RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 AADACL2Q6P093 401 aa18.53■□□□□ 0.56
PNKP-213ENST00000599543 SPOCD1Q6ZMY3 1216 aa18.53■□□□□ 0.56
PNKP-213ENST00000599543 KDELC2Q7Z4H8 507 aa18.53■□□□□ 0.56
PNKP-213ENST00000599543 SLC9B2Q86UD5 537 aa18.53■□□□□ 0.56
PNKP-213ENST00000599543 FAM129CQ86XR2 697 aa18.53■□□□□ 0.56
PNKP-213ENST00000599543 PHYKPLQ8IUZ5 450 aa18.53■□□□□ 0.56
PNKP-213ENST00000599543 CCDC50Q8IVM0 306 aa18.53■□□□□ 0.56
PNKP-213ENST00000599543 ANP32BQ92688 251 aaKnown RBP18.53■□□□□ 0.56
PNKP-213ENST00000599543 ART4Q93070 314 aa18.53■□□□□ 0.56
PNKP-213ENST00000599543 IMP4Q96G21 291 aaKnown RBP18.53■□□□□ 0.56
PNKP-213ENST00000599543 OLFM3Q96PB7 478 aa18.53■□□□□ 0.56
PNKP-213ENST00000599543 ARHGAP9Q9BRR9 750 aa18.53■□□□□ 0.56
PNKP-213ENST00000599543 SARS2Q9NP81 518 aaKnown RBP18.53■□□□□ 0.56
PNKP-213ENST00000599543 TBC1D29Q9UFV1 150 aa18.53■□□□□ 0.56
PNKP-213ENST00000599543 SHOC2Q9UQ13 582 aa18.53■□□□□ 0.56
PNKP-213ENST00000599543 PCDHGA3Q9Y5H0 932 aa18.53■□□□□ 0.56
PNKP-213ENST00000599543 BSNQ9UPA5 3926 aa18.53■□□□□ 0.56
PNKP-213ENST00000599543 ASH1LQ9NR48 2969 aaKnown RBP18.52■□□□□ 0.56
PNKP-213ENST00000599543 GRID2O43424 1007 aa18.52■□□□□ 0.56
PNKP-213ENST00000599543 SNX2O60749 519 aa18.52■□□□□ 0.56
PNKP-213ENST00000599543 CDKN2BP42772 138 aa18.52■□□□□ 0.56
PNKP-213ENST00000599543 ADCY2Q08462 1091 aa18.52■□□□□ 0.56
PNKP-213ENST00000599543 PCSK7Q16549 785 aa18.52■□□□□ 0.56
PNKP-213ENST00000599543 ALS2CLQ60I27 953 aa18.52■□□□□ 0.56
PNKP-213ENST00000599543 KATNAL2Q8IYT4 538 aa18.52■□□□□ 0.56
PNKP-213ENST00000599543 JPH3Q8WXH2 748 aaPredicted RBP18.52■□□□□ 0.56
PNKP-213ENST00000599543 EXTL1Q92935 676 aa18.52■□□□□ 0.56
PNKP-213ENST00000599543 PMEPA1Q969W9 287 aa18.52■□□□□ 0.56
PNKP-213ENST00000599543 SH3KBP1Q96B97 665 aa18.52■□□□□ 0.56
PNKP-213ENST00000599543 HAUS1Q96CS2 278 aa18.52■□□□□ 0.56
PNKP-213ENST00000599543 TRIB3Q96RU7 358 aa18.52■□□□□ 0.56
PNKP-213ENST00000599543 ZSCAN5AQ9BUG6 496 aa18.52■□□□□ 0.56
PNKP-213ENST00000599543 DDA1Q9BW61 102 aa18.52■□□□□ 0.56
PNKP-213ENST00000599543 HEMGNQ9BXL5 484 aa18.52■□□□□ 0.56
PNKP-213ENST00000599543 ASPSCR1Q9BZE9 553 aa18.52■□□□□ 0.56
PNKP-213ENST00000599543 BRD8Q9H0E9 1235 aa18.52■□□□□ 0.56
PNKP-213ENST00000599543 CARD9Q9H257 536 aa18.52■□□□□ 0.56
PNKP-213ENST00000599543 RAD18Q9NS91 495 aa18.52■□□□□ 0.56
PNKP-213ENST00000599543 SAE1Q9UBE0 346 aaPredicted RBP18.52■□□□□ 0.56
PNKP-213ENST00000599543 B3GALT1Q9Y5Z6 326 aa18.52■□□□□ 0.56
PNKP-213ENST00000599543 EFCAB7A8K855 629 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 J3QKU1 62 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 NUAK1O60285 661 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 SLC25A14O95258 325 aaPredicted RBP18.51■□□□□ 0.55
PNKP-213ENST00000599543 ZIC2O95409 532 aaPredicted RBP18.51■□□□□ 0.55
PNKP-213ENST00000599543 CCDC175P0C221 793 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 PIRTP0C851 137 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 F3P13726 295 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 CTNNA1P35221 906 aaKnown RBP18.51■□□□□ 0.55
PNKP-213ENST00000599543 RAB15P59190 212 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 DCDC1P59894 354 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 SNAP47Q5SQN1 464 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 IYDQ6PHW0 289 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 WDR74Q6RFH5 385 aaPredicted RBP18.51■□□□□ 0.55
PNKP-213ENST00000599543 PEX26Q7Z412 305 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 TXLNBQ8N3L3 684 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 ALG3Q92685 438 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 EID2BQ96D98 161 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 GPR63Q9BZJ6 419 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 SLC25A51Q9H1U9 297 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 OR2AG1Q9H205 316 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 MAGEE1Q9HCI5 957 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 ARFGAP3Q9NP61 516 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 SLC39A1Q9NY26 324 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 ATXN10Q9UBB4 475 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 AMFRQ9UKV5 643 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 PPP2R2CQ9Y2T4 447 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 ZNF711Q9Y462 761 aa18.51■□□□□ 0.55
PNKP-213ENST00000599543 KIR2DS5A0A0G2JLQ3 304 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 A0A0G2JNG1 304 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 A6NCN8 305 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 OR5K4A6NMS3 321 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 B4E171 279 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 GPR89AB7ZAQ6 455 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 KIR2DS3K7RE56 304 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 ZRANB2O95218 330 aaKnown RBP eCLIP18.5■□□□□ 0.55
PNKP-213ENST00000599543 GPR89BP0CG08 455 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 ZNF8P17098 575 aaPredicted RBP18.5■□□□□ 0.55
PNKP-213ENST00000599543 CTNNA2P26232 953 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 TSPAN7P41732 249 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 MAPK9P45984 424 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 EPHA4P54764 986 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 CDK18Q07002 472 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 KIR2DS5Q14953 304 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 SLC14A2Q15849 920 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 DCAF12Q5T6F0 453 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 PDPK2PQ6A1A2 396 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 CCDC70Q6NSX1 233 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 XKR5Q6UX68 686 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 TRAM1L1Q8N609 369 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 IL22RA1Q8N6P7 574 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 AVL9Q8NBF6 648 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 GPR26Q8NDV2 337 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 NCSTNQ92542 709 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 PDLIM2Q96JY6 352 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.5■□□□□ 0.55
PNKP-213ENST00000599543 OSGEPL1Q9H4B0 414 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 TRIM39Q9HCM9 518 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 OCIAD1Q9NX40 245 aa18.5■□□□□ 0.55
PNKP-213ENST00000599543 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms