RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 GDAP1Q8TB36 358 aa16.53■□□□□ 0.24
SSBP4-204ENST00000597724 ZNF398Q8TD17 642 aa16.53■□□□□ 0.24
SSBP4-204ENST00000597724 PATE1Q8WXA2 126 aa16.53■□□□□ 0.24
SSBP4-204ENST00000597724 MS4A14Q96JA4 679 aa16.53■□□□□ 0.24
SSBP4-204ENST00000597724 RAB6BQ9NRW1 208 aa16.53■□□□□ 0.24
SSBP4-204ENST00000597724 LRIT1Q9P2V4 623 aa16.53■□□□□ 0.24
SSBP4-204ENST00000597724 FKBPLQ9UIM3 349 aa16.53■□□□□ 0.24
SSBP4-204ENST00000597724 RNF215Q9Y6U7 377 aa16.53■□□□□ 0.24
SSBP4-204ENST00000597724 USP24Q9UPU5 2620 aa16.52■□□□□ 0.24
SSBP4-204ENST00000597724 CASC3O15234 703 aaKnown RBP16.52■□□□□ 0.24
SSBP4-204ENST00000597724 GPR39O43194 453 aa16.52■□□□□ 0.24
SSBP4-204ENST00000597724 ZSCAN5DPP0CG00 497 aa16.52■□□□□ 0.24
SSBP4-204ENST00000597724 ACP5P13686 325 aa16.52■□□□□ 0.24
SSBP4-204ENST00000597724 CA5AP35218 305 aa16.52■□□□□ 0.24
SSBP4-204ENST00000597724 HADHAP40939 763 aa16.52■□□□□ 0.24
SSBP4-204ENST00000597724 CLCNKAP51800 687 aa16.52■□□□□ 0.24
SSBP4-204ENST00000597724 MAZP56270 477 aaKnown RBP16.52■□□□□ 0.24
SSBP4-204ENST00000597724 LDLRAP1Q5SW96 308 aa16.52■□□□□ 0.24
SSBP4-204ENST00000597724 C4orf22Q6V702 233 aa16.52■□□□□ 0.24
SSBP4-204ENST00000597724 GSTA5Q7RTV2 222 aa16.52■□□□□ 0.24
SSBP4-204ENST00000597724 ARL14Q8N4G2 192 aa16.52■□□□□ 0.24
SSBP4-204ENST00000597724 KDF1Q8NAX2 398 aaPredicted RBP16.52■□□□□ 0.24
SSBP4-204ENST00000597724 DDHD1Q8NEL9 900 aa16.52■□□□□ 0.24
SSBP4-204ENST00000597724 OR52K1Q8NGK4 314 aa16.52■□□□□ 0.24
SSBP4-204ENST00000597724 OSBPL9Q96SU4 736 aa16.52■□□□□ 0.24
SSBP4-204ENST00000597724 SMOXQ9NWM0 555 aa16.52■□□□□ 0.24
SSBP4-204ENST00000597724 PIH1D1Q9NWS0 290 aaKnown RBP16.52■□□□□ 0.24
SSBP4-204ENST00000597724 COL27A1Q8IZC6 1860 aaPredicted RBP16.52■□□□□ 0.23
SSBP4-204ENST00000597724 ZNF106Q9H2Y7 1883 aaKnown RBP16.52■□□□□ 0.23
SSBP4-204ENST00000597724 TMEM8BA6NDV4 472 aa16.51■□□□□ 0.23
SSBP4-204ENST00000597724 AGAP14A8MT82 685 aa16.51■□□□□ 0.23
SSBP4-204ENST00000597724 E7EVH7 732 aa16.51■□□□□ 0.23
SSBP4-204ENST00000597724 NTN3O00634 580 aaPredicted RBP16.51■□□□□ 0.23
SSBP4-204ENST00000597724 KMOO15229 486 aa16.51■□□□□ 0.23
SSBP4-204ENST00000597724 TCEA3O75764 348 aa16.51■□□□□ 0.23
SSBP4-204ENST00000597724 SRP72O76094 671 aaKnown RBP16.51■□□□□ 0.23
SSBP4-204ENST00000597724 PRAMEF1O95521 474 aa16.51■□□□□ 0.23
SSBP4-204ENST00000597724 EML2O95834 649 aa16.51■□□□□ 0.23
SSBP4-204ENST00000597724 TMPRSS15P98073 1019 aa16.51■□□□□ 0.23
SSBP4-204ENST00000597724 CDH17Q12864 832 aa16.51■□□□□ 0.23
SSBP4-204ENST00000597724 POU6F1Q14863 301 aa16.51■□□□□ 0.23
SSBP4-204ENST00000597724 GPRC6AQ5T6X5 926 aa16.51■□□□□ 0.23
SSBP4-204ENST00000597724 ZNF438Q7Z4V0 828 aa16.51■□□□□ 0.23
SSBP4-204ENST00000597724 LRRTM4Q86VH4 590 aa16.51■□□□□ 0.23
SSBP4-204ENST00000597724 ZNF547Q8IVP9 402 aa16.51■□□□□ 0.23
SSBP4-204ENST00000597724 COG1Q8WTW3 980 aa16.51■□□□□ 0.23
SSBP4-204ENST00000597724 TTC25Q96NG3 672 aa16.51■□□□□ 0.23
SSBP4-204ENST00000597724 DEPDC7Q96QD5 511 aa16.51■□□□□ 0.23
SSBP4-204ENST00000597724 ASB8Q9H765 288 aa16.51■□□□□ 0.23
SSBP4-204ENST00000597724 KLC4Q9NSK0 619 aa16.51■□□□□ 0.23
SSBP4-204ENST00000597724 NLE1Q9NVX2 485 aaPredicted RBP16.51■□□□□ 0.23
SSBP4-204ENST00000597724 TBC1D29Q9UFV1 150 aa16.51■□□□□ 0.23
SSBP4-204ENST00000597724 SLC23A2Q9UGH3 650 aa16.51■□□□□ 0.23
SSBP4-204ENST00000597724 PYCARDQ9ULZ3 195 aa16.51■□□□□ 0.23
SSBP4-204ENST00000597724 KCNK6Q9Y257 313 aa16.51■□□□□ 0.23
SSBP4-204ENST00000597724 A0A1W2PQM1 296 aa16.5■□□□□ 0.23
SSBP4-204ENST00000597724 CSO75390 466 aaKnown RBP16.5■□□□□ 0.23
SSBP4-204ENST00000597724 APRTP07741 180 aa16.5■□□□□ 0.23
SSBP4-204ENST00000597724 ZNF7P17097 686 aaPredicted RBP16.5■□□□□ 0.23
SSBP4-204ENST00000597724 GRIA1P42261 906 aa16.5■□□□□ 0.23
SSBP4-204ENST00000597724 LMAN1P49257 510 aa16.5■□□□□ 0.23
SSBP4-204ENST00000597724 CCL7P80098 99 aa16.5■□□□□ 0.23
SSBP4-204ENST00000597724 NFATC2Q13469 925 aa16.5■□□□□ 0.23
SSBP4-204ENST00000597724 ISXQ2M1V0 245 aa16.5■□□□□ 0.23
SSBP4-204ENST00000597724 CRTC3Q6UUV7 619 aa16.5■□□□□ 0.23
SSBP4-204ENST00000597724 PPP1R21Q6ZMI0 780 aa16.5■□□□□ 0.23
SSBP4-204ENST00000597724 RBM44Q6ZP01 1051 aaKnown RBP16.5■□□□□ 0.23
SSBP4-204ENST00000597724 C11orf96Q7Z7L8 435 aa16.5■□□□□ 0.23
SSBP4-204ENST00000597724 DNAAF3Q8N9W5 541 aa16.5■□□□□ 0.23
SSBP4-204ENST00000597724 NAP1L3Q99457 506 aaPredicted RBP16.5■□□□□ 0.23
SSBP4-204ENST00000597724 TIMM29Q9BSF4 260 aa16.5■□□□□ 0.23
SSBP4-204ENST00000597724 AP1M1Q9BXS5 423 aa16.5■□□□□ 0.23
SSBP4-204ENST00000597724 ZCCHC2Q9C0B9 1178 aaKnown RBP16.5■□□□□ 0.23
SSBP4-204ENST00000597724 CASS4Q9NQ75 786 aa16.5■□□□□ 0.23
SSBP4-204ENST00000597724 SNX12Q9UMY4 172 aa16.5■□□□□ 0.23
SSBP4-204ENST00000597724 UNC13CQ8NB66 2214 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 A6NCN8 305 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 MROH6A6NGR9 719 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 PRR19A6NJB7 356 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 H7C0S8 307 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 PGRMC1O00264 195 aaKnown RBP16.49■□□□□ 0.23
SSBP4-204ENST00000597724 CES2O00748 559 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 PPM1DO15297 605 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 RPLP0P05388 317 aaKnown RBP16.49■□□□□ 0.23
SSBP4-204ENST00000597724 PSMA3P25788 255 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 B4GALNT1Q00973 533 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 GTF2H3Q13889 308 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 SEPT6Q14141 434 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 SPIDRQ14159 915 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 NR1D2Q14995 579 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 CYP1B1Q16678 543 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 INSCQ1MX18 579 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 TTC27Q6P3X3 843 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 IYDQ6PHW0 289 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 SPRED1Q7Z699 444 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 TRAPPC5Q8IUR0 188 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 CCNJLQ8IV13 435 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 SFRP1Q8N474 314 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 RASGEF1AQ8N9B8 481 aa16.49■□□□□ 0.23
SSBP4-204ENST00000597724 Q8N9G6 341 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms