNF548Q8NEK5 533 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 GPR150Q8NGU9 434 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 CALML6Q8TD86 181 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 PDXPQ96GD0 296 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 DCUN1D1Q96GG9 259 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 CARS2Q9HA77 564 aaKnown RBP16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 UGT1A7Q9HAW7 530 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 UGT1A10Q9HAW8 530 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 UGT1A8Q9HAW9 530 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 CYP4F12Q9HCS2 524 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 RXFP3Q9NSD7 469 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 ZDHHC3Q9NYG2 299 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 NCKIPSDQ9NZQ3 722 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 ATXN10Q9UBB4 475 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 SLC2A6Q9UGQ3 507 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 TMPRSS11EQ9UL52 423 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 SUFUQ9UMX1 484 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 VPS9D1Q9Y2B5 631 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 FAM169AQ9Y6X4 670 aa16.38■□□□□ 0.21
SHKBP1-219ENST00000599575 KMOO15229 486 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 DNAJC6O75061 913 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 AP2A2O94973 939 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 GOT2P00505 430 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 NMBRP28336 390 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 FOXN2P32314 431 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 NSG1P42857 185 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 PLTPP55058 493 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 DHX9Q08211 1270 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 CUL1Q13616 776 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 KCTD19Q17RG1 926 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 BBS9Q3SYG4 887 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 PYCR3Q53H96 274 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 PRRT3Q5FWE3 981 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 SPANXN3Q5MJ09 141 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 FNBP1LQ5T0N5 605 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 RNF187Q5TA31 235 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 PACS1Q6VY07 963 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 KANSL1Q7Z3B3 1105 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 SDCCAG8Q86SQ7 713 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 GKN2Q86XP6 184 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 EIF1ADQ8N9N8 165 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 TSACCQ96A04 125 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 MFSD3Q96ES6 412 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 OR2M4Q96R27 311 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 GSDMCQ9BYG8 508 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 OR2AG1Q9H205 316 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 SUDS3Q9H7L9 328 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 IL21RQ9HBE5 538 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 EPB41L5Q9HCM4 733 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 CATSPERZQ9NTU4 200 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 NLGN3Q9NZ94 848 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 MTRF1LQ9UGC7 380 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 KLF15Q9UIH9 416 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 TMEM98Q9Y2Y6 226 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 TEX264Q9Y6I9 313 aa16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 OAS3Q9Y6K5 1087 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-219ENST00000599575 BPTFQ12830 3046 aa16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 ZCWPW2A0A1B0GU75 182 aa16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 SLC30A4O14863 429 aa16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 CD3EAPO15446 510 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 GRID2O43424 1007 aa16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 GDF9O60383 454 aa16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 VAPBO95292 243 aa16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 ZNF8P17098 575 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 VCLP18206 1134 aa16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 HOXD11P31277 338 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 AKT1P31749 480 aa16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 ARCN1P48444 511 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 CLCNKAP51800 687 aa16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 MRPS25P82663 173 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 SLC7A5Q01650 507 aa16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 ILF2Q12905 390 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 LONRF1Q17RB8 773 aa16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 PRAMEF14Q5SWL7 426 aa16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 DOK6Q6PKX4 331 aa16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 TAS2R42Q7RTR8 314 aa16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 RD3Q7Z3Z2 195 aa16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 TRIM74Q86UV6 250 aa16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 LRRTM4Q86VH4 590 aa16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 SERPINA9Q86WD7 417 aa16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 LRRC6Q86X45 466 aa16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 IFT20Q8IY31 132 aa16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 RBFAQ8N0V3 343 aa16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 FBXO25Q8TCJ0 367 aa16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 GPBAR1Q8TDU6 330 aa16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 ZNF669Q96BR6 464 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-219ENST00000599575 TIMM29Q9BSF4 260 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms